| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
Click here to switch to the map view.
The map label for this gene is wcaL [C]
Identifier: 218532136
GI number: 218532136
Start: 4473483
End: 4474700
Strand: Reverse
Name: wcaL [C]
Synonym: Mchl_4248
Alternate gene names: 218532136
Gene position: 4474700-4473483 (Counterclockwise)
Preceding gene: 218532137
Following gene: 218532135
Centisome position: 77.44
GC content: 50.66
Gene sequence:
>1218_bases ATGTCAGGCAAGCTACTCTCCGTGAACGCGTACCACTACAGACGCGGTGGCTCGGACGTCGCATACTTCGCTCATGCCGA AGCGATGGAACGTTGCGGGTGGGAACCTCTGTTTTTTTCGATGAAGCATCCCCAAAATTACGAGTACGCTTATGACCATC TGTTTGCTGAGCGGGTCGACTACGACCACGACACGTCTGTAGCGGAGAAATTCCGCGACGCTGCTAGGATCGTTTACTCA CTGGACGCACGGAAGAAGTTAAAGAAGCTTCTTGCACAACATGACGTCCAAATTGCCCACATTCACAATATATATCATCA TATTTCACCTTCGATTTTACCGCTTCTCACTGACCGAAAAATTCCGGTAGTCATGACGGCGCACGACCTCAAACTTCTGT GTCCAAATTATAAAATGCTGAACCAACTCGGCGTGTGCCAGTCTTGTAAGGGAGGGCGTTACTGGAACACTGTGAGGTAC AAATGCATAAAAAGCTCGTTGCTCGGCAGTCTCTTGATTGCGTTTGAGTCAGCCGTACACAGCATATTCCAGATTTATAA AGACAACGTCTCTAAACTCGTTGTGCCAAGCGAGTTTTATCGGGGGCTGTTCCTGGAGTGGGGCTGGCCGGATGACAAAC TAGTCTATATTCCCAATGCAGTTAAGTCGCGTCCGCCTCTTGCATTTGCAGACAAAAATCGGTATATACTGTATTTTGGG AGGCTGTCCGAGGAAAAGGGATTGAAGACGTTAATAGAAGCATCCGCCCGCAGCTCTACGCCTGTGTACATCGCTGGAAC TGGCCCGCAGTGCGCCGAGCTACATGCATTATCGGACCAGATTCGTGCACCGGTTCGCTTCCTAGGACGATTAGAGGCGG AGGCTCTGGAAAGGGCGGTAGCTGGGAGTTGCGCTACCGTCCTACCTTCAGAGTGGTTTGAAAATGCGCCGTTAAGCATT TTGGAGTCTTATAGTTACGGCCGGCCAGTTATCGGCGCCCGGATAGGCGGCATTCCGGAATTGATCAACGATGGCTGCAC GGGCTACACTTTTCAACCAGGAGACCCCGTTGAGCTCGCAGAATTGCTTCGACAGGTCTTCGAAACTCCAGTCAGCAGCC TTGCTTCAATGGGCGGGAGAGGGCGTCACTGGGCCGAGTTGCGGTTTAATGTTAACACCTATACTGAAGCGATGACTAGT TTGTACAACGAATTATAG
Upstream 100 bases:
>100_bases GCAATTTAGGCAACATTTCACCTGGGAAATAGTCCTTAGAGCGTACGAAGACATCTTATACGATGCTCCATTATGACCCT TCTGCAACGGTGTGTCTAAT
Downstream 100 bases:
>100_bases CAGCGCCTGTGCTCGGGGTTTGGCAATGAATGATCTTATTATAGCCACTATGTGGCGGAAAAAACTTAGCGTAGGGCTTG CCATACTCTTCCCATTATGT
Product: glycosyl transferase group 1
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Transferase; Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Lipopolysaccharide N-Acetylglucosaminyltransferase; Glycosyltransferase Protein; Capsular Polysaccharide Bisynthesis Glycosyl Transferase; LPS Biosynthesis RfbU Related Protein; Glycosyl Transferase Group 1 Protein; Polysaccharide Biosynthesis Protein; Group 1 Glycosyl Transferase Protein; Lipopolysaccharide N-Acetyl-Glycoaminyltransferase; Glycosyl Transferase GT4 Family Protein; Glycosyl Transferase Family Protein; Glucosyltransferase
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MSGKLLSVNAYHYRRGGSDVAYFAHAEAMERCGWEPLFFSMKHPQNYEYAYDHLFAERVDYDHDTSVAEKFRDAARIVYS LDARKKLKKLLAQHDVQIAHIHNIYHHISPSILPLLTDRKIPVVMTAHDLKLLCPNYKMLNQLGVCQSCKGGRYWNTVRY KCIKSSLLGSLLIAFESAVHSIFQIYKDNVSKLVVPSEFYRGLFLEWGWPDDKLVYIPNAVKSRPPLAFADKNRYILYFG RLSEEKGLKTLIEASARSSTPVYIAGTGPQCAELHALSDQIRAPVRFLGRLEAEALERAVAGSCATVLPSEWFENAPLSI LESYSYGRPVIGARIGGIPELINDGCTGYTFQPGDPVELAELLRQVFETPVSSLASMGGRGRHWAELRFNVNTYTEAMTS LYNEL
Sequences:
>Translated_405_residues MSGKLLSVNAYHYRRGGSDVAYFAHAEAMERCGWEPLFFSMKHPQNYEYAYDHLFAERVDYDHDTSVAEKFRDAARIVYS LDARKKLKKLLAQHDVQIAHIHNIYHHISPSILPLLTDRKIPVVMTAHDLKLLCPNYKMLNQLGVCQSCKGGRYWNTVRY KCIKSSLLGSLLIAFESAVHSIFQIYKDNVSKLVVPSEFYRGLFLEWGWPDDKLVYIPNAVKSRPPLAFADKNRYILYFG RLSEEKGLKTLIEASARSSTPVYIAGTGPQCAELHALSDQIRAPVRFLGRLEAEALERAVAGSCATVLPSEWFENAPLSI LESYSYGRPVIGARIGGIPELINDGCTGYTFQPGDPVELAELLRQVFETPVSSLASMGGRGRHWAELRFNVNTYTEAMTS LYNEL >Mature_404_residues SGKLLSVNAYHYRRGGSDVAYFAHAEAMERCGWEPLFFSMKHPQNYEYAYDHLFAERVDYDHDTSVAEKFRDAARIVYSL DARKKLKKLLAQHDVQIAHIHNIYHHISPSILPLLTDRKIPVVMTAHDLKLLCPNYKMLNQLGVCQSCKGGRYWNTVRYK CIKSSLLGSLLIAFESAVHSIFQIYKDNVSKLVVPSEFYRGLFLEWGWPDDKLVYIPNAVKSRPPLAFADKNRYILYFGR LSEEKGLKTLIEASARSSTPVYIAGTGPQCAELHALSDQIRAPVRFLGRLEAEALERAVAGSCATVLPSEWFENAPLSIL ESYSYGRPVIGARIGGIPELINDGCTGYTFQPGDPVELAELLRQVFETPVSSLASMGGRGRHWAELRFNVNTYTEAMTSL YNEL
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.-.-.- [C]
Molecular weight: Translated: 45711; Mature: 45580
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKLLSVNAYHYRRGGSDVAYFAHAEAMERCGWEPLFFSMKHPQNYEYAYDHLFAERVD CCCCEEEEECHHEECCCCCEEEHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCC YDHDTSVAEKFRDAARIVYSLDARKKLKKLLAQHDVQIAHIHNIYHHISPSILPLLTDRK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCC IPVVMTAHDLKLLCPNYKMLNQLGVCQSCKGGRYWNTVRYKCIKSSLLGSLLIAFESAVH CCEEEEECCCEEECCCHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SIFQIYKDNVSKLVVPSEFYRGLFLEWGWPDDKLVYIPNAVKSRPPLAFADKNRYILYFG HHHHHHHHCHHEEECCHHHHCCEEEECCCCCCEEEECCCCCCCCCCEEEECCCCEEEEEE RLSEEKGLKTLIEASARSSTPVYIAGTGPQCAELHALSDQIRAPVRFLGRLEAEALERAV CCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGSCATVLPSEWFENAPLSILESYSYGRPVIGARIGGIPELINDGCTGYTFQPGDPVELA HCCHHHHCCHHHHCCCCHHHHHHCCCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCHHHHH ELLRQVFETPVSSLASMGGRGRHWAELRFNVNTYTEAMTSLYNEL HHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHCC >Mature Secondary Structure SGKLLSVNAYHYRRGGSDVAYFAHAEAMERCGWEPLFFSMKHPQNYEYAYDHLFAERVD CCCEEEEECHHEECCCCCEEEHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCC YDHDTSVAEKFRDAARIVYSLDARKKLKKLLAQHDVQIAHIHNIYHHISPSILPLLTDRK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCC IPVVMTAHDLKLLCPNYKMLNQLGVCQSCKGGRYWNTVRYKCIKSSLLGSLLIAFESAVH CCEEEEECCCEEECCCHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SIFQIYKDNVSKLVVPSEFYRGLFLEWGWPDDKLVYIPNAVKSRPPLAFADKNRYILYFG HHHHHHHHCHHEEECCHHHHCCEEEECCCCCCEEEECCCCCCCCCCEEEECCCCEEEEEE RLSEEKGLKTLIEASARSSTPVYIAGTGPQCAELHALSDQIRAPVRFLGRLEAEALERAV CCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGSCATVLPSEWFENAPLSILESYSYGRPVIGARIGGIPELINDGCTGYTFQPGDPVELA HCCHHHHCCHHHHCCCCHHHHHHCCCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCHHHHH ELLRQVFETPVSSLASMGGRGRHWAELRFNVNTYTEAMTSLYNEL HHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA