| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is 218532126
Identifier: 218532126
GI number: 218532126
Start: 4448769
End: 4449725
Strand: Reverse
Name: 218532126
Synonym: Mchl_4221
Alternate gene names: NA
Gene position: 4449725-4448769 (Counterclockwise)
Preceding gene: 218532130
Following gene: 218532125
Centisome position: 77.01
GC content: 70.64
Gene sequence:
>957_bases ATGGGTTGGACGAGACGGGACGTCCTCGGCTGCGGCGCCGCTGCGGTCGCGGCCACGGCGGCGGGCGGAGCCTTCGCGCA GACCTATCCGAGCCGCCCGATCGAACTCGTCGTCCCCTGGGGGCCGGGCGGCGGCGCCGACCAGCTCGCACGCAAGATCG CGCAACTCGCCGAGCCCATGCTCGGCCAGGGGCTCCCGGTGGTGAACGTGCCCGGCGGCACGGGCGCGACCGGCATGGCC AAGCTGCTCGCCAACCCCGCCGACGGCCAGACAGCGGCGATCTACATCGCCGACTCGCACGCGCTGCTCGCCGGGACGGG CGCGCGCTGGAAGATCGAGGACATCGTTCCGGCCGCGGTGCTGATCCAGGCGCCGTCCTTCCTGTTCGTCGGACAGGACA GCCGCTTCAAGACCTGGGCCGAGTTCGCGCAGGAGGCCCAGACGAAGCCGGGCACGCTCAAGGTCGCGACCCTGGGCTTC GGCAGCGTCGACGACTTCACCCTGAAATTCCTGGGCGCCAAGGGCGTCAAGGTCAATCCGGTGCCGTTCGCCAAGCCGGG CGAGCGTTACGTCTCGATCCTCGGCGGTCACGCGGACGCGCTCTACGAGCAGGCCGGCGACGTCGGGACCTTCCTCGCGG GCCGGCAGATGCGGCCTCTCCTGGTGTTCGGCCGGCAGCGGTTCCCAGCCTTTCCCGACATACCGTGCTCGACGGAGGTC GGCTTCGACATCGCGCTTCCGCAGTTCCGCTCGCTCGTCGTCCGGGCCGGAACCCCGCAGGACCGCGTCGACACGCTGTC CGCCACGCTCGCCAAGGTCGCCGGCAGCGACGATTACAAGGCGTTCCTCAAGGAGCAGTACGCGGATGAGGCCAGCTTCC TCTCGGCCGCGCAGGCGGGTGATTTCGTCCGCCGGCAACTCGACGACATGAAGGCCGCCCTCAGGCAGGCGTCGTGA
Upstream 100 bases:
>100_bases TGAACTTTATTGCCGGTCCTGTCGTCGTTAATCTGCGCTCCGGTGACGCGGCGACGGATCGGGACAAACCGGCAGAGACC CGCGCAACGGGAGAAGCGCC
Downstream 100 bases:
>100_bases GATGGCGGGCGAGAGCGCCGGGCGCGCGAACGGATTGGGCGCACGCATCGCGCCCGCGATCCCCTATCTCCTGCTGCTGG CCGTCACGATCTGGCTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MGWTRRDVLGCGAAAVAATAAGGAFAQTYPSRPIELVVPWGPGGGADQLARKIAQLAEPMLGQGLPVVNVPGGTGATGMA KLLANPADGQTAAIYIADSHALLAGTGARWKIEDIVPAAVLIQAPSFLFVGQDSRFKTWAEFAQEAQTKPGTLKVATLGF GSVDDFTLKFLGAKGVKVNPVPFAKPGERYVSILGGHADALYEQAGDVGTFLAGRQMRPLLVFGRQRFPAFPDIPCSTEV GFDIALPQFRSLVVRAGTPQDRVDTLSATLAKVAGSDDYKAFLKEQYADEASFLSAAQAGDFVRRQLDDMKAALRQAS
Sequences:
>Translated_318_residues MGWTRRDVLGCGAAAVAATAAGGAFAQTYPSRPIELVVPWGPGGGADQLARKIAQLAEPMLGQGLPVVNVPGGTGATGMA KLLANPADGQTAAIYIADSHALLAGTGARWKIEDIVPAAVLIQAPSFLFVGQDSRFKTWAEFAQEAQTKPGTLKVATLGF GSVDDFTLKFLGAKGVKVNPVPFAKPGERYVSILGGHADALYEQAGDVGTFLAGRQMRPLLVFGRQRFPAFPDIPCSTEV GFDIALPQFRSLVVRAGTPQDRVDTLSATLAKVAGSDDYKAFLKEQYADEASFLSAAQAGDFVRRQLDDMKAALRQAS >Mature_317_residues GWTRRDVLGCGAAAVAATAAGGAFAQTYPSRPIELVVPWGPGGGADQLARKIAQLAEPMLGQGLPVVNVPGGTGATGMAK LLANPADGQTAAIYIADSHALLAGTGARWKIEDIVPAAVLIQAPSFLFVGQDSRFKTWAEFAQEAQTKPGTLKVATLGFG SVDDFTLKFLGAKGVKVNPVPFAKPGERYVSILGGHADALYEQAGDVGTFLAGRQMRPLLVFGRQRFPAFPDIPCSTEVG FDIALPQFRSLVVRAGTPQDRVDTLSATLAKVAGSDDYKAFLKEQYADEASFLSAAQAGDFVRRQLDDMKAALRQAS
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33426; Mature: 33295
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWTRRDVLGCGAAAVAATAAGGAFAQTYPSRPIELVVPWGPGGGADQLARKIAQLAEPM CCCCHHHHHHCCHHHHHHHHCCCHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH LGQGLPVVNVPGGTGATGMAKLLANPADGQTAAIYIADSHALLAGTGARWKIEDIVPAAV HHCCCCEEECCCCCCHHHHHHHHCCCCCCCEEEEEEECCCEEEECCCCCEEHHHHCCHHH LIQAPSFLFVGQDSRFKTWAEFAQEAQTKPGTLKVATLGFGSVDDFTLKFLGAKGVKVNP EEECCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHEEECCCCCEECC VPFAKPGERYVSILGGHADALYEQAGDVGTFLAGRQMRPLLVFGRQRFPAFPDIPCSTEV CCCCCCCHHHHHHHCCCHHHHHHHCCCHHHHHCCCCCCHHEEECCCCCCCCCCCCCCCCC GFDIALPQFRSLVVRAGTPQDRVDTLSATLAKVAGSDDYKAFLKEQYADEASFLSAAQAG CCEEECHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH DFVRRQLDDMKAALRQAS HHHHHHHHHHHHHHHHCC >Mature Secondary Structure GWTRRDVLGCGAAAVAATAAGGAFAQTYPSRPIELVVPWGPGGGADQLARKIAQLAEPM CCCHHHHHHCCHHHHHHHHCCCHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH LGQGLPVVNVPGGTGATGMAKLLANPADGQTAAIYIADSHALLAGTGARWKIEDIVPAAV HHCCCCEEECCCCCCHHHHHHHHCCCCCCCEEEEEEECCCEEEECCCCCEEHHHHCCHHH LIQAPSFLFVGQDSRFKTWAEFAQEAQTKPGTLKVATLGFGSVDDFTLKFLGAKGVKVNP EEECCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHEEECCCCCEECC VPFAKPGERYVSILGGHADALYEQAGDVGTFLAGRQMRPLLVFGRQRFPAFPDIPCSTEV CCCCCCCHHHHHHHCCCHHHHHHHCCCHHHHHCCCCCCHHEEECCCCCCCCCCCCCCCCC GFDIALPQFRSLVVRAGTPQDRVDTLSATLAKVAGSDDYKAFLKEQYADEASFLSAAQAG CCEEECHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH DFVRRQLDDMKAALRQAS HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]