Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883350

Identifier: 218883350

GI number: 218883350

Start: 32416

End: 33129

Strand: Reverse

Name: 218883350

Synonym: DKAM_0036

Alternate gene names: NA

Gene position: 33129-32416 (Counterclockwise)

Preceding gene: 218883353

Following gene: 218883349

Centisome position: 2.43

GC content: 43.42

Gene sequence:

>714_bases
ATGGGTGAAATCAATCCTACCGGAGAAGCCACCAATATAGGTACTAGTGGATCCGGAGATGTCTTAATCGATTTGTCAAA
CATACCTTTGAAGCCGCTTGGCAAACGCGAGATAAGCCAGCTTGAAATGGCCCTGATAATAGGCACGCTCTACAGGCCGG
AAATCCTTGAATTAATACATGATCCTGTAGAGAGGTCTACATGGGTTGACAGCCTGGCGGTGGCGGCTGGAGCATATGCC
AGAATGAAGGCTGGATTACCCGTCAGCCAGATAGCTGAGGAACTAGGAAGAAGCGAGACCACTATAAGGAGCCATTTAAA
CATGAAGACAAAGGCTGGTAAACTAATCCATGAAACATACGAGAAACTCAAGAAAGGGGAGTTAAAGCTACTCATACCAT
TCATCAAGGCCCCTGCTGCAGGCTTTGAAGACCAAATCAAGGTGCTTAAGGAGGAAATTGAGAAACAAAGGGAGAAAAAC
AAACAGCTCGAGGCCAGGGTCAATGAGTTAACAGAGTTGTTGAAGCATAGGGAGAATGAGGTACAAGCACTCAAAGAAGA
GGTTAATAGGCTTCAAAACGAGCTGGAAGCGAAGAATAAGGAGTTAAATACATGCATAGATAACAATAGATTACTTAAGG
ATAAAATAGATGGGTTCATGAAAAACCTTTATAAAGTACTCGAGGAACTACAGAGCACTATTAACACAGGGTAA

Upstream 100 bases:

>100_bases
TCACGGATATTATTTGTTCTCTCTGAAGAATAATTATCGATCACAAGAGCAGGGATGATTTTAAATCCTGATATATAGAG
TAATAATATATGGTGGGAAA

Downstream 100 bases:

>100_bases
TAATAAGCCCCCTCTTTTAAAAAAGGTGCCTCCCTGATCCACCGATAGGGGGTTGAATGAGCTTTATACTTGTAAAGATG
GATGAGAATGGCAGAGTACT

Product: transcriptional regulator-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MGEINPTGEATNIGTSGSGDVLIDLSNIPLKPLGKREISQLEMALIIGTLYRPEILELIHDPVERSTWVDSLAVAAGAYA
RMKAGLPVSQIAEELGRSETTIRSHLNMKTKAGKLIHETYEKLKKGELKLLIPFIKAPAAGFEDQIKVLKEEIEKQREKN
KQLEARVNELTELLKHRENEVQALKEEVNRLQNELEAKNKELNTCIDNNRLLKDKIDGFMKNLYKVLEELQSTINTG

Sequences:

>Translated_237_residues
MGEINPTGEATNIGTSGSGDVLIDLSNIPLKPLGKREISQLEMALIIGTLYRPEILELIHDPVERSTWVDSLAVAAGAYA
RMKAGLPVSQIAEELGRSETTIRSHLNMKTKAGKLIHETYEKLKKGELKLLIPFIKAPAAGFEDQIKVLKEEIEKQREKN
KQLEARVNELTELLKHRENEVQALKEEVNRLQNELEAKNKELNTCIDNNRLLKDKIDGFMKNLYKVLEELQSTINTG
>Mature_236_residues
GEINPTGEATNIGTSGSGDVLIDLSNIPLKPLGKREISQLEMALIIGTLYRPEILELIHDPVERSTWVDSLAVAAGAYAR
MKAGLPVSQIAEELGRSETTIRSHLNMKTKAGKLIHETYEKLKKGELKLLIPFIKAPAAGFEDQIKVLKEEIEKQREKNK
QLEARVNELTELLKHRENEVQALKEEVNRLQNELEAKNKELNTCIDNNRLLKDKIDGFMKNLYKVLEELQSTINTG

Specific function: Unknown

COG id: COG1318

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022285
- InterPro:   IPR011991 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26649; Mature: 26518

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEINPTGEATNIGTSGSGDVLIDLSNIPLKPLGKREISQLEMALIIGTLYRPEILELIH
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
DPVERSTWVDSLAVAAGAYARMKAGLPVSQIAEELGRSETTIRSHLNMKTKAGKLIHETY
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH
EKLKKGELKLLIPFIKAPAAGFEDQIKVLKEEIEKQREKNKQLEARVNELTELLKHRENE
HHHHCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQALKEEVNRLQNELEAKNKELNTCIDNNRLLKDKIDGFMKNLYKVLEELQSTINTG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GEINPTGEATNIGTSGSGDVLIDLSNIPLKPLGKREISQLEMALIIGTLYRPEILELIH
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
DPVERSTWVDSLAVAAGAYARMKAGLPVSQIAEELGRSETTIRSHLNMKTKAGKLIHETY
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH
EKLKKGELKLLIPFIKAPAAGFEDQIKVLKEEIEKQREKNKQLEARVNELTELLKHRENE
HHHHCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQALKEEVNRLQNELEAKNKELNTCIDNNRLLKDKIDGFMKNLYKVLEELQSTINTG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]