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The map label for this gene is ydiU [C]

Identifier: 218532437

GI number: 218532437

Start: 4818429

End: 4819925

Strand: Reverse

Name: ydiU [C]

Synonym: Mchl_4549

Alternate gene names: 218532437

Gene position: 4819925-4818429 (Counterclockwise)

Preceding gene: 218532444

Following gene: 218532436

Centisome position: 83.42

GC content: 71.34

Gene sequence:

>1497_bases
TTGACGTTCCCCCGCGCCTGCCCGACTCCTCCCGCCACACCGGACGGAGCCGAACCCCTGCCCGCTTTCAAACCCTCGCG
CCGCCACGCCGATCTCGGGCCCGACTTCTACGACGTCGTGGCCCCGGCCGACTTCCCCTCGGCGGTCCTGCGCTACCGCA
ACCAAGCGTGGGCGCGGCGCGTCGGGCTCGACGATCTGTCGGACGAGGCGTGGATCGCGCATTTCGCGCGCTTCACGCCC
CTGCCCGGCTCGTTCGAGCGGCCGCTGGCGCTGCGCTACCACGGCCATCAGTTCCGCTCCTACAACGCGGATCTCGGCGA
CGGGCGCGGCTTCCTGTTCGCGCAAGTCCACGACCGTCGCGACGGGCGCCTGCTCGATCTCGGCACCAAGGGCAGCGGCA
CGACGCCCTGGTCGCGCGGGGCGGACGGGCGGCTCACCCTGAAGGGCGGCGTGCGCGAGGTGCTGGCCACCGCCATGCTG
GAGGCGCTCGGCGTCGAGACCTCGAAGTCGTTCAGCCTGATCGAGACCGGCGAGGCGCTGGAGCGAGGCGACGAGCCCTC
CCCCACCCGCTCGGCGGTGCTGGTGAGGCTGTCGCACTCGCACCTGCGCATCGGCACCTTCCAGCGCTTCCAGTTCCTCG
GACAGCCCGAGGCGATCGCCCGCCTCGTCGATTACGTGGTCGAAACCTACTATCCCGGCATCCAAGAAGCCGAGCCGGCG
GAGCGGGCCGCCCTGTTCTTCGAGGCGATGCTGGCGCGGGTGGCGCGGATGGGCGCGCAGTGGATGGCCGCGGGCTTCGT
CCACGGCGTGCTCAACACCGACAACATCAACGTCACCGGCGAGAGCTTCGATTACGGCCCCTGGCGCTTCGCTCCTGCCC
ATGATCCGGCCTTCACCGCCGCCTATTTCGACGAGTGGGGCCTCTACAGCTTCGGCCGCCAGCCCGAGGCCCTGTTCTGG
AACCTGAGCCGGCTGGCCGATTGCCTGCTCGGCCTCGTGCCGAAGGAGCGGCTGGAGGCGGGGTTGAAAGGCTTCGGCCC
GGCGCTTCAGGACGCGTTCGCCGAGGCGATCCTGTTCCGGCTCGGGGTCACGCCTGCGCAGGGGGAGGGCGAGGGCGCGG
TCCACCGGCTGGTCGGCGCATTCTGGGCCTTCCTCGAGACCAGCCGCGCGCCGTTCGAGCAGGTCTTCTTCGACTGGCGC
GGCGGGCTGGCGAGTGAGCCCCGCGCGGCCCGGAGCCCGGCGGGCGAGCACTACGCCAGCGACGCCTTCCGCCCGGTCCA
CACCGCGCTCCAGGCGATGCGTCCCGCCGCCAAGGCCAACCTCGACCACCCTTACTTTGCCCGCGAAAAGCCCTGCACGA
TGCTGATCGACGAGGTCGAGGCGCTCTGGGCGCCGATCGCCGAGGCCGACGACTGGTCGGCGCTCCAGGCCAAGCTCGCC
GAGATCGAGACCATGGCCGAGGCCTACGGCACGCAAGCCCTCCCCCCGGAGGCCTGA

Upstream 100 bases:

>100_bases
TGCCTTGTTCGTCATCGTTCCCGTTGGAAGAGATAGCCGCGAACCGGGGACGGCACCAGGGATCGCCCCTCCCCGCCGCC
GGGTTCAGCCTTTCGTCGGC

Downstream 100 bases:

>100_bases
GGCGGAGATGGCTCAGCGTTTCGTCCTGCGGGGCCGGACCGCCCTCGTCACGGGGGCCGCGAGCGGCATCGGCGCGGCGC
TGAGCCTCGCGCTGGCAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 498; Mature: 497

Protein sequence:

>498_residues
MTFPRACPTPPATPDGAEPLPAFKPSRRHADLGPDFYDVVAPADFPSAVLRYRNQAWARRVGLDDLSDEAWIAHFARFTP
LPGSFERPLALRYHGHQFRSYNADLGDGRGFLFAQVHDRRDGRLLDLGTKGSGTTPWSRGADGRLTLKGGVREVLATAML
EALGVETSKSFSLIETGEALERGDEPSPTRSAVLVRLSHSHLRIGTFQRFQFLGQPEAIARLVDYVVETYYPGIQEAEPA
ERAALFFEAMLARVARMGAQWMAAGFVHGVLNTDNINVTGESFDYGPWRFAPAHDPAFTAAYFDEWGLYSFGRQPEALFW
NLSRLADCLLGLVPKERLEAGLKGFGPALQDAFAEAILFRLGVTPAQGEGEGAVHRLVGAFWAFLETSRAPFEQVFFDWR
GGLASEPRAARSPAGEHYASDAFRPVHTALQAMRPAAKANLDHPYFAREKPCTMLIDEVEALWAPIAEADDWSALQAKLA
EIETMAEAYGTQALPPEA

Sequences:

>Translated_498_residues
MTFPRACPTPPATPDGAEPLPAFKPSRRHADLGPDFYDVVAPADFPSAVLRYRNQAWARRVGLDDLSDEAWIAHFARFTP
LPGSFERPLALRYHGHQFRSYNADLGDGRGFLFAQVHDRRDGRLLDLGTKGSGTTPWSRGADGRLTLKGGVREVLATAML
EALGVETSKSFSLIETGEALERGDEPSPTRSAVLVRLSHSHLRIGTFQRFQFLGQPEAIARLVDYVVETYYPGIQEAEPA
ERAALFFEAMLARVARMGAQWMAAGFVHGVLNTDNINVTGESFDYGPWRFAPAHDPAFTAAYFDEWGLYSFGRQPEALFW
NLSRLADCLLGLVPKERLEAGLKGFGPALQDAFAEAILFRLGVTPAQGEGEGAVHRLVGAFWAFLETSRAPFEQVFFDWR
GGLASEPRAARSPAGEHYASDAFRPVHTALQAMRPAAKANLDHPYFAREKPCTMLIDEVEALWAPIAEADDWSALQAKLA
EIETMAEAYGTQALPPEA
>Mature_497_residues
TFPRACPTPPATPDGAEPLPAFKPSRRHADLGPDFYDVVAPADFPSAVLRYRNQAWARRVGLDDLSDEAWIAHFARFTPL
PGSFERPLALRYHGHQFRSYNADLGDGRGFLFAQVHDRRDGRLLDLGTKGSGTTPWSRGADGRLTLKGGVREVLATAMLE
ALGVETSKSFSLIETGEALERGDEPSPTRSAVLVRLSHSHLRIGTFQRFQFLGQPEAIARLVDYVVETYYPGIQEAEPAE
RAALFFEAMLARVARMGAQWMAAGFVHGVLNTDNINVTGESFDYGPWRFAPAHDPAFTAAYFDEWGLYSFGRQPEALFWN
LSRLADCLLGLVPKERLEAGLKGFGPALQDAFAEAILFRLGVTPAQGEGEGAVHRLVGAFWAFLETSRAPFEQVFFDWRG
GLASEPRAARSPAGEHYASDAFRPVHTALQAMRPAAKANLDHPYFAREKPCTMLIDEVEALWAPIAEADDWSALQAKLAE
IETMAEAYGTQALPPEA

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=381, Percent_Identity=31.496062992126, Blast_Score=177, Evalue=2e-44,
Organism=Escherichia coli, GI1787999, Length=396, Percent_Identity=31.5656565656566, Blast_Score=190, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6325034, Length=320, Percent_Identity=30.3125, Blast_Score=145, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 54838; Mature: 54707

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFPRACPTPPATPDGAEPLPAFKPSRRHADLGPDFYDVVAPADFPSAVLRYRNQAWARR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHH
VGLDDLSDEAWIAHFARFTPLPGSFERPLALRYHGHQFRSYNADLGDGRGFLFAQVHDRR
CCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCEEEEEEEECCC
DGRLLDLGTKGSGTTPWSRGADGRLTLKGGVREVLATAMLEALGVETSKSFSLIETGEAL
CCEEEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHH
ERGDEPSPTRSAVLVRLSHSHLRIGTFQRFQFLGQPEAIARLVDYVVETYYPGIQEAEPA
HCCCCCCCCHHEEEEEECCCCEEECHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHH
ERAALFFEAMLARVARMGAQWMAAGFVHGVLNTDNINVTGESFDYGPWRFAPAHDPAFTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEECCCCCCCCHHH
AYFDEWGLYSFGRQPEALFWNLSRLADCLLGLVPKERLEAGLKGFGPALQDAFAEAILFR
HHHHCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
LGVTPAQGEGEGAVHRLVGAFWAFLETSRAPFEQVFFDWRGGLASEPRAARSPAGEHYAS
HCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHCCCCCCHHHH
DAFRPVHTALQAMRPAAKANLDHPYFAREKPCTMLIDEVEALWAPIAEADDWSALQAKLA
HCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
EIETMAEAYGTQALPPEA
HHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TFPRACPTPPATPDGAEPLPAFKPSRRHADLGPDFYDVVAPADFPSAVLRYRNQAWARR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHH
VGLDDLSDEAWIAHFARFTPLPGSFERPLALRYHGHQFRSYNADLGDGRGFLFAQVHDRR
CCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCEEEEEEEECCC
DGRLLDLGTKGSGTTPWSRGADGRLTLKGGVREVLATAMLEALGVETSKSFSLIETGEAL
CCEEEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHH
ERGDEPSPTRSAVLVRLSHSHLRIGTFQRFQFLGQPEAIARLVDYVVETYYPGIQEAEPA
HCCCCCCCCHHEEEEEECCCCEEECHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHH
ERAALFFEAMLARVARMGAQWMAAGFVHGVLNTDNINVTGESFDYGPWRFAPAHDPAFTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEECCCCCCCCHHH
AYFDEWGLYSFGRQPEALFWNLSRLADCLLGLVPKERLEAGLKGFGPALQDAFAEAILFR
HHHHCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
LGVTPAQGEGEGAVHRLVGAFWAFLETSRAPFEQVFFDWRGGLASEPRAARSPAGEHYAS
HCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHCCCCCCHHHH
DAFRPVHTALQAMRPAAKANLDHPYFAREKPCTMLIDEVEALWAPIAEADDWSALQAKLA
HCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
EIETMAEAYGTQALPPEA
HHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12240834 [H]