| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883323
Identifier: 218883323
GI number: 218883323
Start: 6913
End: 7767
Strand: Direct
Name: 218883323
Synonym: DKAM_0009
Alternate gene names: NA
Gene position: 6913-7767 (Clockwise)
Preceding gene: 218883322
Following gene: 218883324
Centisome position: 0.51
GC content: 43.98
Gene sequence:
>855_bases ATGAATAAGAGAGTTGCTGGCGTGGTATCGCTGGTGGTTGCGACTATACTTTGGGGTTCATCCTTCTCATTCATTAAGTT ATCGGTAACAGACGTATCTCCTCTAACTTACTCATCTCTCAGATCATTTATCGCAGTAATATTGTTGACACCGATTATAT TATTGAAAATGTATAGGGGAGTACTATCCATTAACAGCCTATATAAGGGGTTCATCGTGGGCATAGCATATTTCCTTGGC TTGTTCCTTCAAGCAGCTGGAACAGTATATACAACACCATCTCTCAGCGCCTTCATAACCGGGCTTAACTCTGTACATGT CCACCTATATATCGCACTCGTTGAAAGGAACTATGGTTTAATAGATGGTATAGCCCTTCTTTTAGCACTCTCCGGCCTAT ATGTGTTAACCTCTCCGAGCGGTGGGTTAACCATAGGTGTGCTCCTTATTTTCATAGGATCTATTGCCTGGGCAGCCCAG ATAATCCTGGTTTCCCGCTATGGATCCTCTAGTATAATAGAGATATTGTATGGCATGTTCTTACCGGGTGCGCTCACCTA TCCCTTTGCATTAATTCTCGGGGGAGCTGTGGGCATCGAGGCTTTGATTTATATAACTTATCTCGCCGTAGCCTGCTCGG TTCTGGCAACTTTTTTCCAGGTATGGGGTCAGAGATATGTTTCCCCTCTAACAGCTGCACTAATATTCCTGCTTGAACCA GTTTTTGCCCTACTCTTCTCGCTGGCGATGGGGTTGGAGGGAATTGAACCATATAAAGTAATCGGGGGAGGATTAATAGT AATAGCCACCTACCTCTCATCTATGGCCGAGTTATCCTCTAACTGGTTGAAATAA
Upstream 100 bases:
>100_bases CTACTTGACTAATACTTTAAATTAAATGTGCTTCATATAATTTATTATGTGAAAACACGATGTCTCTTAATCAACTTAGA GCAGACTTATAGGTGTCTCC
Downstream 100 bases:
>100_bases AGAGTGGCATCCCTAAGTATAGCCATTCCGATGTTTCGACTTAAATTTATTTACTTAGCTAAGGTAATATTAAATCAAAG AAGTGGAGGGTATTCCTTGA
Product: Permease of the drug/metabolite transporter (DMT) superfamily
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MNKRVAGVVSLVVATILWGSSFSFIKLSVTDVSPLTYSSLRSFIAVILLTPIILLKMYRGVLSINSLYKGFIVGIAYFLG LFLQAAGTVYTTPSLSAFITGLNSVHVHLYIALVERNYGLIDGIALLLALSGLYVLTSPSGGLTIGVLLIFIGSIAWAAQ IILVSRYGSSSIIEILYGMFLPGALTYPFALILGGAVGIEALIYITYLAVACSVLATFFQVWGQRYVSPLTAALIFLLEP VFALLFSLAMGLEGIEPYKVIGGGLIVIATYLSSMAELSSNWLK
Sequences:
>Translated_284_residues MNKRVAGVVSLVVATILWGSSFSFIKLSVTDVSPLTYSSLRSFIAVILLTPIILLKMYRGVLSINSLYKGFIVGIAYFLG LFLQAAGTVYTTPSLSAFITGLNSVHVHLYIALVERNYGLIDGIALLLALSGLYVLTSPSGGLTIGVLLIFIGSIAWAAQ IILVSRYGSSSIIEILYGMFLPGALTYPFALILGGAVGIEALIYITYLAVACSVLATFFQVWGQRYVSPLTAALIFLLEP VFALLFSLAMGLEGIEPYKVIGGGLIVIATYLSSMAELSSNWLK >Mature_284_residues MNKRVAGVVSLVVATILWGSSFSFIKLSVTDVSPLTYSSLRSFIAVILLTPIILLKMYRGVLSINSLYKGFIVGIAYFLG LFLQAAGTVYTTPSLSAFITGLNSVHVHLYIALVERNYGLIDGIALLLALSGLYVLTSPSGGLTIGVLLIFIGSIAWAAQ IILVSRYGSSSIIEILYGMFLPGALTYPFALILGGAVGIEALIYITYLAVACSVLATFFQVWGQRYVSPLTAALIFLLEP VFALLFSLAMGLEGIEPYKVIGGGLIVIATYLSSMAELSSNWLK
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 30374; Mature: 30374
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKRVAGVVSLVVATILWGSSFSFIKLSVTDVSPLTYSSLRSFIAVILLTPIILLKMYRG CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VLSINSLYKGFIVGIAYFLGLFLQAAGTVYTTPSLSAFITGLNSVHVHLYIALVERNYGL HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHCCCHHHHEEEEEEECCCCCH IDGIALLLALSGLYVLTSPSGGLTIGVLLIFIGSIAWAAQIILVSRYGSSSIIEILYGMF HHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LPGALTYPFALILGGAVGIEALIYITYLAVACSVLATFFQVWGQRYVSPLTAALIFLLEP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFALLFSLAMGLEGIEPYKVIGGGLIVIATYLSSMAELSSNWLK HHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKRVAGVVSLVVATILWGSSFSFIKLSVTDVSPLTYSSLRSFIAVILLTPIILLKMYRG CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VLSINSLYKGFIVGIAYFLGLFLQAAGTVYTTPSLSAFITGLNSVHVHLYIALVERNYGL HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHCCCHHHHEEEEEEECCCCCH IDGIALLLALSGLYVLTSPSGGLTIGVLLIFIGSIAWAAQIILVSRYGSSSIIEILYGMF HHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LPGALTYPFALILGGAVGIEALIYITYLAVACSVLATFFQVWGQRYVSPLTAALIFLLEP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFALLFSLAMGLEGIEPYKVIGGGLIVIATYLSSMAELSSNWLK HHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]