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The map label for this gene is 218532366

Identifier: 218532366

GI number: 218532366

Start: 4739962

End: 4741689

Strand: Reverse

Name: 218532366

Synonym: Mchl_4478

Alternate gene names: NA

Gene position: 4741689-4739962 (Counterclockwise)

Preceding gene: 218532367

Following gene: 218532365

Centisome position: 82.07

GC content: 69.39

Gene sequence:

>1728_bases
TTGGCGTCTGAATCCGCGAGCCCGCCCGAAGGCACTTCCAAGGACGCTTCGAAGAGCGCTCCCGCGCTCGCGAAGGTCGC
CACCGGCATCGACGGCTTCGATACCATCACCTTCGGCGGCCTGCCGAAGGGGCGGCCCTCGCTAGTCTGCGGCGCGGCCG
GCTGCGGCAAGACGTTGTTCGCCACCACCTTTCTCGTCAACGGTGCGACCCGCTTCGGCGAGCCCGGCGTGTTCATGAGC
TTCGAGGAGCGCGCCGAGGATCTCGTCGCCAACGTCGCCTCCCTCGGCTACGACCTCGACGGGCTGGTGGCGCAGGGCAA
GCTCGCCATCGACCACGTCCGCGTGGAGCGCAGCGAGATCGAGGAGACCGGCGAGTACGACCTCGAAGGGCTGTTCATCC
GCCTCGGCTTCGCGGTGGATTCGATCGGCGCCAAGCGCATCGTGCTCGACACGATCGAGACCCTGTTCGCGGGCTTTTCC
GACGAAACGGTGCTGCGGGCCGAACTCCGCCGCCTGTTCGGCTGGATCAAGGACCGGGGCCTGACCGCGATCATCACCGG
CGAGCGCGGCGACGGCCAGCTCACCCGCCAGGGGATGGAGGAATACGTCTCCGACTGCGTGGTGCTGCTCGACAACCGCG
TCGAGGACCAGATCACGACGCGGCGCCTGCGCGTGGTGAAGTATCGCGGCTCGGCCCACGGCACCAACGAGTACCCGTTC
CTGATCGATGCCGAGGGCATCAGCGTCCTGCCGGTCACGGCGGCCGACCTCGACTACACCATCGCCGAGGGCGTGGCCTC
CACCGGCATCCCCGGCCTCGACGCGATGCTCGAACCCGGCGGCTTCCACCGCGGCACCAGCATCCTCGTGTCGGGCGAGT
CCGGCACCGGCAAGACCATGATCACGTCGAGCATGATCGCCGCGGCCTGCGCGCGCGGCGAGCGCTGCATGTCCTTCGTG
TTCGAGGAGAGCGGCGACCAGATCATCCGCAACGCCCGCTCGATCGGCCTCGACCTCGCCCGCCATGTCGAGGCGGGCCT
GCTGCGCTTCGAGGCGGCGCGTCCGAGCCTCTACGGCCTGGAGATGCATCTGGCGCGCATGCACCGGGACATCGACCGCT
TCGCGCCCACCGTGGTGGTGGTCGATCCGCTCTCGGCCCTGCGCGGCCCGCCGGCCGAGCTTCAGGCGACGATGCTGCGC
ATGGTCGACATGCTGAAGAGCCGCGGCATCACCGCGGTGTTCACGAGCCTGCGCGAGGATGGCAGCCTCGACCACGACAG
CAATATCGGCGTCTCCTCGCTGATGGATGCCTGGATCAAGCTCCTCAACATCGAGGCCAACGGCGAGCGCTCGCGCACGC
TCTACGTCATCAAGGCCCGCGGCATGCGCCACTCGAACCAAGTGCGCGAGTTCAGCATGTCGGGCGACGGCATCGCCCTC
GTCGAGGCCTATATCGGCCCGGCGGGCGTGCTGACGGGCACCGCCCGCGTCGTGCAGGAGGCGGAGGAAGCCGCCGCCGT
TCTGCGCCGCGAGCAGGAGAGCCGCCGACGGCGGCGCGAGGCGGAGCGGCGGCGCCAGTCGCTGGAGCGCCAGATCGACG
AACTGCGCGCCACCCTGGAAGCCGCGGCAGAGGAAGAGGCGGTGCTGTTGAGCGAGGATGAGATGCGCGAGGCGATGCTG
ACGAGCGAGCGGCGCATCCTCTCCACCCGCCGGGGAGGCACGCGATGA

Upstream 100 bases:

>100_bases
CGGCCGCAGCGCTCCCCCATGACGATCCTGTGCCTGGACAGCGGACCGGACGGGTTGCCCCCGATGACGGCCGGGGAAGA
AATCGTCCTGGAGACCTGCC

Downstream 100 bases:

>100_bases
GCGGCTCCGAACCAACCGAGGACGGGCTCGACGCCGAAGCCGCCGGCCAAGTGAACGAGGGTACGGTGGACGAGGGCCAT
TACCACCTGCGCCTCTACGT

Product: circadian clock protein KaiC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 575; Mature: 574

Protein sequence:

>575_residues
MASESASPPEGTSKDASKSAPALAKVATGIDGFDTITFGGLPKGRPSLVCGAAGCGKTLFATTFLVNGATRFGEPGVFMS
FEERAEDLVANVASLGYDLDGLVAQGKLAIDHVRVERSEIEETGEYDLEGLFIRLGFAVDSIGAKRIVLDTIETLFAGFS
DETVLRAELRRLFGWIKDRGLTAIITGERGDGQLTRQGMEEYVSDCVVLLDNRVEDQITTRRLRVVKYRGSAHGTNEYPF
LIDAEGISVLPVTAADLDYTIAEGVASTGIPGLDAMLEPGGFHRGTSILVSGESGTGKTMITSSMIAAACARGERCMSFV
FEESGDQIIRNARSIGLDLARHVEAGLLRFEAARPSLYGLEMHLARMHRDIDRFAPTVVVVDPLSALRGPPAELQATMLR
MVDMLKSRGITAVFTSLREDGSLDHDSNIGVSSLMDAWIKLLNIEANGERSRTLYVIKARGMRHSNQVREFSMSGDGIAL
VEAYIGPAGVLTGTARVVQEAEEAAAVLRREQESRRRRREAERRRQSLERQIDELRATLEAAAEEEAVLLSEDEMREAML
TSERRILSTRRGGTR

Sequences:

>Translated_575_residues
MASESASPPEGTSKDASKSAPALAKVATGIDGFDTITFGGLPKGRPSLVCGAAGCGKTLFATTFLVNGATRFGEPGVFMS
FEERAEDLVANVASLGYDLDGLVAQGKLAIDHVRVERSEIEETGEYDLEGLFIRLGFAVDSIGAKRIVLDTIETLFAGFS
DETVLRAELRRLFGWIKDRGLTAIITGERGDGQLTRQGMEEYVSDCVVLLDNRVEDQITTRRLRVVKYRGSAHGTNEYPF
LIDAEGISVLPVTAADLDYTIAEGVASTGIPGLDAMLEPGGFHRGTSILVSGESGTGKTMITSSMIAAACARGERCMSFV
FEESGDQIIRNARSIGLDLARHVEAGLLRFEAARPSLYGLEMHLARMHRDIDRFAPTVVVVDPLSALRGPPAELQATMLR
MVDMLKSRGITAVFTSLREDGSLDHDSNIGVSSLMDAWIKLLNIEANGERSRTLYVIKARGMRHSNQVREFSMSGDGIAL
VEAYIGPAGVLTGTARVVQEAEEAAAVLRREQESRRRRREAERRRQSLERQIDELRATLEAAAEEEAVLLSEDEMREAML
TSERRILSTRRGGTR
>Mature_574_residues
ASESASPPEGTSKDASKSAPALAKVATGIDGFDTITFGGLPKGRPSLVCGAAGCGKTLFATTFLVNGATRFGEPGVFMSF
EERAEDLVANVASLGYDLDGLVAQGKLAIDHVRVERSEIEETGEYDLEGLFIRLGFAVDSIGAKRIVLDTIETLFAGFSD
ETVLRAELRRLFGWIKDRGLTAIITGERGDGQLTRQGMEEYVSDCVVLLDNRVEDQITTRRLRVVKYRGSAHGTNEYPFL
IDAEGISVLPVTAADLDYTIAEGVASTGIPGLDAMLEPGGFHRGTSILVSGESGTGKTMITSSMIAAACARGERCMSFVF
EESGDQIIRNARSIGLDLARHVEAGLLRFEAARPSLYGLEMHLARMHRDIDRFAPTVVVVDPLSALRGPPAELQATMLRM
VDMLKSRGITAVFTSLREDGSLDHDSNIGVSSLMDAWIKLLNIEANGERSRTLYVIKARGMRHSNQVREFSMSGDGIALV
EAYIGPAGVLTGTARVVQEAEEAAAVLRREQESRRRRREAERRRQSLERQIDELRATLEAAAEEEAVLLSEDEMREAMLT
SERRILSTRRGGTR

Specific function: Unknown

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 kaiC domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014774
- InterPro:   IPR010624 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: NA

Molecular weight: Translated: 62525; Mature: 62394

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS51146 KAIC ; PS00675 SIGMA54_INTERACT_1 ; PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASESASPPEGTSKDASKSAPALAKVATGIDGFDTITFGGLPKGRPSLVCGAAGCGKTLF
CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCEEEECCCCCHHHH
ATTFLVNGATRFGEPGVFMSFEERAEDLVANVASLGYDLDGLVAQGKLAIDHVRVERSEI
HHHHHHCCCHHCCCCCCEECHHHHHHHHHHHHHHHCCCCCHHHHCCCEEHHHHHHHHHHH
EETGEYDLEGLFIRLGFAVDSIGAKRIVLDTIETLFAGFSDETVLRAELRRLFGWIKDRG
HHCCCCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
LTAIITGERGDGQLTRQGMEEYVSDCVVLLDNRVEDQITTRRLRVVKYRGSAHGTNEYPF
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEECCCCCCCCCCE
LIDAEGISVLPVTAADLDYTIAEGVASTGIPGLDAMLEPGGFHRGTSILVSGESGTGKTM
EEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEECCCCCCCHH
ITSSMIAAACARGERCMSFVFEESGDQIIRNARSIGLDLARHVEAGLLRFEAARPSLYGL
HHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
EMHLARMHRDIDRFAPTVVVVDPLSALRGPPAELQATMLRMVDMLKSRGITAVFTSLRED
HHHHHHHHHHHHHHCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
GSLDHDSNIGVSSLMDAWIKLLNIEANGERSRTLYVIKARGMRHSNQVREFSMSGDGIAL
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHCCCCCCEEE
VEAYIGPAGVLTGTARVVQEAEEAAAVLRREQESRRRRREAERRRQSLERQIDELRATLE
EEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAEEEAVLLSEDEMREAMLTSERRILSTRRGGTR
HHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ASESASPPEGTSKDASKSAPALAKVATGIDGFDTITFGGLPKGRPSLVCGAAGCGKTLF
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCEEEECCCCCHHHH
ATTFLVNGATRFGEPGVFMSFEERAEDLVANVASLGYDLDGLVAQGKLAIDHVRVERSEI
HHHHHHCCCHHCCCCCCEECHHHHHHHHHHHHHHHCCCCCHHHHCCCEEHHHHHHHHHHH
EETGEYDLEGLFIRLGFAVDSIGAKRIVLDTIETLFAGFSDETVLRAELRRLFGWIKDRG
HHCCCCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
LTAIITGERGDGQLTRQGMEEYVSDCVVLLDNRVEDQITTRRLRVVKYRGSAHGTNEYPF
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEECCCCCCCCCCE
LIDAEGISVLPVTAADLDYTIAEGVASTGIPGLDAMLEPGGFHRGTSILVSGESGTGKTM
EEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEECCCCCCCHH
ITSSMIAAACARGERCMSFVFEESGDQIIRNARSIGLDLARHVEAGLLRFEAARPSLYGL
HHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
EMHLARMHRDIDRFAPTVVVVDPLSALRGPPAELQATMLRMVDMLKSRGITAVFTSLRED
HHHHHHHHHHHHHHCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
GSLDHDSNIGVSSLMDAWIKLLNIEANGERSRTLYVIKARGMRHSNQVREFSMSGDGIAL
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHCCCCCCEEE
VEAYIGPAGVLTGTARVVQEAEEAAAVLRREQESRRRRREAERRRQSLERQIDELRATLE
EEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAEEEAVLLSEDEMREAMLTSERRILSTRRGGTR
HHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]