| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218883377
Identifier: 218883377
GI number: 218883377
Start: 57466
End: 58074
Strand: Reverse
Name: 218883377
Synonym: DKAM_0063
Alternate gene names: NA
Gene position: 58074-57466 (Counterclockwise)
Preceding gene: 218883378
Following gene: 218883376
Centisome position: 4.25
GC content: 40.07
Gene sequence:
>609_bases GTGAACCCGGATCTACTTAGGTTGAGGAACCAGGTGGCAAAACTATATCTCGAAGCACTAGAAGTGATCAGGGACTTAAT GAAGCTACTTGACTCAGATAAGGATAGTAGAGAAGTATTAGAGAAGGAGCTGAATGAAAAGATCGAAGTGATATCTATCT CGCGTATCGAGTTAATAAATAACATACTAGTCTTCATAGCTAGAAACCAGCCGCTAGGCTTAGAACTCGTTGAGGCAAGT AATCTACTATACCTGGTCTACGATATATACCGGTTCGGTAGATATGCTAGAGAGATATTCCTAACCGATAAGAAAGGCGT TAGACTATCAACACCGGAGTTAAGGGATCTAGTAGAGCCAGGGCTGAAAATAGCTGTTGAAGCAGTAGAGAAGTCTTACA AAGCATACTTTGAGAACTGTACTTGGTGTATTGAAGAGGTGAGGAGGCTCGGCGTGGAATCAGATAAACTATATATTAAG CAGTTAGAGAAGATATCGGCCAATAAAGTAATCAACAACGTTGATGCGATAGCATTACTTGTTTTAAGACATATAGAGAG AATAGTGGATCACGCTGAAAGAGTCTCAACACTTTCAACGAATATATAG
Upstream 100 bases:
>100_bases GTTATATAATGGAGGAATAGTTGAAGAAGGGCCTGTAAACGATGTATTCATACATCCAAGACACGAGGTAACTATCAAAC TACTCGAGAGGGTGTTCTAA
Downstream 100 bases:
>100_bases GAATCCACTCTTAACACTTGAAACCGTATACCTTATCAACAGGCAACCGAGCTCCTCCAGGGCTTTACAGTCGATAGCAC TCGTTGAACTGGTTCACGGG
Product: phosphate transport system protein PhoU
Products: NA
Alternate protein names: Phosphate Uptake Regulator PhoU
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MNPDLLRLRNQVAKLYLEALEVIRDLMKLLDSDKDSREVLEKELNEKIEVISISRIELINNILVFIARNQPLGLELVEAS NLLYLVYDIYRFGRYAREIFLTDKKGVRLSTPELRDLVEPGLKIAVEAVEKSYKAYFENCTWCIEEVRRLGVESDKLYIK QLEKISANKVINNVDAIALLVLRHIERIVDHAERVSTLSTNI
Sequences:
>Translated_202_residues MNPDLLRLRNQVAKLYLEALEVIRDLMKLLDSDKDSREVLEKELNEKIEVISISRIELINNILVFIARNQPLGLELVEAS NLLYLVYDIYRFGRYAREIFLTDKKGVRLSTPELRDLVEPGLKIAVEAVEKSYKAYFENCTWCIEEVRRLGVESDKLYIK QLEKISANKVINNVDAIALLVLRHIERIVDHAERVSTLSTNI >Mature_202_residues MNPDLLRLRNQVAKLYLEALEVIRDLMKLLDSDKDSREVLEKELNEKIEVISISRIELINNILVFIARNQPLGLELVEAS NLLYLVYDIYRFGRYAREIFLTDKKGVRLSTPELRDLVEPGLKIAVEAVEKSYKAYFENCTWCIEEVRRLGVESDKLYIK QLEKISANKVINNVDAIALLVLRHIERIVDHAERVSTLSTNI
Specific function: Unknown
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23428; Mature: 23428
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPDLLRLRNQVAKLYLEALEVIRDLMKLLDSDKDSREVLEKELNEKIEVISISRIELIN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NILVFIARNQPLGLELVEASNLLYLVYDIYRFGRYAREIFLTDKKGVRLSTPELRDLVEP HHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHCC GLKIAVEAVEKSYKAYFENCTWCIEEVRRLGVESDKLYIKQLEKISANKVINNVDAIALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VLRHIERIVDHAERVSTLSTNI HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNPDLLRLRNQVAKLYLEALEVIRDLMKLLDSDKDSREVLEKELNEKIEVISISRIELIN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NILVFIARNQPLGLELVEASNLLYLVYDIYRFGRYAREIFLTDKKGVRLSTPELRDLVEP HHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHCC GLKIAVEAVEKSYKAYFENCTWCIEEVRRLGVESDKLYIKQLEKISANKVINNVDAIALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VLRHIERIVDHAERVSTLSTNI HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA