| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is fct [H]
Identifier: 218532377
GI number: 218532377
Start: 4748251
End: 4750608
Strand: Reverse
Name: fct [H]
Synonym: Mchl_4489
Alternate gene names: 218532377
Gene position: 4750608-4748251 (Counterclockwise)
Preceding gene: 218532378
Following gene: 218532376
Centisome position: 82.22
GC content: 69.38
Gene sequence:
>2358_bases ATGTTCGAAGATCGCGCCGTTTCTGCTCGGCCGGCTCCGCGTGCGGGCCAAATCGCGCGCCTGCTCGCCTCGACCTTCCT GTCGGGAACGGCCCTGCTCGGCCTCGCCGTACCGGGCCTCGCACAGGAAGCGGCCGGCGCCGTCGAGCTGTCCGAGTTGA GCGTGACCGGCGAGGGCCGCGGCGCCACGCTCGGCGGCGCGCTGTACGGCCCCGGCGGCGCCCAGGGCGCCGTGCCGGGC TACGTCGCCAGCCGCAGCACCGTCGCGACCAAGACCGACACGCCGATCCTGGAGACGGCCCAGTCGATCTCCGTCATCGG CCGCAAGCAGATCGAGGACCAGAACGCGCTCAGCATCAACCAGGCCCTGCGCTACACCCCGAGCGTCACCACCGAGCAGC GCGGCGGCGCCGGCTCGACCCGGCTGGAGCAGTTCCTGATCCGCGGCTTCAACGCGCCGGTCTTCCTCGACGGCATGGCG CTGATCGGCGGGCGCGACGCCAACGCCACGATCGAGCCCTACCGGCTGGAGCGCATCGACGTCATCAAGGGCCCGGCCTC GGTGCTCTACGGGCAGTCGGGCCCGGGCGGCATCGTCAACCTCGTGTCGAAGGTGCCGCAATTCGTCCGCCACGGCGAAG TCTTCGTCCAGGGCGGCGGCTTCAGCGAGGTGCGCGGCGGCGTCGATGTCGGCGGCCCGATCCAATCGGACGTGCCCTGG CTCGCCGACCAGTTCGCCTACCGCATCGTCGGCTTCGGCTGGAACGGCGACGGCCCCGTGGACACGACCCGGGTCGAGCG CGCGCTGATCAACCCGAGCCTGTCGTGGCGCCCTTCCGCCGACACCCAGCTCACGATCATCGGCAACTACCAGCGCGATC CGTTCTCGGGCTTCTACGGCGGCTTCCCGGCGGTGGGCACGGTCTTCCCGCGCAACTTCGGCAACGGCATCATCGGCCGC CTGCCAGTGAACTTCTACGACGGCGACCGCGGCATCGAGCGCTCGGACCGGACCCAGGCCTCGATCGAGTACCTGTTCGA TCACCGCTTCAGCGAGAACCTGCGCTTCCACTCGGCCGGGCGCTACCTGCGCACGCAGGGCGACTACCGCAGCGTCTACA GCGCCTTCAATCCCCGCAACGGCCCCTTCGCCAGCGGCCCGCTGATCCCGCGCGCGGTCATCGGCACCAACGTGGCGGCG GAAGCCTACACGATGGACAGCAACTTCGTCGCCAACTTCGACACCGGCTTCATCGCCCACACCGCGCTGCTCGGCGTCGA TCACCGCACCTTCAGCACCCGGACGAGCGGCTCCCCGTTCCCGGACGCGCCGGACCTGAACGTGCTGGCGCCGAACTACA ACATGAATATTGCGGTCCCGGCCTTCAACACGGTCTCGCGGGTCGATGCGCAGCAGACCGGCGTGTACTTCCAGGATCAA GCGAAGTTCGACCGTCTCGTGCTGACACTGGGCGGGCGCTACGACGTCGCGCGCCAGACCGGTCCGACCCGCTCCTTCGC CGCCGGCAGACCGAGCACCCTGACGCTCCAGAACGCACCGGCCGACGCCTTCACCGGCCGGGCGAGCCTGCTCTACCTGT TCGATTCGGGCGTGGCGCCGTACGTGTCCTACAGCCAGGCCTTCGAGCCGATCGTCGCGGGCCGCGTGTTCGACCCGGCC TTCGGCACCGTCGGGCGCGTGCCCGATCCGCAATCGAGCGACCAGTACGAGGCCGGCATCAAGTACCAGCCGCCCGGCAC CGACATCCTGCTCACCGCGGCCTTCTTCGATATCCGCCAGTCGAACCGCACGACCGCGGACCCGGTGAACGGCAGCGCCT TCGTCGTCCAGACCGGACAGGTCGGGGTGCAGGGCATGGAGTTCGAGGCGCGGGTGAACCTGACCGAGGGCGTCACCCTG GTCGGCGGCTTCTCGCTCCTCGACATCCGCAACGTCCGCGACGACGGCCGAACCGCCAACGACCTGACCCCCGGTCAGAC GGTGCCGCTCCAGGGCCGCAGCCCGGTTCTGGTGCCGGATTCCACCGCCTCGCTGCTGGCGACCTACCGCTTCAGCGAGG GGCCGCTCCTCGGCCTCGAAGTCGGCGGCGGCGTGCGCTACCTCGGGCCGTCCTGGGGTGATGCGGCCAACACCTTCAAG GTGCCGGCCAGCGTGCTCGTCGACGCCACGCTCAACTATGACTTGAAGTACCTCGACGCGACGCTCCAGGGCTTCTCGAT GCAGCTGAACGCCAACAACCTCCTCGACGAGCGCTACGTCAGCGGCTGCAACGGCTACACCAGTTGCTATTACGGCCTGC CGCAGACCGTCTATGCAACCCTGCGCTATCGCTGGTAG
Upstream 100 bases:
>100_bases ATAGATCTTGCATGTCTCATTCGGTGTTTGTCATACGCAGGCACAACTCGTTGTGTCCTCTTAGGTTTTTATAACCTAAG TTAAAAGCGTACCGGAAAAG
Downstream 100 bases:
>100_bases GAGGCCGGCATGGCTTCGCAAGGCAGTGCGCAAGGCAGGACGACGGCGCTCGAGCGGGCCTCCGTGGCCGGCCGGGTCGT GCTGGCGGCGGGCGGCGGCT
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 785; Mature: 785
Protein sequence:
>785_residues MFEDRAVSARPAPRAGQIARLLASTFLSGTALLGLAVPGLAQEAAGAVELSELSVTGEGRGATLGGALYGPGGAQGAVPG YVASRSTVATKTDTPILETAQSISVIGRKQIEDQNALSINQALRYTPSVTTEQRGGAGSTRLEQFLIRGFNAPVFLDGMA LIGGRDANATIEPYRLERIDVIKGPASVLYGQSGPGGIVNLVSKVPQFVRHGEVFVQGGGFSEVRGGVDVGGPIQSDVPW LADQFAYRIVGFGWNGDGPVDTTRVERALINPSLSWRPSADTQLTIIGNYQRDPFSGFYGGFPAVGTVFPRNFGNGIIGR LPVNFYDGDRGIERSDRTQASIEYLFDHRFSENLRFHSAGRYLRTQGDYRSVYSAFNPRNGPFASGPLIPRAVIGTNVAA EAYTMDSNFVANFDTGFIAHTALLGVDHRTFSTRTSGSPFPDAPDLNVLAPNYNMNIAVPAFNTVSRVDAQQTGVYFQDQ AKFDRLVLTLGGRYDVARQTGPTRSFAAGRPSTLTLQNAPADAFTGRASLLYLFDSGVAPYVSYSQAFEPIVAGRVFDPA FGTVGRVPDPQSSDQYEAGIKYQPPGTDILLTAAFFDIRQSNRTTADPVNGSAFVVQTGQVGVQGMEFEARVNLTEGVTL VGGFSLLDIRNVRDDGRTANDLTPGQTVPLQGRSPVLVPDSTASLLATYRFSEGPLLGLEVGGGVRYLGPSWGDAANTFK VPASVLVDATLNYDLKYLDATLQGFSMQLNANNLLDERYVSGCNGYTSCYYGLPQTVYATLRYRW
Sequences:
>Translated_785_residues MFEDRAVSARPAPRAGQIARLLASTFLSGTALLGLAVPGLAQEAAGAVELSELSVTGEGRGATLGGALYGPGGAQGAVPG YVASRSTVATKTDTPILETAQSISVIGRKQIEDQNALSINQALRYTPSVTTEQRGGAGSTRLEQFLIRGFNAPVFLDGMA LIGGRDANATIEPYRLERIDVIKGPASVLYGQSGPGGIVNLVSKVPQFVRHGEVFVQGGGFSEVRGGVDVGGPIQSDVPW LADQFAYRIVGFGWNGDGPVDTTRVERALINPSLSWRPSADTQLTIIGNYQRDPFSGFYGGFPAVGTVFPRNFGNGIIGR LPVNFYDGDRGIERSDRTQASIEYLFDHRFSENLRFHSAGRYLRTQGDYRSVYSAFNPRNGPFASGPLIPRAVIGTNVAA EAYTMDSNFVANFDTGFIAHTALLGVDHRTFSTRTSGSPFPDAPDLNVLAPNYNMNIAVPAFNTVSRVDAQQTGVYFQDQ AKFDRLVLTLGGRYDVARQTGPTRSFAAGRPSTLTLQNAPADAFTGRASLLYLFDSGVAPYVSYSQAFEPIVAGRVFDPA FGTVGRVPDPQSSDQYEAGIKYQPPGTDILLTAAFFDIRQSNRTTADPVNGSAFVVQTGQVGVQGMEFEARVNLTEGVTL VGGFSLLDIRNVRDDGRTANDLTPGQTVPLQGRSPVLVPDSTASLLATYRFSEGPLLGLEVGGGVRYLGPSWGDAANTFK VPASVLVDATLNYDLKYLDATLQGFSMQLNANNLLDERYVSGCNGYTSCYYGLPQTVYATLRYRW >Mature_785_residues MFEDRAVSARPAPRAGQIARLLASTFLSGTALLGLAVPGLAQEAAGAVELSELSVTGEGRGATLGGALYGPGGAQGAVPG YVASRSTVATKTDTPILETAQSISVIGRKQIEDQNALSINQALRYTPSVTTEQRGGAGSTRLEQFLIRGFNAPVFLDGMA LIGGRDANATIEPYRLERIDVIKGPASVLYGQSGPGGIVNLVSKVPQFVRHGEVFVQGGGFSEVRGGVDVGGPIQSDVPW LADQFAYRIVGFGWNGDGPVDTTRVERALINPSLSWRPSADTQLTIIGNYQRDPFSGFYGGFPAVGTVFPRNFGNGIIGR LPVNFYDGDRGIERSDRTQASIEYLFDHRFSENLRFHSAGRYLRTQGDYRSVYSAFNPRNGPFASGPLIPRAVIGTNVAA EAYTMDSNFVANFDTGFIAHTALLGVDHRTFSTRTSGSPFPDAPDLNVLAPNYNMNIAVPAFNTVSRVDAQQTGVYFQDQ AKFDRLVLTLGGRYDVARQTGPTRSFAAGRPSTLTLQNAPADAFTGRASLLYLFDSGVAPYVSYSQAFEPIVAGRVFDPA FGTVGRVPDPQSSDQYEAGIKYQPPGTDILLTAAFFDIRQSNRTTADPVNGSAFVVQTGQVGVQGMEFEARVNLTEGVTL VGGFSLLDIRNVRDDGRTANDLTPGQTVPLQGRSPVLVPDSTASLLATYRFSEGPLLGLEVGGGVRYLGPSWGDAANTFK VPASVLVDATLNYDLKYLDATLQGFSMQLNANNLLDERYVSGCNGYTSCYYGLPQTVYATLRYRW
Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=805, Percent_Identity=33.0434782608696, Blast_Score=372, Evalue=1e-104, Organism=Escherichia coli, GI1787024, Length=754, Percent_Identity=23.7400530503979, Blast_Score=107, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 84056; Mature: 84056
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEDRAVSARPAPRAGQIARLLASTFLSGTALLGLAVPGLAQEAAGAVELSELSVTGEGR CCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHEEHHCCCHHHHHCCCEEEEEEEEECCCC GATLGGALYGPGGAQGAVPGYVASRSTVATKTDTPILETAQSISVIGRKQIEDQNALSIN CCEECCEEECCCCCCCCCCCEECCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEHH QALRYTPSVTTEQRGGAGSTRLEQFLIRGFNAPVFLDGMALIGGRDANATIEPYRLERID HHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCEEEECCCCCCCCCCCEEEEEEE VIKGPASVLYGQSGPGGIVNLVSKVPQFVRHGEVFVQGGGFSEVRGGVDVGGPIQSDVPW EECCCHHHEECCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCCCCCCCCH LADQFAYRIVGFGWNGDGPVDTTRVERALINPSLSWRPSADTQLTIIGNYQRDPFSGFYG HHHHHEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC GFPAVGTVFPRNFGNGIIGRLPVNFYDGDRGIERSDRTQASIEYLFDHRFSENLRFHSAG CCCCHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCC RYLRTQGDYRSVYSAFNPRNGPFASGPLIPRAVIGTNVAAEAYTMDSNFVANFDTGFIAH CEEECCCHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCEEEEEEECCCEEEECCCCHHHH TALLGVDHRTFSTRTSGSPFPDAPDLNVLAPNYNMNIAVPAFNTVSRVDAQQTGVYFQDQ HHHHCCCCCEECCCCCCCCCCCCCCCEEECCCCCCEEEECCCCHHHHHCHHHCCCEEECC AKFDRLVLTLGGRYDVARQTGPTRSFAAGRPSTLTLQNAPADAFTGRASLLYLFDSGVAP CCCEEEEEEECCCEEEHHCCCCCCCCCCCCCCEEEEECCCCCHHCCCEEEEEEEECCCCC YVSYSQAFEPIVAGRVFDPAFGTVGRVPDPQSSDQYEAGIKYQPPGTDILLTAAFFDIRQ HHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEHHHHHH SNRTTADPVNGSAFVVQTGQVGVQGMEFEARVNLTEGVTLVGGFSLLDIRNVRDDGRTAN CCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCEEEEECEEEEEEECCCCCCCCCC DLTPGQTVPLQGRSPVLVPDSTASLLATYRFSEGPLLGLEVGGGVRYLGPSWGDAANTFK CCCCCCEECCCCCCCEEECCCHHHEEEEEEECCCCEEEEEECCCEEECCCCCCCCCCEEE VPASVLVDATLNYDLKYLDATLQGFSMQLNANNLLDERYVSGCNGYTSCYYGLPQTVYAT CCCEEEEEEECCCCHHEEHHHHCCEEEEECCCHHHHHHHHCCCCCCCCEECCCCHHEEEE LRYRW EEECC >Mature Secondary Structure MFEDRAVSARPAPRAGQIARLLASTFLSGTALLGLAVPGLAQEAAGAVELSELSVTGEGR CCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHEEHHCCCHHHHHCCCEEEEEEEEECCCC GATLGGALYGPGGAQGAVPGYVASRSTVATKTDTPILETAQSISVIGRKQIEDQNALSIN CCEECCEEECCCCCCCCCCCEECCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEHH QALRYTPSVTTEQRGGAGSTRLEQFLIRGFNAPVFLDGMALIGGRDANATIEPYRLERID HHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCEEEECCCCCCCCCCCEEEEEEE VIKGPASVLYGQSGPGGIVNLVSKVPQFVRHGEVFVQGGGFSEVRGGVDVGGPIQSDVPW EECCCHHHEECCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCCCCCCCCH LADQFAYRIVGFGWNGDGPVDTTRVERALINPSLSWRPSADTQLTIIGNYQRDPFSGFYG HHHHHEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC GFPAVGTVFPRNFGNGIIGRLPVNFYDGDRGIERSDRTQASIEYLFDHRFSENLRFHSAG CCCCHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCC RYLRTQGDYRSVYSAFNPRNGPFASGPLIPRAVIGTNVAAEAYTMDSNFVANFDTGFIAH CEEECCCHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCEEEEEEECCCEEEECCCCHHHH TALLGVDHRTFSTRTSGSPFPDAPDLNVLAPNYNMNIAVPAFNTVSRVDAQQTGVYFQDQ HHHHCCCCCEECCCCCCCCCCCCCCCEEECCCCCCEEEECCCCHHHHHCHHHCCCEEECC AKFDRLVLTLGGRYDVARQTGPTRSFAAGRPSTLTLQNAPADAFTGRASLLYLFDSGVAP CCCEEEEEEECCCEEEHHCCCCCCCCCCCCCCEEEEECCCCCHHCCCEEEEEEEECCCCC YVSYSQAFEPIVAGRVFDPAFGTVGRVPDPQSSDQYEAGIKYQPPGTDILLTAAFFDIRQ HHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEHHHHHH SNRTTADPVNGSAFVVQTGQVGVQGMEFEARVNLTEGVTLVGGFSLLDIRNVRDDGRTAN CCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCEEEEECEEEEEEECCCCCCCCCC DLTPGQTVPLQGRSPVLVPDSTASLLATYRFSEGPLLGLEVGGGVRYLGPSWGDAANTFK CCCCCCEECCCCCCCEEECCCHHHEEEEEEECCCCEEEEEECCCEEECCCCCCCCCCEEE VPASVLVDATLNYDLKYLDATLQGFSMQLNANNLLDERYVSGCNGYTSCYYGLPQTVYAT CCCEEEEEEECCCCHHEEHHHHCCEEEEECCCHHHHHHHHCCCCCCCCEECCCCHHEEEE LRYRW EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8576065 [H]