| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is 218533079
Identifier: 218533079
GI number: 218533079
Start: 5569711
End: 5570763
Strand: Reverse
Name: 218533079
Synonym: Mchl_5205
Alternate gene names: NA
Gene position: 5570763-5569711 (Counterclockwise)
Preceding gene: 218533080
Following gene: 218533077
Centisome position: 96.41
GC content: 75.88
Gene sequence:
>1053_bases GTGACAGGTGAGACGGATTTCGTCCGGCGGATCGGGCTCGTGCATCCGATCATCCAGGCTCCCATGGTCGGCCCGAAGGC GGCGCTCGCCGCCGCCGTTAGCGGGGCGGGCGGGCTCGGCTCCCTTGCCTGCGCCGCGCTCACGCCCGATCAGATCCGCG CCGAGGTGACCGCGATCAGGGCCGTGACGGAGGCGCCGTTCAACCTGAACTTCTTCTGCCACGAGCCGCCCGCACCCGAT CCGGCACGCGAGGCCGCGTGGCGGGCCGCCCTCGCGCCCTACTACGCGGCGTTCGGGCTCGACCCGGCGGCGCCGGTGGC GATGGCGAACCGCGCGCCCTTCGACGCCGCGATGGCCGAGGTGGTGGAAGAGCTGCGCCCGGCCGTCGTCAGCTTCCATT TCGGCCTGCCGGCGGAGCCGCTGCTGCGGCGGGTGCGGGACGCCGGCTGCCTGATCTGGTCCTCGGCCACCACGGTGCGC GAGGCGCGCTGGCTCGCCGAACGCGGCGTCGATGCGGTGATCGCGCAAGGGGCGGAGGCCGGCGGCCACCGCGGTATGTT CCTCGCCGACGCGGCCGCCTCTCAGGTCGGCACCATCGCCCTCGTGCCGCAGATCGCCGACGCCGTGGATGTGCCGGTGA TCGCGGCCGGCGGCATCGGCGATCCCCGCGGCGTTGCGGCCGCCTTCGCGCTGGGCGCCAGCGCCGTGCAGGTCGGCACC GCCTATCTGCGCTGCCCGGAGGCCGGCATTTCCGCGCCCTATCGTGCGGCGCTGGCGGCGGCCCGCGACGAGGACACGGC GCTCACCAACGTGCTGACCGGGCGCCCGGCCCGCGGCCTGCTCACCCGCGCCGTGCGCGAGCTCGGACCCATCAGCCCGC TCGCTCCGGCCTTTCCCGGCGCGGCGGTGGCGCTCCAGCCCCTGCGCACGGCCGCGGAGGCGGCGGGCTCGGGCGATTTC TCGCCGCTCTGGTCCGGGCAGGCGGTCGGCCTCTCGCAGGAGCGGCCGGCGGCGGAACTGACCCGCCTGCTGGCGAGCCG CGTGCCGAGCTAA
Upstream 100 bases:
>100_bases GCTCCGCCTCGGCGACGATCCCTCCGCTGACCGGGATCTGGCCCCGCGCCCCGTCCGGCCTCGTCCCGCCACTCATATTG GGGCGAGTGAGGAGACAGCC
Downstream 100 bases:
>100_bases AGCGCATTCCGACGAAGTGGCCACCGGTTCGTTGAAAGAATGCGCGCCACAAGAATGACTTGGAGCCGCAACGAAAAAGG GCCGCCCCGAGGGGCGGCCC
Product: 2-nitropropane dioxygenase NPD
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MTGETDFVRRIGLVHPIIQAPMVGPKAALAAAVSGAGGLGSLACAALTPDQIRAEVTAIRAVTEAPFNLNFFCHEPPAPD PAREAAWRAALAPYYAAFGLDPAAPVAMANRAPFDAAMAEVVEELRPAVVSFHFGLPAEPLLRRVRDAGCLIWSSATTVR EARWLAERGVDAVIAQGAEAGGHRGMFLADAAASQVGTIALVPQIADAVDVPVIAAGGIGDPRGVAAAFALGASAVQVGT AYLRCPEAGISAPYRAALAAARDEDTALTNVLTGRPARGLLTRAVRELGPISPLAPAFPGAAVALQPLRTAAEAAGSGDF SPLWSGQAVGLSQERPAAELTRLLASRVPS
Sequences:
>Translated_350_residues MTGETDFVRRIGLVHPIIQAPMVGPKAALAAAVSGAGGLGSLACAALTPDQIRAEVTAIRAVTEAPFNLNFFCHEPPAPD PAREAAWRAALAPYYAAFGLDPAAPVAMANRAPFDAAMAEVVEELRPAVVSFHFGLPAEPLLRRVRDAGCLIWSSATTVR EARWLAERGVDAVIAQGAEAGGHRGMFLADAAASQVGTIALVPQIADAVDVPVIAAGGIGDPRGVAAAFALGASAVQVGT AYLRCPEAGISAPYRAALAAARDEDTALTNVLTGRPARGLLTRAVRELGPISPLAPAFPGAAVALQPLRTAAEAAGSGDF SPLWSGQAVGLSQERPAAELTRLLASRVPS >Mature_349_residues TGETDFVRRIGLVHPIIQAPMVGPKAALAAAVSGAGGLGSLACAALTPDQIRAEVTAIRAVTEAPFNLNFFCHEPPAPDP AREAAWRAALAPYYAAFGLDPAAPVAMANRAPFDAAMAEVVEELRPAVVSFHFGLPAEPLLRRVRDAGCLIWSSATTVRE ARWLAERGVDAVIAQGAEAGGHRGMFLADAAASQVGTIALVPQIADAVDVPVIAAGGIGDPRGVAAAFALGASAVQVGTA YLRCPEAGISAPYRAALAAARDEDTALTNVLTGRPARGLLTRAVRELGPISPLAPAFPGAAVALQPLRTAAEAAGSGDFS PLWSGQAVGLSQERPAAELTRLLASRVPS
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=318, Percent_Identity=32.3899371069182, Blast_Score=150, Evalue=4e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 35748; Mature: 35617
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGETDFVRRIGLVHPIIQAPMVGPKAALAAAVSGAGGLGSLACAALTPDQIRAEVTAIR CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHH AVTEAPFNLNFFCHEPPAPDPAREAAWRAALAPYYAAFGLDPAAPVAMANRAPFDAAMAE HHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHH VVEELRPAVVSFHFGLPAEPLLRRVRDAGCLIWSSATTVREARWLAERGVDAVIAQGAEA HHHHHHHHHEEEECCCCHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCHHHHHHCCCCC GGHRGMFLADAAASQVGTIALVPQIADAVDVPVIAAGGIGDPRGVAAAFALGASAVQVGT CCCCCEEEEHHHHHHCCEEEEHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH AYLRCPEAGISAPYRAALAAARDEDTALTNVLTGRPARGLLTRAVRELGPISPLAPAFPG HHEECCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC AAVALQPLRTAAEAAGSGDFSPLWSGQAVGLSQERPAAELTRLLASRVPS HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure TGETDFVRRIGLVHPIIQAPMVGPKAALAAAVSGAGGLGSLACAALTPDQIRAEVTAIR CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHH AVTEAPFNLNFFCHEPPAPDPAREAAWRAALAPYYAAFGLDPAAPVAMANRAPFDAAMAE HHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHH VVEELRPAVVSFHFGLPAEPLLRRVRDAGCLIWSSATTVREARWLAERGVDAVIAQGAEA HHHHHHHHHEEEECCCCHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCHHHHHHCCCCC GGHRGMFLADAAASQVGTIALVPQIADAVDVPVIAAGGIGDPRGVAAAFALGASAVQVGT CCCCCEEEEHHHHHHCCEEEEHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH AYLRCPEAGISAPYRAALAAARDEDTALTNVLTGRPARGLLTRAVRELGPISPLAPAFPG HHEECCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC AAVALQPLRTAAEAAGSGDFSPLWSGQAVGLSQERPAAELTRLLASRVPS HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA