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The map label for this gene is cyoD [H]

Identifier: 218532589

GI number: 218532589

Start: 4983929

End: 4984309

Strand: Reverse

Name: cyoD [H]

Synonym: Mchl_4703

Alternate gene names: 218532589

Gene position: 4984309-4983929 (Counterclockwise)

Preceding gene: 218532590

Following gene: 218532588

Centisome position: 86.26

GC content: 61.94

Gene sequence:

>381_bases
ATGAGCGGGGCAGCGCACGCCGACGATCACGGCCATGGGCAGGATGCTCACGGCCACGGCTCCTTCAAAGACTACGTCAC
GGGCTTCGTGCTCTCCGTCATCCTGACGGCGATCCCGTTCTGGCTGGTGATGGGCGACGTGCTGGGCGACAAGCTCATCA
CCGGCGTCGTCATCCTCGGTCTGGGCGCGGTGCAGATCGTGGTCCACATGATCTACTTCCTGCACATGAACACGAAGTCG
GAGGGCGGCTGGACCTTCATGGCGCTGATCTTCACGATCACCCTCGTGGTCATCACCCTGTGCGGGTCGATCTGGGTCAT
GCACCACCTCAACACCAACATGATGCCGATCTCGCCCGAGGAGATACGTCACGCTCCCTGA

Upstream 100 bases:

>100_bases
AGAACAAGCGCCGGTTGATGTGCCTGTCGATGTTCTGGCACTTCCTCGACGTCATCTGGATCGGCGTCTTCACCTTCGTG
TACCTGATGGGAGTCCTGCA

Downstream 100 bases:

>100_bases
CGCGTCCCGCAAACCCGACGCTCCGGCGCCCGCCGCCCCGGCAACGGGTCGGCGGCGCCCATGGCTCGTCCGGCTCGCGC
TGATCCTGGCGGGCCTTGTG

Product: cytochrome o ubiquinol oxidase subunit IV

Products: Ubiquinone-8; H2O [C]

Alternate protein names: Ubiquinol oxidase chain D [H]

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MSGAAHADDHGHGQDAHGHGSFKDYVTGFVLSVILTAIPFWLVMGDVLGDKLITGVVILGLGAVQIVVHMIYFLHMNTKS
EGGWTFMALIFTITLVVITLCGSIWVMHHLNTNMMPISPEEIRHAP

Sequences:

>Translated_126_residues
MSGAAHADDHGHGQDAHGHGSFKDYVTGFVLSVILTAIPFWLVMGDVLGDKLITGVVILGLGAVQIVVHMIYFLHMNTKS
EGGWTFMALIFTITLVVITLCGSIWVMHHLNTNMMPISPEEIRHAP
>Mature_125_residues
SGAAHADDHGHGQDAHGHGSFKDYVTGFVLSVILTAIPFWLVMGDVLGDKLITGVVILGLGAVQIVVHMIYFLHMNTKSE
GGWTFMALIFTITLVVITLCGSIWVMHHLNTNMMPISPEEIRHAP

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family [H]

Homologues:

Organism=Escherichia coli, GI1786632, Length=111, Percent_Identity=48.6486486486487, Blast_Score=108, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005171
- InterPro:   IPR014210 [H]

Pfam domain/function: PF03626 COX4_pro [H]

EC number: NA

Molecular weight: Translated: 13720; Mature: 13589

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGAAHADDHGHGQDAHGHGSFKDYVTGFVLSVILTAIPFWLVMGDVLGDKLITGVVILG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGAVQIVVHMIYFLHMNTKSEGGWTFMALIFTITLVVITLCGSIWVMHHLNTNMMPISPE
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
EIRHAP
HHCCCC
>Mature Secondary Structure 
SGAAHADDHGHGQDAHGHGSFKDYVTGFVLSVILTAIPFWLVMGDVLGDKLITGVVILG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGAVQIVVHMIYFLHMNTKSEGGWTFMALIFTITLVVITLCGSIWVMHHLNTNMMPISPE
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
EIRHAP
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ubiquinol-8; O(2) [C]

Specific reaction: Ubiquinol-8 + O(2) = Ubiquinone-8 + H2O [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]