| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
Click here to switch to the map view.
The map label for this gene is fhuA [C]
Identifier: 218532207
GI number: 218532207
Start: 4557478
End: 4559649
Strand: Reverse
Name: fhuA [C]
Synonym: Mchl_4319
Alternate gene names: 218532207
Gene position: 4559649-4557478 (Counterclockwise)
Preceding gene: 218532209
Following gene: 218532204
Centisome position: 78.92
GC content: 71.64
Gene sequence:
>2172_bases ATGCTGCTGGCGGCGGGGACGGTGCTGACGGGCGTGCCCGGAACCGTGCTCTCGGCGCGGGCGCAGGAGGCGGCCACGCT GGAGGAGATCAGCGTGACCTCGGTGAGCCCGATCCAGGGCCGGCCCGCCGCTCCGGCGGCTCCCTCCCCCGCCGTGCCGT TCGCCCGGGCGGCCGAGGTGCTGCCGGTGGTGACGAACACCTTCTCCCCGGTCACGGTGGTGCCGCAGGAGCGGATCGCC CGCGACCAGCCGCGCACGCTCGGCGACGCACTGTTCGACCGGCCCGGCATCTCCGCCTCGACTTACGCGCCGGGGGCGGC CTCGCGGCCGATCATCCGCGGCCTCGACAACGCCCGGGTGCGCATCCAGGAGAACGGCATCGTCAACGGCGGCGTGTCGG ATCTCGGCGAGGATCACGCGGTGCCGGTCAACCCGCTCAATGCCAGCCGGATCGAGGTGATCCGCGGCCCCGCGACCCTG CGCTACGGCTCGGGGGCGATCGGCGGCGTGGTCTCGGCCGAGAACAACCAAGTGCCGACCTTCATTCCCGCCCGCGGGAT CACGGGGCAGGTCACGACGGGCTACACCACCGTCGACAACGGCCGGCTCGGGGCGGCGAGCGTCGATGCGGGCGCGAACG GCATCGCGGTCCATGCCGACGGCTTCGCGACCGCGACCGATTCCTACGCGATCCCCGGCGGCATCCAGCGCAACTCGGCG ACCGAGACGCAAGGGGGCTCGGTCGGCATCTCGGCGATCGGCGACCGCGGCTTCCTCGGCATCTCCTACAGCCACTTCAA CGCGCTCTATCAGATCCCCGGCGGCGAGGCGGCGGAAGCGCGCACCCGGCTCAACCCGAACCAGGACCGCGTGCTCGCCC GCGGTGAATACCGCCCGCTGGAAGGCCCGTTCGAGGTGCTGCGGTTCTGGGCCGGCGGCTCGGTCTACCGCCACGAGGAG ATCGGCTTCGGGCACGCCCATCACGATCACGGGGACGATGACGACCACGCGCATGAGGGCCCGGCCGGCGAGGGCGTGCA GGCGATCTTCAAGAACCGCGAGGTCGAAGCCCGGTTCGAGGCGCAGCACGTGCCGGTCTTCACCGCGCTCGGCACGCTCA CCGGCGCGGTCGGCGTCCAGACGAGCCGGCGGGTGCTCAACTCGCAGCTCGAGAGCTTCCTGCCGCCGACCGAGTCGCGG GTGCTGGCCGCCTACCTCTTCGAGGAACTGGCGGTCGGCGGGGGGCTCCGGTTCCAGGCCGCGGGCCGGATCGAGGGCGA CCGGCTCAACAGCATCGCGACGCAGTTCCCCGGCAGCTACCTTCCGACGGACGGGGACCCGCTCAGCTATGCCCTGACGC GCCGCTTCGCTCCCAAGAGCCTCAGCTTCGGCGCCCTGCAGGATCTGCCCTACGGCTTCGTGGCGAGCCTCAACGGCTCC TATGTGGAGCGTGCGCCCACCGGCGCCGAGCTGTTCTCGCAGGGGCCGCACCACGCCTCGGCGACCTTCGAGATCGGCGA TCCGACCCTGCGGCTGGAGCGCGCCCGCACCGCCGAGATCTCCTTGCGCCGGGCGGACGGGCCGCTGCGGCTCGACGCCA CCGGCTACGTCACGCGCTACACCGGCTTCATCTACCGGCGCGACACCGGGAACCGCTGCGACGACGATTTCGGCTCCTGC GGCTCCGGCGACGAGCTGCGCCAGGTCGTCTACTCGCAGGCCAATGCCAGCTTCTACGGCGCCGAGATCGGCGCGCAGCT CGATCTCTTCGCCGTCGGCGACGGCTGGGCCGGAATCGAGGCGCAGTACGACTTCGTCCGCGCCCAGTTTGACGACGGCT CCTACGTCCCGCGCATCCCGCCGCACCGGCTCGGCGGCGGCGCCTTCGTGCGGGCGAACGGCTGGTTCGCACGGGTGAAC CTGCTCCACGCCTTCGACCACACCGAGATCGCCCCGTTCGAGACCACGACCCCGGGCTGGAACGATCTTCGCGCCGAACT CGCCTACACCCAGGCGCTCGACCCCACCGTCTACGGCGCCACCGAGGTGACGCTGGGGCTGCAAGGCCGCAACCTGCTCG ACGACGACATCCGCAACTCGGCCTCGTTCAAGAAGGACGAGATCCTGCTGCCGGGCCGCAACCTCCGCCTGTTCCTGACG GCACGGTTCTGA
Upstream 100 bases:
>100_bases GCGGCAGATAAGCCTTGCAACATTGTAACATTGTCGCGATGAAACATTGTAACGTGACGAGGCTGGATCGACGGGCATGC GGGGCGGACGTTCAGGACGG
Downstream 100 bases:
>100_bases GACCGCCCCTCGCTCGCGACCCTACTTGCCGCGGGCCGGCTTCGCCGCCGGCCGCTCGGGTGGCGTGACGGCGCCCGCCA CCGTCCAGTGGCACACCGCC
Product: TonB-dependent receptor plug
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 723; Mature: 723
Protein sequence:
>723_residues MLLAAGTVLTGVPGTVLSARAQEAATLEEISVTSVSPIQGRPAAPAAPSPAVPFARAAEVLPVVTNTFSPVTVVPQERIA RDQPRTLGDALFDRPGISASTYAPGAASRPIIRGLDNARVRIQENGIVNGGVSDLGEDHAVPVNPLNASRIEVIRGPATL RYGSGAIGGVVSAENNQVPTFIPARGITGQVTTGYTTVDNGRLGAASVDAGANGIAVHADGFATATDSYAIPGGIQRNSA TETQGGSVGISAIGDRGFLGISYSHFNALYQIPGGEAAEARTRLNPNQDRVLARGEYRPLEGPFEVLRFWAGGSVYRHEE IGFGHAHHDHGDDDDHAHEGPAGEGVQAIFKNREVEARFEAQHVPVFTALGTLTGAVGVQTSRRVLNSQLESFLPPTESR VLAAYLFEELAVGGGLRFQAAGRIEGDRLNSIATQFPGSYLPTDGDPLSYALTRRFAPKSLSFGALQDLPYGFVASLNGS YVERAPTGAELFSQGPHHASATFEIGDPTLRLERARTAEISLRRADGPLRLDATGYVTRYTGFIYRRDTGNRCDDDFGSC GSGDELRQVVYSQANASFYGAEIGAQLDLFAVGDGWAGIEAQYDFVRAQFDDGSYVPRIPPHRLGGGAFVRANGWFARVN LLHAFDHTEIAPFETTTPGWNDLRAELAYTQALDPTVYGATEVTLGLQGRNLLDDDIRNSASFKKDEILLPGRNLRLFLT ARF
Sequences:
>Translated_723_residues MLLAAGTVLTGVPGTVLSARAQEAATLEEISVTSVSPIQGRPAAPAAPSPAVPFARAAEVLPVVTNTFSPVTVVPQERIA RDQPRTLGDALFDRPGISASTYAPGAASRPIIRGLDNARVRIQENGIVNGGVSDLGEDHAVPVNPLNASRIEVIRGPATL RYGSGAIGGVVSAENNQVPTFIPARGITGQVTTGYTTVDNGRLGAASVDAGANGIAVHADGFATATDSYAIPGGIQRNSA TETQGGSVGISAIGDRGFLGISYSHFNALYQIPGGEAAEARTRLNPNQDRVLARGEYRPLEGPFEVLRFWAGGSVYRHEE IGFGHAHHDHGDDDDHAHEGPAGEGVQAIFKNREVEARFEAQHVPVFTALGTLTGAVGVQTSRRVLNSQLESFLPPTESR VLAAYLFEELAVGGGLRFQAAGRIEGDRLNSIATQFPGSYLPTDGDPLSYALTRRFAPKSLSFGALQDLPYGFVASLNGS YVERAPTGAELFSQGPHHASATFEIGDPTLRLERARTAEISLRRADGPLRLDATGYVTRYTGFIYRRDTGNRCDDDFGSC GSGDELRQVVYSQANASFYGAEIGAQLDLFAVGDGWAGIEAQYDFVRAQFDDGSYVPRIPPHRLGGGAFVRANGWFARVN LLHAFDHTEIAPFETTTPGWNDLRAELAYTQALDPTVYGATEVTLGLQGRNLLDDDIRNSASFKKDEILLPGRNLRLFLT ARF >Mature_723_residues MLLAAGTVLTGVPGTVLSARAQEAATLEEISVTSVSPIQGRPAAPAAPSPAVPFARAAEVLPVVTNTFSPVTVVPQERIA RDQPRTLGDALFDRPGISASTYAPGAASRPIIRGLDNARVRIQENGIVNGGVSDLGEDHAVPVNPLNASRIEVIRGPATL RYGSGAIGGVVSAENNQVPTFIPARGITGQVTTGYTTVDNGRLGAASVDAGANGIAVHADGFATATDSYAIPGGIQRNSA TETQGGSVGISAIGDRGFLGISYSHFNALYQIPGGEAAEARTRLNPNQDRVLARGEYRPLEGPFEVLRFWAGGSVYRHEE IGFGHAHHDHGDDDDHAHEGPAGEGVQAIFKNREVEARFEAQHVPVFTALGTLTGAVGVQTSRRVLNSQLESFLPPTESR VLAAYLFEELAVGGGLRFQAAGRIEGDRLNSIATQFPGSYLPTDGDPLSYALTRRFAPKSLSFGALQDLPYGFVASLNGS YVERAPTGAELFSQGPHHASATFEIGDPTLRLERARTAEISLRRADGPLRLDATGYVTRYTGFIYRRDTGNRCDDDFGSC GSGDELRQVVYSQANASFYGAEIGAQLDLFAVGDGWAGIEAQYDFVRAQFDDGSYVPRIPPHRLGGGAFVRANGWFARVN LLHAFDHTEIAPFETTTPGWNDLRAELAYTQALDPTVYGATEVTLGLQGRNLLDDDIRNSASFKKDEILLPGRNLRLFLT ARF
Specific function: Probable receptor, tonB-dependent [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 77013; Mature: 77013
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.1 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.1 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLAAGTVLTGVPGTVLSARAQEAATLEEISVTSVSPIQGRPAAPAAPSPAVPFARAAEV CEEECCEEECCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHH LPVVTNTFSPVTVVPQERIARDQPRTLGDALFDRPGISASTYAPGAASRPIIRGLDNARV HHHHHCCCCCEEECCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCEE RIQENGIVNGGVSDLGEDHAVPVNPLNASRIEVIRGPATLRYGSGAIGGVVSAENNQVPT EEECCCEEECCHHHCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCEEECCCCCCCE FIPARGITGQVTTGYTTVDNGRLGAASVDAGANGIAVHADGFATATDSYAIPGGIQRNSA EEECCCCCCEEEECEEEECCCCCCCEEECCCCCEEEEECCCCEECCCCCCCCCCCCCCCC TETQGGSVGISAIGDRGFLGISYSHFNALYQIPGGEAAEARTRLNPNQDRVLARGEYRPL CCCCCCEEEEEEECCCCEEEEEHHHCEEEEECCCCCHHHHHHCCCCCCCCEEECCCCCCC EGPFEVLRFWAGGSVYRHEEIGFGHAHHDHGDDDDHAHEGPAGEGVQAIFKNREVEARFE CCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEC AQHVPVFTALGTLTGAVGVQTSRRVLNSQLESFLPPTESRVLAAYLFEELAVGGGLRFQA CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEE AGRIEGDRLNSIATQFPGSYLPTDGDPLSYALTRRFAPKSLSFGALQDLPYGFVASLNGS CCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHCCCCEEEECCCC YVERAPTGAELFSQGPHHASATFEIGDPTLRLERARTAEISLRRADGPLRLDATGYVTRY EEECCCCCHHHHCCCCCCCCEEEEECCCEEEEECCCEEEEEEEECCCCEEECCCCEEEEE TGFIYRRDTGNRCDDDFGSCGSGDELRQVVYSQANASFYGAEIGAQLDLFAVGDGWAGIE EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCCC AQYDFVRAQFDDGSYVPRIPPHRLGGGAFVRANGWFARVNLLHAFDHTEIAPFETTTPGW EEEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCEEEEEEEEEECCCCCCCCCCCCCCCH NDLRAELAYTQALDPTVYGATEVTLGLQGRNLLDDDIRNSASFKKDEILLPGRNLRLFLT HHHHHHHHHHHCCCCCEECCEEEEEEECCCCCCCHHHHCCCCCCCCEEEECCCCEEEEEE ARF ECC >Mature Secondary Structure MLLAAGTVLTGVPGTVLSARAQEAATLEEISVTSVSPIQGRPAAPAAPSPAVPFARAAEV CEEECCEEECCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHH LPVVTNTFSPVTVVPQERIARDQPRTLGDALFDRPGISASTYAPGAASRPIIRGLDNARV HHHHHCCCCCEEECCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCEE RIQENGIVNGGVSDLGEDHAVPVNPLNASRIEVIRGPATLRYGSGAIGGVVSAENNQVPT EEECCCEEECCHHHCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCEEECCCCCCCE FIPARGITGQVTTGYTTVDNGRLGAASVDAGANGIAVHADGFATATDSYAIPGGIQRNSA EEECCCCCCEEEECEEEECCCCCCCEEECCCCCEEEEECCCCEECCCCCCCCCCCCCCCC TETQGGSVGISAIGDRGFLGISYSHFNALYQIPGGEAAEARTRLNPNQDRVLARGEYRPL CCCCCCEEEEEEECCCCEEEEEHHHCEEEEECCCCCHHHHHHCCCCCCCCEEECCCCCCC EGPFEVLRFWAGGSVYRHEEIGFGHAHHDHGDDDDHAHEGPAGEGVQAIFKNREVEARFE CCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEC AQHVPVFTALGTLTGAVGVQTSRRVLNSQLESFLPPTESRVLAAYLFEELAVGGGLRFQA CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEE AGRIEGDRLNSIATQFPGSYLPTDGDPLSYALTRRFAPKSLSFGALQDLPYGFVASLNGS CCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHCCCCEEEECCCC YVERAPTGAELFSQGPHHASATFEIGDPTLRLERARTAEISLRRADGPLRLDATGYVTRY EEECCCCCHHHHCCCCCCCCEEEEECCCEEEEECCCEEEEEEEECCCCEEECCCCEEEEE TGFIYRRDTGNRCDDDFGSCGSGDELRQVVYSQANASFYGAEIGAQLDLFAVGDGWAGIE EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCCC AQYDFVRAQFDDGSYVPRIPPHRLGGGAFVRANGWFARVNLLHAFDHTEIAPFETTTPGW EEEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCEEEEEEEEEECCCCCCCCCCCCCCCH NDLRAELAYTQALDPTVYGATEVTLGLQGRNLLDDDIRNSASFKKDEILLPGRNLRLFLT HHHHHHHHHHHCCCCCEECCEEEEEEECCCCCCCHHHHCCCCCCCCEEEECCCCEEEEEE ARF ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]