| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
Click here to switch to the map view.
The map label for this gene is yidB [C]
Identifier: 218532311
GI number: 218532311
Start: 4681205
End: 4681882
Strand: Reverse
Name: yidB [C]
Synonym: Mchl_4423
Alternate gene names: 218532311
Gene position: 4681882-4681205 (Counterclockwise)
Preceding gene: 218532312
Following gene: 218532310
Centisome position: 81.03
GC content: 73.45
Gene sequence:
>678_bases ATGGGGCTGCTCGATCAGGTCATCGGCGGAGTCGTCGGACAGGTTTTGGGGGGTGGACGCGGCGGGGCGCTGGCCTCGCC GGTGGTGAAAGCGCTCCTCATGCTGCTGCTCGCCAAGGGCGGCGGCGGCCTCGGCGACATCCTCGGCCGCGGATCACCGG AATCCGGCGGCCGATCTTTCCCCGGCCCGGGCGAAGACGACGGCGATCTCGGCGGGTTCAACCAGGGCCGCCGCAGCGGG CCGCCGTCTCAGGCAAGTGAGGCCGGCAACGACCTCGGCGGCGATTTCGGCGACCTTGCCGGCATGCTCGACGGTCCCGG CGTGGGTGCCTCCGGCAGCCGTTCGCCCGGCGGAGGCCCCTATGCCGGGCTCGACCGTGAGCCGGATGACGGAAGCGGCG CGGCCTCCCACGGGCTCGACGGCTTGATTCAGAGCTTCGAGCGGAGCGGTCTCGGCGACGTGATCGGCTCGTGGATCGGC CACGGCCCCAACCGCGAGATCGCGCCGAACCGTCTCGCCGACGCTCTGGGCCCGGGCACCCTCGACAGCTTGAGCCGCGA GACCGGCCTGCCGCGCGAGGATCTGCTCGCGCAACTGGCGCAGGCCCTGCCCGGCGTGATCGACGCGCTGACGCCCCAGG GCCGGGCGCCAAGCCGCGAGGAGCGCGGCGGCTGGTAG
Upstream 100 bases:
>100_bases ACGAAAACTGATCCGCAACCCCACCCCCGCATTCGCCGTTGGACCGGCACGGCCGCCACACGGGGCGTGAAGGGCGGCGT GAACCGGCGGGAGGAAACGC
Downstream 100 bases:
>100_bases TCTGAGGAAGGCTTCTGCCATGGCCTACGAGCTGCACTACTGGCCGATGATCCCCGGCCGCGGCGAGTTCGTGCGGCTCG CCCTCGAACAGGCCGGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MGLLDQVIGGVVGQVLGGGRGGALASPVVKALLMLLLAKGGGGLGDILGRGSPESGGRSFPGPGEDDGDLGGFNQGRRSG PPSQASEAGNDLGGDFGDLAGMLDGPGVGASGSRSPGGGPYAGLDREPDDGSGAASHGLDGLIQSFERSGLGDVIGSWIG HGPNREIAPNRLADALGPGTLDSLSRETGLPREDLLAQLAQALPGVIDALTPQGRAPSREERGGW
Sequences:
>Translated_225_residues MGLLDQVIGGVVGQVLGGGRGGALASPVVKALLMLLLAKGGGGLGDILGRGSPESGGRSFPGPGEDDGDLGGFNQGRRSG PPSQASEAGNDLGGDFGDLAGMLDGPGVGASGSRSPGGGPYAGLDREPDDGSGAASHGLDGLIQSFERSGLGDVIGSWIG HGPNREIAPNRLADALGPGTLDSLSRETGLPREDLLAQLAQALPGVIDALTPQGRAPSREERGGW >Mature_224_residues GLLDQVIGGVVGQVLGGGRGGALASPVVKALLMLLLAKGGGGLGDILGRGSPESGGRSFPGPGEDDGDLGGFNQGRRSGP PSQASEAGNDLGGDFGDLAGMLDGPGVGASGSRSPGGGPYAGLDREPDDGSGAASHGLDGLIQSFERSGLGDVIGSWIGH GPNREIAPNRLADALGPGTLDSLSRETGLPREDLLAQLAQALPGVIDALTPQGRAPSREERGGW
Specific function: Unknown
COG id: COG3753
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22173; Mature: 22042
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLDQVIGGVVGQVLGGGRGGALASPVVKALLMLLLAKGGGGLGDILGRGSPESGGRSF CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCC PGPGEDDGDLGGFNQGRRSGPPSQASEAGNDLGGDFGDLAGMLDGPGVGASGSRSPGGGP CCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCC YAGLDREPDDGSGAASHGLDGLIQSFERSGLGDVIGSWIGHGPNREIAPNRLADALGPGT CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCH LDSLSRETGLPREDLLAQLAQALPGVIDALTPQGRAPSREERGGW HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure GLLDQVIGGVVGQVLGGGRGGALASPVVKALLMLLLAKGGGGLGDILGRGSPESGGRSF CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCC PGPGEDDGDLGGFNQGRRSGPPSQASEAGNDLGGDFGDLAGMLDGPGVGASGSRSPGGGP CCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCC YAGLDREPDDGSGAASHGLDGLIQSFERSGLGDVIGSWIGHGPNREIAPNRLADALGPGT CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCH LDSLSRETGLPREDLLAQLAQALPGVIDALTPQGRAPSREERGGW HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA