| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is sgaA [H]
Identifier: 218532458
GI number: 218532458
Start: 4840166
End: 4841341
Strand: Reverse
Name: sgaA [H]
Synonym: Mchl_4570
Alternate gene names: 218532458
Gene position: 4841341-4840166 (Counterclockwise)
Preceding gene: 218532461
Following gene: 218532457
Centisome position: 83.79
GC content: 69.64
Gene sequence:
>1176_bases ATGACGCATCGCACCGGACGACACTTCCTGCACATTCCGGGCCCGAGCCCGGTGCCGGAGCGGGTGCTGCGCGCCATGGA CCGGCAGGTGATCGACCATCGCGGGCCGGACTTCGGCGTGCTCGGCCGCGAGGTGCTGGAGGGTTGCCGCACGATCTTCC GCACCAGGGGACCGGTGGTGATCTATCCCGGCTCCGGCACGGGGGCCTGGGAGGCGGCGATCGTCAACACGCTCTCGTCG GGCGACCGGGTGCTGATGTTCGAGACCGGCCACTTCGCCACCCTGTGGCGGCAGATGGCGGCGCGGTGGGGCATCGCGGT CGAGTTCGTGCCCGGCGATTGGCGCCACGGCGTCGATCCGGCCCTGGTCGAGGCGAAGCTCGCCGAGGATCGCAGCCATT CCTTCAAAGCCGTGATGGTGGTCCACAACGAGACCTCCACCGGCGTCACGAGCCGCATCCCCGCCATCCGCAAGGCGATC GACGCCGCCGGCCATCCGGCGCTGCTGCTGGTCGATACGATCTCCTCGCTCGGTTCGGTCGATGTCCGCCACGACGAGTG GGGCGTCGACGTCACCGTCAGCGGCTCGCAGAAGGGCCTGATGCTGCCGCCGGGCCTCAGCTTCACCGCGATCTCGGAGA AGGCCCGGGCCGCCGGAAAGTCCAACAACCTCCCCCGCTCCTACTGGGATTGGGAGGAGATGCTGAAGCCCAACGCCAAC GGCTACTTCCCCTACACGCCGGCCACCAACTTGCTCTACGGCCTGCGCGAGGCGGTGGCGATCCTGCTCGAAGAAGGGCT CGACAACGTCTTCGCCCGCCATCAGCGGCTGGCGGCCGCGACCCGGGCCGCGGTCGAAGCCTGGGGCCTCGAAGTGCTGT GCCTGAACCCGGACGAGCACTCGCCGGTGCTCACCGCGGTGATGATGCCGGACGGTAAGGGGGCGGACGCCTTCCGCGCG CTGGTGCTCGAGAAATTCGACATGTCGCTCGGCGCCGGGCTGTCGAAGCTCGCCGACAAGATCTTCCGCATCGGCCATCT CGGCGAGACCAACGACCTGACCCTGATGGGCGCCCTGTCCGGCGTCGAGATGGGCTTGGCGGCTGCCAGCGTGCCGCACC GGCCGGGTGGCGTGCTTGCCGCCATGGCGAGCCTGCGCTCCGGCCTCGACGGCTGA
Upstream 100 bases:
>100_bases ATGATACTTCTTGTCTCGGCCAAAAATGAATGCAAACCTACGGGATGAAACGACCGGGCCCGACGTGAAGTGCCCGGCAT CCGGCCCAACGGGAGGGACC
Downstream 100 bases:
>100_bases TCTTTTCCCGAACGCCCACGCCTCGGGCCAAGCCGCGCGTCAGATGCGGAGCCCGGGGCGATTGCTCATAAAAACTGGAG GAAGCCCCGATGATCACGAT
Product: serine--glyoxylate transaminase
Products: NA
Alternate protein names: SGAT [H]
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MTHRTGRHFLHIPGPSPVPERVLRAMDRQVIDHRGPDFGVLGREVLEGCRTIFRTRGPVVIYPGSGTGAWEAAIVNTLSS GDRVLMFETGHFATLWRQMAARWGIAVEFVPGDWRHGVDPALVEAKLAEDRSHSFKAVMVVHNETSTGVTSRIPAIRKAI DAAGHPALLLVDTISSLGSVDVRHDEWGVDVTVSGSQKGLMLPPGLSFTAISEKARAAGKSNNLPRSYWDWEEMLKPNAN GYFPYTPATNLLYGLREAVAILLEEGLDNVFARHQRLAAATRAAVEAWGLEVLCLNPDEHSPVLTAVMMPDGKGADAFRA LVLEKFDMSLGAGLSKLADKIFRIGHLGETNDLTLMGALSGVEMGLAAASVPHRPGGVLAAMASLRSGLDG
Sequences:
>Translated_391_residues MTHRTGRHFLHIPGPSPVPERVLRAMDRQVIDHRGPDFGVLGREVLEGCRTIFRTRGPVVIYPGSGTGAWEAAIVNTLSS GDRVLMFETGHFATLWRQMAARWGIAVEFVPGDWRHGVDPALVEAKLAEDRSHSFKAVMVVHNETSTGVTSRIPAIRKAI DAAGHPALLLVDTISSLGSVDVRHDEWGVDVTVSGSQKGLMLPPGLSFTAISEKARAAGKSNNLPRSYWDWEEMLKPNAN GYFPYTPATNLLYGLREAVAILLEEGLDNVFARHQRLAAATRAAVEAWGLEVLCLNPDEHSPVLTAVMMPDGKGADAFRA LVLEKFDMSLGAGLSKLADKIFRIGHLGETNDLTLMGALSGVEMGLAAASVPHRPGGVLAAMASLRSGLDG >Mature_390_residues THRTGRHFLHIPGPSPVPERVLRAMDRQVIDHRGPDFGVLGREVLEGCRTIFRTRGPVVIYPGSGTGAWEAAIVNTLSSG DRVLMFETGHFATLWRQMAARWGIAVEFVPGDWRHGVDPALVEAKLAEDRSHSFKAVMVVHNETSTGVTSRIPAIRKAID AAGHPALLLVDTISSLGSVDVRHDEWGVDVTVSGSQKGLMLPPGLSFTAISEKARAAGKSNNLPRSYWDWEEMLKPNANG YFPYTPATNLLYGLREAVAILLEEGLDNVFARHQRLAAATRAAVEAWGLEVLCLNPDEHSPVLTAVMMPDGKGADAFRAL VLEKFDMSLGAGLSKLADKIFRIGHLGETNDLTLMGALSGVEMGLAAASVPHRPGGVLAAMASLRSGLDG
Specific function: Unknown
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=346, Percent_Identity=31.5028901734104, Blast_Score=148, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17536281, Length=356, Percent_Identity=27.8089887640449, Blast_Score=122, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6321079, Length=361, Percent_Identity=29.3628808864266, Blast_Score=116, Evalue=6e-27, Organism=Drosophila melanogaster, GI17530823, Length=346, Percent_Identity=30.3468208092486, Blast_Score=150, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR020578 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.6.1.45 [H]
Molecular weight: Translated: 42101; Mature: 41970
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHRTGRHFLHIPGPSPVPERVLRAMDRQVIDHRGPDFGVLGREVLEGCRTIFRTRGPVV CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEE IYPGSGTGAWEAAIVNTLSSGDRVLMFETGHFATLWRQMAARWGIAVEFVPGDWRHGVDP EECCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCEEEEECCCCCCCCCCH ALVEAKLAEDRSHSFKAVMVVHNETSTGVTSRIPAIRKAIDAAGHPALLLVDTISSLGSV HHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCC DVRHDEWGVDVTVSGSQKGLMLPPGLSFTAISEKARAAGKSNNLPRSYWDWEEMLKPNAN EEECCCCCEEEEECCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCC GYFPYTPATNLLYGLREAVAILLEEGLDNVFARHQRLAAATRAAVEAWGLEVLCLNPDEH CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC SPVLTAVMMPDGKGADAFRALVLEKFDMSLGAGLSKLADKIFRIGHLGETNDLTLMGALS CCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECC GVEMGLAAASVPHRPGGVLAAMASLRSGLDG CHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure THRTGRHFLHIPGPSPVPERVLRAMDRQVIDHRGPDFGVLGREVLEGCRTIFRTRGPVV CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEE IYPGSGTGAWEAAIVNTLSSGDRVLMFETGHFATLWRQMAARWGIAVEFVPGDWRHGVDP EECCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCEEEEECCCCCCCCCCH ALVEAKLAEDRSHSFKAVMVVHNETSTGVTSRIPAIRKAIDAAGHPALLLVDTISSLGSV HHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCC DVRHDEWGVDVTVSGSQKGLMLPPGLSFTAISEKARAAGKSNNLPRSYWDWEEMLKPNAN EEECCCCCEEEEECCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCC GYFPYTPATNLLYGLREAVAILLEEGLDNVFARHQRLAAATRAAVEAWGLEVLCLNPDEH CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC SPVLTAVMMPDGKGADAFRALVLEKFDMSLGAGLSKLADKIFRIGHLGETNDLTLMGALS CCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECC GVEMGLAAASVPHRPGGVLAAMASLRSGLDG CHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8144463 [H]