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The map label for this gene is omp16 [H]

Identifier: 218533185

GI number: 218533185

Start: 5690668

End: 5691180

Strand: Reverse

Name: omp16 [H]

Synonym: Mchl_5311

Alternate gene names: 218533185

Gene position: 5691180-5690668 (Counterclockwise)

Preceding gene: 218533186

Following gene: 218533184

Centisome position: 98.5

GC content: 69.01

Gene sequence:

>513_bases
ATGTCGACACCCGCGCGTTTCCGTGGGCTTTCCCTGACGCTGGCGCTTTGCGCCGCACTCGGCCTCGGCGCCTGCAGCAA
GGACAGCGATCTTGCCGACGCGTCCGGCTTCGGTGCCGGCGGCCCCGGAGGCGCGGCCCGCCCCGGCAGCGCCCAGGATT
TCGTGGTGAATATCGGCGACCGGGTGTTCTTCGAATCCGACTCGACCGATCTCACCCCGACCGCGACTGCCACCCTCGAC
AAGCAGGCATCGTGGCTCCAGCGCTACCCGCGCTACAGCTTCCTCATCGAGGGCCATGCCGACGAGCGCGGCACGCGGGA
ATACAATTATTCCCTCGGCGCCCGCCGCGCACAGACCGTGCAGGATTACCTCGCCTCCCGCGGCATCTCGGCCTCGCGGA
TGCGGACGGTCTCCTACGGCAAGGAGCGCCCGGTGGCGGTCTGCAACGACATCTCCTGCTGGTCGCAGAACCGCCGCTCC
GTCAGCGTTCTGGACGGCGGCGCCGGCTCCTAA

Upstream 100 bases:

>100_bases
GCGCCTTCAAACCGAGATTCGGAGCCGGCCCCGATCGCCAGACGATCGGAGCGGGCGCCGGCAGGACAACCGGCACGGCT
CGGCCGTGAGGAGAGAGACG

Downstream 100 bases:

>100_bases
GACGGGTGCGGGCCCGGTTTTGCGGCCGACCGGGCCATCTGCTATCGGGTAAGCGTGCCTCATCGAACTGCCGGTCGTCG
ACCGTCGCCGCTCCGGCCGC

Product: peptidoglycan-associated lipoprotein

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MSTPARFRGLSLTLALCAALGLGACSKDSDLADASGFGAGGPGGAARPGSAQDFVVNIGDRVFFESDSTDLTPTATATLD
KQASWLQRYPRYSFLIEGHADERGTREYNYSLGARRAQTVQDYLASRGISASRMRTVSYGKERPVAVCNDISCWSQNRRS
VSVLDGGAGS

Sequences:

>Translated_170_residues
MSTPARFRGLSLTLALCAALGLGACSKDSDLADASGFGAGGPGGAARPGSAQDFVVNIGDRVFFESDSTDLTPTATATLD
KQASWLQRYPRYSFLIEGHADERGTREYNYSLGARRAQTVQDYLASRGISASRMRTVSYGKERPVAVCNDISCWSQNRRS
VSVLDGGAGS
>Mature_169_residues
STPARFRGLSLTLALCAALGLGACSKDSDLADASGFGAGGPGGAARPGSAQDFVVNIGDRVFFESDSTDLTPTATATLDK
QASWLQRYPRYSFLIEGHADERGTREYNYSLGARRAQTVQDYLASRGISASRMRTVSYGKERPVAVCNDISCWSQNRRSV
SVLDGGAGS

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=175, Percent_Identity=34.8571428571429, Blast_Score=105, Evalue=1e-24,
Organism=Escherichia coli, GI48994946, Length=110, Percent_Identity=32.7272727272727, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 18041; Mature: 17910

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPARFRGLSLTLALCAALGLGACSKDSDLADASGFGAGGPGGAARPGSAQDFVVNIGD
CCCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
RVFFESDSTDLTPTATATLDKQASWLQRYPRYSFLIEGHADERGTREYNYSLGARRAQTV
EEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCHHHHHH
QDYLASRGISASRMRTVSYGKERPVAVCNDISCWSQNRRSVSVLDGGAGS
HHHHHHCCCCHHHHHHHHCCCCCCEEEECCCHHHCCCCCEEEEECCCCCC
>Mature Secondary Structure 
STPARFRGLSLTLALCAALGLGACSKDSDLADASGFGAGGPGGAARPGSAQDFVVNIGD
CCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
RVFFESDSTDLTPTATATLDKQASWLQRYPRYSFLIEGHADERGTREYNYSLGARRAQTV
EEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCHHHHHH
QDYLASRGISASRMRTVSYGKERPVAVCNDISCWSQNRRSVSVLDGGAGS
HHHHHHCCCCHHHHHHHHCCCCCCEEEECCCHHHCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]