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The map label for this gene is ybgF [H]

Identifier: 218533184

GI number: 218533184

Start: 5689469

End: 5690494

Strand: Reverse

Name: ybgF [H]

Synonym: Mchl_5310

Alternate gene names: 218533184

Gene position: 5690494-5689469 (Counterclockwise)

Preceding gene: 218533185

Following gene: 218533183

Centisome position: 98.49

GC content: 70.96

Gene sequence:

>1026_bases
ATGTTCCGCCGCCTCCTCCTGACCCTCGGACTCGGTTTCGCGATCGCGCCAGCAGTGCTCTGCGGCGCGCGGGCGCAGGA
TGCGTCGGAACTCGTGGTGCGCCTCAACCGCCTCGAGAACGTGTCCCGGCAGCTCTCGGGACAGATCGAGACGCTCCAGT
ACGAAAACCGGCAGCTCAAGGAACAGCTTCGGAAGTTCCAGGAGGATGTCGAGTTCCGCTTCCAGGAAGGGAAGGGGAGC
GCCGCCGCACCGACCCGCAAGGCACCGGCGCCCGCCGCGGCACCGCCGTCGGCTGCCCCCTATGGCACCAATCCCGGTGA
GGGCCGGCCCGGCAAGCGCAGCGATGCCTTCGATCCCGAGCAGAACCCGAATGCGCCGGGCGCCCCGAAGCCACTCGGGA
CGACGCAGCCCTCGCTGCCCTTGCCGACCGGCGCGATCGCCGAAGCCGAGACACCCCTGCGCCGCTCCGTTCCCCCGACG
GTGGTAGAGGCGGAGGCCGACGCGTCCGAGGACGGCGATCTGCCGCCGCCCGGCTTCGGCGGTCCGGTGGATCTCTCGCC
GCCGCCCTCGCGCACCGGGTCGATTGCGCCGATCGATGCACCCGTCGGGAGCGCCAGCATCGCCGCGACCGGCAGCGGTG
ACGCGCAGGCCGATTTCGAGGCCGCTTACGCTCTCATTCGCGAGCGCCAGTACGAGCAGGCCGAGATGAGCCTGCGTCAG
TTCATCCAATCGCATCCGCGCGACCGGCTCGTGCCGAAGGCGACCTACTGGCTCGGTGAGAGCTACCTCCAGCGCAGCCG
CTCGCGCGAGGCCGCCGAGCAGTTCCTGAAGGTCTCGACCGACTACGCGAATTCGCCCGTCGCCCCCGAGGCGATGCTGA
AGCTCGGCACCTCTCTGCATGCGCTCGGCGCGAAGGCCCAGGCCTGCGCCACGCTGGCCGAGGTCGAGCGCAAGTTTCCG
AGCGCCGGCGCCACCGTGCGCCAGGGCGTCGAGCGCGAGCAGAAGCGCGCCCGCTGCGCCGCTTGA

Upstream 100 bases:

>100_bases
GTCGTCGACCGTCGCCGCTCCGGCCGCGACGGCGCAGCGGAGGGTTCGGGGAGGACACGACGTCGGCCGCGAACCAGAAG
ACCGATCGGTGCCAGCCGCC

Downstream 100 bases:

>100_bases
GCGCAGCGCCCGCGTCCCTCGACGAACGCCTCGCCCGCGCCCTCGCACCATTCCTCGAAGAACCCGCTCGCCCAGCCCTG
CTCGCCGTCTCGGGCGGACC

Product: tol-pal system protein YbgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MFRRLLLTLGLGFAIAPAVLCGARAQDASELVVRLNRLENVSRQLSGQIETLQYENRQLKEQLRKFQEDVEFRFQEGKGS
AAAPTRKAPAPAAAPPSAAPYGTNPGEGRPGKRSDAFDPEQNPNAPGAPKPLGTTQPSLPLPTGAIAEAETPLRRSVPPT
VVEAEADASEDGDLPPPGFGGPVDLSPPPSRTGSIAPIDAPVGSASIAATGSGDAQADFEAAYALIRERQYEQAEMSLRQ
FIQSHPRDRLVPKATYWLGESYLQRSRSREAAEQFLKVSTDYANSPVAPEAMLKLGTSLHALGAKAQACATLAEVERKFP
SAGATVRQGVEREQKRARCAA

Sequences:

>Translated_341_residues
MFRRLLLTLGLGFAIAPAVLCGARAQDASELVVRLNRLENVSRQLSGQIETLQYENRQLKEQLRKFQEDVEFRFQEGKGS
AAAPTRKAPAPAAAPPSAAPYGTNPGEGRPGKRSDAFDPEQNPNAPGAPKPLGTTQPSLPLPTGAIAEAETPLRRSVPPT
VVEAEADASEDGDLPPPGFGGPVDLSPPPSRTGSIAPIDAPVGSASIAATGSGDAQADFEAAYALIRERQYEQAEMSLRQ
FIQSHPRDRLVPKATYWLGESYLQRSRSREAAEQFLKVSTDYANSPVAPEAMLKLGTSLHALGAKAQACATLAEVERKFP
SAGATVRQGVEREQKRARCAA
>Mature_341_residues
MFRRLLLTLGLGFAIAPAVLCGARAQDASELVVRLNRLENVSRQLSGQIETLQYENRQLKEQLRKFQEDVEFRFQEGKGS
AAAPTRKAPAPAAAPPSAAPYGTNPGEGRPGKRSDAFDPEQNPNAPGAPKPLGTTQPSLPLPTGAIAEAETPLRRSVPPT
VVEAEADASEDGDLPPPGFGGPVDLSPPPSRTGSIAPIDAPVGSASIAATGSGDAQADFEAAYALIRERQYEQAEMSLRQ
FIQSHPRDRLVPKATYWLGESYLQRSRSREAAEQFLKVSTDYANSPVAPEAMLKLGTSLHALGAKAQACATLAEVERKFP
SAGATVRQGVEREQKRARCAA

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786963, Length=162, Percent_Identity=30.8641975308642, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014162
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36344; Mature: 36344

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRRLLLTLGLGFAIAPAVLCGARAQDASELVVRLNRLENVSRQLSGQIETLQYENRQLK
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
EQLRKFQEDVEFRFQEGKGSAAAPTRKAPAPAAAPPSAAPYGTNPGEGRPGKRSDAFDPE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QNPNAPGAPKPLGTTQPSLPLPTGAIAEAETPLRRSVPPTVVEAEADASEDGDLPPPGFG
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHCCCCCEEECCCCCCCCCCCCCCCCC
GPVDLSPPPSRTGSIAPIDAPVGSASIAATGSGDAQADFEAAYALIRERQYEQAEMSLRQ
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FIQSHPRDRLVPKATYWLGESYLQRSRSREAAEQFLKVSTDYANSPVAPEAMLKLGTSLH
HHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHH
ALGAKAQACATLAEVERKFPSAGATVRQGVEREQKRARCAA
HHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFRRLLLTLGLGFAIAPAVLCGARAQDASELVVRLNRLENVSRQLSGQIETLQYENRQLK
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
EQLRKFQEDVEFRFQEGKGSAAAPTRKAPAPAAAPPSAAPYGTNPGEGRPGKRSDAFDPE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QNPNAPGAPKPLGTTQPSLPLPTGAIAEAETPLRRSVPPTVVEAEADASEDGDLPPPGFG
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHCCCCCEEECCCCCCCCCCCCCCCCC
GPVDLSPPPSRTGSIAPIDAPVGSASIAATGSGDAQADFEAAYALIRERQYEQAEMSLRQ
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FIQSHPRDRLVPKATYWLGESYLQRSRSREAAEQFLKVSTDYANSPVAPEAMLKLGTSLH
HHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHH
ALGAKAQACATLAEVERKFPSAGATVRQGVEREQKRARCAA
HHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1574003; 8905232; 9278503; 7567469 [H]