| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883383
Identifier: 218883383
GI number: 218883383
Start: 61825
End: 62841
Strand: Direct
Name: 218883383
Synonym: DKAM_0069
Alternate gene names: NA
Gene position: 61825-62841 (Clockwise)
Preceding gene: 218883381
Following gene: 218883386
Centisome position: 4.53
GC content: 41.3
Gene sequence:
>1017_bases ATGTATAAGCGGAAACTCCAGAAGATGGGTGTTACATCGCTAGGTATATCTCTTCCAAAGAAGTGGCTGCACTACTATAA TTTGAAGCAAGGGGATGAAGTAGAGGTGGAGATACTGCCGGATTACACACTACTGGTGAGGCCTTCATTCATTAAGGGTA ATGTAGGCTATAATTGTCAGATTCTCAGATATGATGGTGAAGCAGTAAACGAATCCATTATGAGGCTTATCTCGCTCTAT GTTAACGGTGTTGACTCCATTAAAGTCGTATGCGGAGATCAATGTGAAACATTCAAGGAGAGTATCTATAGGGTGCTCGA AAGAAACGTGATCGGGCTGGAAATCATCGAGGAGGGAAGAGACTATATCATGCTTGCATGTCTTGTTGACATATTATCCC TGCCCTTATCAGAGGTTCTGAGAAAAATGAGTATGCTGATACCGGCTTTACTAAGGGATTTAAAGAGGAACATGGAGACA AATACTCTCCTTGATATGGAGGAGAGAGATAGCTTAATAGATAAGCTATACCTATACGCAATCAGGCAGCTAAACATGGT ATTGCATGGTAAGCTCCTACTGGATAAAACAGGTTTAAAATCAATGGGAGAGGCGGTTTCTATAGCCAACCTACTTAAGA TACTTGAGAGGATGGGAGACCACATAGTGTTACTCCATAGATGGTATAATAATGCTAGAGGTAAAAAGGAGGTAGTCGAC AACGTTGTTATACTACTAGACGAAGTTATACCGATAACGGAGAAGATACTCAACAGCTACCTAGCCATACTCGAGAACCA GAGTAAAATACCCTCGATCGAGAAAACACTGTCGGAGCTAAGAATAGTTGAGGAGAAAATAAAGTCGTCGACCCTTGATG CAGGCCCATTGATAAGCCTTACACGTATGATAGCGTATCTAAGGGATATTATCGAAGTAGTAACCGATATAGTTGTAAGC AGGAAATTAAGGGAGTCAGCATGCGAAGAGGGAAAGCTAGTGGAATCCTATAAATAA
Upstream 100 bases:
>100_bases CAGGTTAAAGCATGGATATTATTACAGTTCTTACTGTAAGAAGCGTGTACAAACTATATTTACGGTATTTACTAATACGT ATTTAGAAGAGTGAGCACTT
Downstream 100 bases:
>100_bases TGATACTATATGATACAACATGGATGCAACGATATACGCTGTCGATGATGTAAGAAGCAATACTGAGAAAGCCAGCTTAA TGCTCTTAGTTTCCTCATAT
Product: phosphate uptake regulator PhoU
Products: NA
Alternate protein names: Phosphate Uptake Regulator; Phosphate Regulatory Protein; Transcription Regulator; SpoVT/AbrB Domain Protein; Regulatory Protein; Phosphate Regulatory Protein-Like; ABC Transport System Regulatory Protein; Phosphate Transport System Protein
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MYKRKLQKMGVTSLGISLPKKWLHYYNLKQGDEVEVEILPDYTLLVRPSFIKGNVGYNCQILRYDGEAVNESIMRLISLY VNGVDSIKVVCGDQCETFKESIYRVLERNVIGLEIIEEGRDYIMLACLVDILSLPLSEVLRKMSMLIPALLRDLKRNMET NTLLDMEERDSLIDKLYLYAIRQLNMVLHGKLLLDKTGLKSMGEAVSIANLLKILERMGDHIVLLHRWYNNARGKKEVVD NVVILLDEVIPITEKILNSYLAILENQSKIPSIEKTLSELRIVEEKIKSSTLDAGPLISLTRMIAYLRDIIEVVTDIVVS RKLRESACEEGKLVESYK
Sequences:
>Translated_338_residues MYKRKLQKMGVTSLGISLPKKWLHYYNLKQGDEVEVEILPDYTLLVRPSFIKGNVGYNCQILRYDGEAVNESIMRLISLY VNGVDSIKVVCGDQCETFKESIYRVLERNVIGLEIIEEGRDYIMLACLVDILSLPLSEVLRKMSMLIPALLRDLKRNMET NTLLDMEERDSLIDKLYLYAIRQLNMVLHGKLLLDKTGLKSMGEAVSIANLLKILERMGDHIVLLHRWYNNARGKKEVVD NVVILLDEVIPITEKILNSYLAILENQSKIPSIEKTLSELRIVEEKIKSSTLDAGPLISLTRMIAYLRDIIEVVTDIVVS RKLRESACEEGKLVESYK >Mature_338_residues MYKRKLQKMGVTSLGISLPKKWLHYYNLKQGDEVEVEILPDYTLLVRPSFIKGNVGYNCQILRYDGEAVNESIMRLISLY VNGVDSIKVVCGDQCETFKESIYRVLERNVIGLEIIEEGRDYIMLACLVDILSLPLSEVLRKMSMLIPALLRDLKRNMET NTLLDMEERDSLIDKLYLYAIRQLNMVLHGKLLLDKTGLKSMGEAVSIANLLKILERMGDHIVLLHRWYNNARGKKEVVD NVVILLDEVIPITEKILNSYLAILENQSKIPSIEKTLSELRIVEEKIKSSTLDAGPLISLTRMIAYLRDIIEVVTDIVVS RKLRESACEEGKLVESYK
Specific function: Unknown
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38691; Mature: 38691
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKRKLQKMGVTSLGISLPKKWLHYYNLKQGDEVEVEILPDYTLLVRPSFIKGNVGYNCQ CCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCEECCCCCEEE ILRYDGEAVNESIMRLISLYVNGVDSIKVVCGDQCETFKESIYRVLERNVIGLEIIEEGR EEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHCCC DYIMLACLVDILSLPLSEVLRKMSMLIPALLRDLKRNMETNTLLDMEERDSLIDKLYLYA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHH IRQLNMVLHGKLLLDKTGLKSMGEAVSIANLLKILERMGDHIVLLHRWYNNARGKKEVVD HHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCHHHHHH NVVILLDEVIPITEKILNSYLAILENQSKIPSIEKTLSELRIVEEKIKSSTLDAGPLISL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH TRMIAYLRDIIEVVTDIVVSRKLRESACEEGKLVESYK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MYKRKLQKMGVTSLGISLPKKWLHYYNLKQGDEVEVEILPDYTLLVRPSFIKGNVGYNCQ CCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCEECCCCCEEE ILRYDGEAVNESIMRLISLYVNGVDSIKVVCGDQCETFKESIYRVLERNVIGLEIIEEGR EEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHCCC DYIMLACLVDILSLPLSEVLRKMSMLIPALLRDLKRNMETNTLLDMEERDSLIDKLYLYA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHH IRQLNMVLHGKLLLDKTGLKSMGEAVSIANLLKILERMGDHIVLLHRWYNNARGKKEVVD HHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCHHHHHH NVVILLDEVIPITEKILNSYLAILENQSKIPSIEKTLSELRIVEEKIKSSTLDAGPLISL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH TRMIAYLRDIIEVVTDIVVSRKLRESACEEGKLVESYK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA