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The map label for this gene is 218533255

Identifier: 218533255

GI number: 218533255

Start: 5776005

End: 5777804

Strand: Reverse

Name: 218533255

Synonym: Mchl_5385

Alternate gene names: NA

Gene position: 5777804-5776005 (Counterclockwise)

Preceding gene: NA

Following gene: 218533254

Centisome position: 100.0

GC content: 64.61

Gene sequence:

>1800_bases
GTGAAGCGGGTTAAGGGGACCAAGTATCTCTACAGGCGTGGCGATGGGTATGTCGCGCGCATGGGTGTGCCAGCCGCTCT
CCGGTCGATCGTAGGCAAAACCGAGCTCCAGGAAACGCTCGGGTCGATTCTCAAGATCGCTGAGCGTGACATTCACGGTG
TCGTCGCCGTCTTCCATCAGACGCTCGCCGACGCTCGCGCCAAGCTCGATGTCTCAGCATCACCGCCGCCCCGGATGCGG
GCGAGACCACTGACGCTCGACCAGATCGCTCATACGCACTACGCCGAAGAACTGGACCACGATCAGCGCCTACGTGTGGG
CAACCGGACCACACCGGATTGGCCAATCGAGTGGGAAGTCCGCCTCGACGGGCTCCCGACCAAGGTAGAAGTCCCGGCCG
AGGATGAGCCGGTGAACGTGCGCTCGCTTAAATCGCCGCTGACGCTCTATCAGGAGCGCGCCGCTCGCGAGCGAGCAGAA
CGAACTCAGCCGACCGAGGGGCGCCGACAGGGCTTCAAGGCCCCATCGACTAGCTACCGACAGCAACAGGTCCTTGCCCT
TCGACGGATCGCAAGTGGACAGTTTGAAGACGACGAAGAACTACAGGCCATCGTCGGCTTGGCGATTGACAAGTTCCAGG
CACGCGGCAGCACGGATGTCGAGTTCGGGACCGAGGCGTGGCGCGAACTCGGACTGCTCCTGGCAAAGGTCCAACTCGCA
GCCCTCGAAGCCACGATCGAGCGCGATGCCGGCGGCGAGCCAGCAGCGCCCAAGCTTCCGATCCTGGCCGAGCCACCGTC
TACCGGCCAGGTTGTCCCGATCCGTCCGCGTGGGCCAGCGCTGTCCATCCTCGGCCTACTGGACGGCTACCTCCGGATGA
AGCAGTCGCAGGGGAAGGGAGCTGAAGCCGAGCGCCGCTGGAAGCCGGTGTTCAAGGCGCTCGTTCGCCATCTAGGGCAC
GACGACGCCCGGCACCTTACAAAGAGCGACATCATGGGTTGGCGGGACCATCTGCTCGAGAAGGAGGGACTGGCAGCGAA
AACGGTTCGGGACGTCCATCTTGCCTCGCTCCGCGCAGTGCTGGGTTGGGCCGCTGACGACGAGAAGATCCCGGAGAACC
CGGCCGCACGTGTGCGCATCGACGTGGAGAAGAAGGTTAGCGTCCGAGAGCAGGGGCTCAACGATGCTGAGGCCGTCGCG
GTCCTCAAGGCAGCGCTCGCCTACCAGCCACCCACCGCACATTCACCGGCGACCCGTGAGAGCAGCTTCGTGACCGCAGC
GAAGCGCTGGCTTCCCTGGCTCTGCGCACTGACCGGCGCCCGCGTCGCAGAGATGGGTGCGATTCGGGTGCAGGACGTCA
TCACCGATAAGGGCATCACCTACATTCGCATCACGCCAGATGCAGGCCCCGTGAAGTCCGGACAATATCGCGACGTCCCG
GTGCATCCCCAGCTTGTCGAGTTGGGGTTCCTCGACTTCGTGAAGGCCGTCGGCGACGGGCCGCTCTTCTATGATGCGAC
CAAGCATCGGAAGGAGGACGCCCAGCATCCTTCCAAGATCGTCGCCGCGCGCGTCAGCACATGGGTCCGGAACCTCGGGC
TGATCGATGAGGCCGTGAGCCCGTCCCACGGCTGGCGACACCGCTTCAAGACGGTCGGACGGGAGGCAGAAATCAGCGAC
CGCGTGCTCGACGCTCTGCAAGGGCACGCGGGGCGGACTGCCGGCGACAACTATGGCGACGTCACGCTCAAGACCCGCGA
TGCGGCGATCCGCAGGATGCCCGCCTACAACGTCGAGTGA

Upstream 100 bases:

>100_bases
CCCCTTGATCCCGTTAAAAGTCGTTGCGCTGTAAGCGCTTTCGTCCAACGTGACGCTACAAAGCGCGCTCCAAAGCGTGC
GGCTCACAGAGGACTGGGCG

Downstream 100 bases:

>100_bases
ATGTGCCGGAATGCGTGCTCCACGGCCGCGTCGAGCAATTGTGCAGATCGTCGGAGATCGACCGAAATACCAGATGCTCG
CGGTCACTGTCGCTTCGTCA

Product: integrase family protein

Products: NA

Alternate protein names: Phage Integrase; Phage Integrase Family Protein; Integrase; Integrase Domain-Containing Protein; Phage Integrase Family Recombinase Protein; Site-Specific Recombinase Phage Integrase Family Protein; Integrase Domain Protein SAM Domain Protein

Number of amino acids: Translated: 599; Mature: 599

Protein sequence:

>599_residues
MKRVKGTKYLYRRGDGYVARMGVPAALRSIVGKTELQETLGSILKIAERDIHGVVAVFHQTLADARAKLDVSASPPPRMR
ARPLTLDQIAHTHYAEELDHDQRLRVGNRTTPDWPIEWEVRLDGLPTKVEVPAEDEPVNVRSLKSPLTLYQERAARERAE
RTQPTEGRRQGFKAPSTSYRQQQVLALRRIASGQFEDDEELQAIVGLAIDKFQARGSTDVEFGTEAWRELGLLLAKVQLA
ALEATIERDAGGEPAAPKLPILAEPPSTGQVVPIRPRGPALSILGLLDGYLRMKQSQGKGAEAERRWKPVFKALVRHLGH
DDARHLTKSDIMGWRDHLLEKEGLAAKTVRDVHLASLRAVLGWAADDEKIPENPAARVRIDVEKKVSVREQGLNDAEAVA
VLKAALAYQPPTAHSPATRESSFVTAAKRWLPWLCALTGARVAEMGAIRVQDVITDKGITYIRITPDAGPVKSGQYRDVP
VHPQLVELGFLDFVKAVGDGPLFYDATKHRKEDAQHPSKIVAARVSTWVRNLGLIDEAVSPSHGWRHRFKTVGREAEISD
RVLDALQGHAGRTAGDNYGDVTLKTRDAAIRRMPAYNVE

Sequences:

>Translated_599_residues
MKRVKGTKYLYRRGDGYVARMGVPAALRSIVGKTELQETLGSILKIAERDIHGVVAVFHQTLADARAKLDVSASPPPRMR
ARPLTLDQIAHTHYAEELDHDQRLRVGNRTTPDWPIEWEVRLDGLPTKVEVPAEDEPVNVRSLKSPLTLYQERAARERAE
RTQPTEGRRQGFKAPSTSYRQQQVLALRRIASGQFEDDEELQAIVGLAIDKFQARGSTDVEFGTEAWRELGLLLAKVQLA
ALEATIERDAGGEPAAPKLPILAEPPSTGQVVPIRPRGPALSILGLLDGYLRMKQSQGKGAEAERRWKPVFKALVRHLGH
DDARHLTKSDIMGWRDHLLEKEGLAAKTVRDVHLASLRAVLGWAADDEKIPENPAARVRIDVEKKVSVREQGLNDAEAVA
VLKAALAYQPPTAHSPATRESSFVTAAKRWLPWLCALTGARVAEMGAIRVQDVITDKGITYIRITPDAGPVKSGQYRDVP
VHPQLVELGFLDFVKAVGDGPLFYDATKHRKEDAQHPSKIVAARVSTWVRNLGLIDEAVSPSHGWRHRFKTVGREAEISD
RVLDALQGHAGRTAGDNYGDVTLKTRDAAIRRMPAYNVE
>Mature_599_residues
MKRVKGTKYLYRRGDGYVARMGVPAALRSIVGKTELQETLGSILKIAERDIHGVVAVFHQTLADARAKLDVSASPPPRMR
ARPLTLDQIAHTHYAEELDHDQRLRVGNRTTPDWPIEWEVRLDGLPTKVEVPAEDEPVNVRSLKSPLTLYQERAARERAE
RTQPTEGRRQGFKAPSTSYRQQQVLALRRIASGQFEDDEELQAIVGLAIDKFQARGSTDVEFGTEAWRELGLLLAKVQLA
ALEATIERDAGGEPAAPKLPILAEPPSTGQVVPIRPRGPALSILGLLDGYLRMKQSQGKGAEAERRWKPVFKALVRHLGH
DDARHLTKSDIMGWRDHLLEKEGLAAKTVRDVHLASLRAVLGWAADDEKIPENPAARVRIDVEKKVSVREQGLNDAEAVA
VLKAALAYQPPTAHSPATRESSFVTAAKRWLPWLCALTGARVAEMGAIRVQDVITDKGITYIRITPDAGPVKSGQYRDVP
VHPQLVELGFLDFVKAVGDGPLFYDATKHRKEDAQHPSKIVAARVSTWVRNLGLIDEAVSPSHGWRHRFKTVGREAEISD
RVLDALQGHAGRTAGDNYGDVTLKTRDAAIRRMPAYNVE

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66307; Mature: 66307

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVKGTKYLYRRGDGYVARMGVPAALRSIVGKTELQETLGSILKIAERDIHGVVAVFHQ
CCCCCCCHHHEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLADARAKLDVSASPPPRMRARPLTLDQIAHTHYAEELDHDQRLRVGNRTTPDWPIEWEV
HHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEEEEE
RLDGLPTKVEVPAEDEPVNVRSLKSPLTLYQERAARERAERTQPTEGRRQGFKAPSTSYR
EECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHH
QQQVLALRRIASGQFEDDEELQAIVGLAIDKFQARGSTDVEFGTEAWRELGLLLAKVQLA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
ALEATIERDAGGEPAAPKLPILAEPPSTGQVVPIRPRGPALSILGLLDGYLRMKQSQGKG
HHHHHHHHCCCCCCCCCCCCEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCC
AEAERRWKPVFKALVRHLGHDDARHLTKSDIMGWRDHLLEKEGLAAKTVRDVHLASLRAV
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LGWAADDEKIPENPAARVRIDVEKKVSVREQGLNDAEAVAVLKAALAYQPPTAHSPATRE
HHCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
SSFVTAAKRWLPWLCALTGARVAEMGAIRVQDVITDKGITYIRITPDAGPVKSGQYRDVP
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCC
VHPQLVELGFLDFVKAVGDGPLFYDATKHRKEDAQHPSKIVAARVSTWVRNLGLIDEAVS
CCHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHCC
PSHGWRHRFKTVGREAEISDRVLDALQGHAGRTAGDNYGDVTLKTRDAAIRRMPAYNVE
CCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCCC
>Mature Secondary Structure
MKRVKGTKYLYRRGDGYVARMGVPAALRSIVGKTELQETLGSILKIAERDIHGVVAVFHQ
CCCCCCCHHHEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLADARAKLDVSASPPPRMRARPLTLDQIAHTHYAEELDHDQRLRVGNRTTPDWPIEWEV
HHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEEEEE
RLDGLPTKVEVPAEDEPVNVRSLKSPLTLYQERAARERAERTQPTEGRRQGFKAPSTSYR
EECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHH
QQQVLALRRIASGQFEDDEELQAIVGLAIDKFQARGSTDVEFGTEAWRELGLLLAKVQLA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
ALEATIERDAGGEPAAPKLPILAEPPSTGQVVPIRPRGPALSILGLLDGYLRMKQSQGKG
HHHHHHHHCCCCCCCCCCCCEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCC
AEAERRWKPVFKALVRHLGHDDARHLTKSDIMGWRDHLLEKEGLAAKTVRDVHLASLRAV
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LGWAADDEKIPENPAARVRIDVEKKVSVREQGLNDAEAVAVLKAALAYQPPTAHSPATRE
HHCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
SSFVTAAKRWLPWLCALTGARVAEMGAIRVQDVITDKGITYIRITPDAGPVKSGQYRDVP
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCC
VHPQLVELGFLDFVKAVGDGPLFYDATKHRKEDAQHPSKIVAARVSTWVRNLGLIDEAVS
CCHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHCC
PSHGWRHRFKTVGREAEISDRVLDALQGHAGRTAGDNYGDVTLKTRDAAIRRMPAYNVE
CCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA