| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883331
Identifier: 218883331
GI number: 218883331
Start: 14176
End: 14526
Strand: Direct
Name: 218883331
Synonym: DKAM_0017
Alternate gene names: NA
Gene position: 14176-14526 (Clockwise)
Preceding gene: 218883328
Following gene: 218883334
Centisome position: 1.04
GC content: 43.02
Gene sequence:
>351_bases ATGGTAAAAGAGATGTTTGAGAAGGCTGAGCAGAATTATAAGGAGCTGGATAGACTGGCGTTGATCACTCTTTCCAGGCT AGCTTTCCAACACATGGGGAAGACTATTGAGGCATTCGACCAGTGGTTAAAAGATCCCATGATAACCAGCCATATGCCTA GGGAGATGCTGGTTGAACTATGGTCTAAGCTAAGGATTATACTCTACGAGTTAATAGAGCTAGATATCGAGCACACCAGC AAGTTCAGTGAGCATCTAAGAAAACTAGCGGAGGAAAACGCGCTGAATCCATTATTTGCATTCGAGAAAGAGGAAAAAGA AACTAGGAGAGGCGTTTCTCCAACCATATAA
Upstream 100 bases:
>100_bases AGTAAAGTATAAAGTAGCATTAATACCTTGAAAATGTTAAGGGTGAATTGGAATGGATGGGTTTTTCAGCAACTTAGAGT CATGGGTGAAAAGGCAGAAC
Downstream 100 bases:
>100_bases TTGTGTTATAGTCTTCTCTTGGTTTTTACATCTACCTCGACATCGAGGGGTTGTATCTTAGGCTTTAAATCACTGAATAA CTTCTTAATGGTTTCAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MVKEMFEKAEQNYKELDRLALITLSRLAFQHMGKTIEAFDQWLKDPMITSHMPREMLVELWSKLRIILYELIELDIEHTS KFSEHLRKLAEENALNPLFAFEKEEKETRRGVSPTI
Sequences:
>Translated_116_residues MVKEMFEKAEQNYKELDRLALITLSRLAFQHMGKTIEAFDQWLKDPMITSHMPREMLVELWSKLRIILYELIELDIEHTS KFSEHLRKLAEENALNPLFAFEKEEKETRRGVSPTI >Mature_116_residues MVKEMFEKAEQNYKELDRLALITLSRLAFQHMGKTIEAFDQWLKDPMITSHMPREMLVELWSKLRIILYELIELDIEHTS KFSEHLRKLAEENALNPLFAFEKEEKETRRGVSPTI
Specific function: Unknown
COG id: COG4755
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13835; Mature: 13835
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKEMFEKAEQNYKELDRLALITLSRLAFQHMGKTIEAFDQWLKDPMITSHMPREMLVEL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHCCCHHHHHHH WSKLRIILYELIELDIEHTSKFSEHLRKLAEENALNPLFAFEKEEKETRRGVSPTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVKEMFEKAEQNYKELDRLALITLSRLAFQHMGKTIEAFDQWLKDPMITSHMPREMLVEL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHCCCHHHHHHH WSKLRIILYELIELDIEHTSKFSEHLRKLAEENALNPLFAFEKEEKETRRGVSPTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA