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The map label for this gene is yjgI [C]

Identifier: 218532084

GI number: 218532084

Start: 4405067

End: 4405768

Strand: Reverse

Name: yjgI [C]

Synonym: Mchl_4178

Alternate gene names: 218532084

Gene position: 4405768-4405067 (Counterclockwise)

Preceding gene: 218532085

Following gene: 218532082

Centisome position: 76.25

GC content: 71.65

Gene sequence:

>702_bases
ATGGTCCCGACCTACCAGCGCGCCCTGATCGTCGGTGCCGGCCCCGGCCTGAGCGCCTCGCTGGCGCGCCTGTTCGCGGC
CGAGGGTCTGAAGGTCGGGCTCGCCGCGCGCAACACCGAAAAACTCAACGACCTCGCCGCGGAGACGGGGGCCGTCATCC
ATGCCTGCGATGCCACCGACCCAAGTGCGGTCGAGGCCCTGTTCCCCCGGCTCGAACCGGCGCTCGGCGGTGCGCCGGAC
GTGGTGGTCTACAATGCCAGCGGACGGCTGCGCGGGGCCACCGTTGATCTCGATCCGGAGGCGGTGGCCCGCGCCCTCTC
GGTCTCGGCCTATGGCGGCTTCCTCGTGGCGCAGGCCGCCGCCCGGCGGATGCTGCCCCACCGCCACGGCGCGATCCTGT
TCACCGGTGCCTCGGCGAGCGTAAAGGGATTTGCGGGCTCGGCCCCCTTCGCCATGGGCAAGTTCGCCCTGCGCGGCCTC
GCGCAGAGCCTTGCCCGGGAGCTTCAGCCCCAGGGCATCCATGTCGCCCATGTCGTGATCGACGGCGCCATCCGCTCCGC
CGCCCGGCCTGATCCAGAGGACCATCCCGACGCGACCCTCGATCCGGACGCCATCGCGAAGGGCTACCTCGCCCTCCTGC
GCCAGGATCGCAGCGCCTGGACCAACGAGATCACCCTGCGGCCGTGGGTCGAGCGCTTTTGA

Upstream 100 bases:

>100_bases
CGGGGGTGAGCCGGGAGAGGCGTCGGGGCGGAGCGTCGAACCGCGGCTGCAGGCGGCGCGTTCGATCCTTCGTCCCCGTA
CCGCACCGGAGCCCCCTCCC

Downstream 100 bases:

>100_bases
GGAACTACGCCGCCAGGAAAGCCTGCAACGCCCGCAACGTCGGCTCCGGCGCCTCCTCGGCCATGAAGTGGCCGGAGGCG
ATGCGGGCGCCCTGCGCTCG

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MVPTYQRALIVGAGPGLSASLARLFAAEGLKVGLAARNTEKLNDLAAETGAVIHACDATDPSAVEALFPRLEPALGGAPD
VVVYNASGRLRGATVDLDPEAVARALSVSAYGGFLVAQAAARRMLPHRHGAILFTGASASVKGFAGSAPFAMGKFALRGL
AQSLARELQPQGIHVAHVVIDGAIRSAARPDPEDHPDATLDPDAIAKGYLALLRQDRSAWTNEITLRPWVERF

Sequences:

>Translated_233_residues
MVPTYQRALIVGAGPGLSASLARLFAAEGLKVGLAARNTEKLNDLAAETGAVIHACDATDPSAVEALFPRLEPALGGAPD
VVVYNASGRLRGATVDLDPEAVARALSVSAYGGFLVAQAAARRMLPHRHGAILFTGASASVKGFAGSAPFAMGKFALRGL
AQSLARELQPQGIHVAHVVIDGAIRSAARPDPEDHPDATLDPDAIAKGYLALLRQDRSAWTNEITLRPWVERF
>Mature_233_residues
MVPTYQRALIVGAGPGLSASLARLFAAEGLKVGLAARNTEKLNDLAAETGAVIHACDATDPSAVEALFPRLEPALGGAPD
VVVYNASGRLRGATVDLDPEAVARALSVSAYGGFLVAQAAARRMLPHRHGAILFTGASASVKGFAGSAPFAMGKFALRGL
AQSLARELQPQGIHVAHVVIDGAIRSAARPDPEDHPDATLDPDAIAKGYLALLRQDRSAWTNEITLRPWVERF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI40254992, Length=195, Percent_Identity=28.2051282051282, Blast_Score=68, Evalue=5e-12,
Organism=Escherichia coli, GI2367365, Length=192, Percent_Identity=32.2916666666667, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787335, Length=182, Percent_Identity=29.1208791208791, Blast_Score=66, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17536025, Length=176, Percent_Identity=30.1136363636364, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28571387, Length=242, Percent_Identity=28.099173553719, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 24346; Mature: 24346

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPTYQRALIVGAGPGLSASLARLFAAEGLKVGLAARNTEKLNDLAAETGAVIHACDATD
CCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCEEEEECCCC
PSAVEALFPRLEPALGGAPDVVVYNASGRLRGATVDLDPEAVARALSVSAYGGFLVAQAA
HHHHHHHHHHHHHCCCCCCCEEEECCCCCEECCEECCCHHHHHHHHHHHHHCHHHHHHHH
ARRMLPHRHGAILFTGASASVKGFAGSAPFAMGKFALRGLAQSLARELQPQGIHVAHVVI
HHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
DGAIRSAARPDPEDHPDATLDPDAIAKGYLALLRQDRSAWTNEITLRPWVERF
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECHHHHCC
>Mature Secondary Structure
MVPTYQRALIVGAGPGLSASLARLFAAEGLKVGLAARNTEKLNDLAAETGAVIHACDATD
CCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCEEEEECCCC
PSAVEALFPRLEPALGGAPDVVVYNASGRLRGATVDLDPEAVARALSVSAYGGFLVAQAA
HHHHHHHHHHHHHCCCCCCCEEEECCCCCEECCEECCCHHHHHHHHHHHHHCHHHHHHHH
ARRMLPHRHGAILFTGASASVKGFAGSAPFAMGKFALRGLAQSLARELQPQGIHVAHVVI
HHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
DGAIRSAARPDPEDHPDATLDPDAIAKGYLALLRQDRSAWTNEITLRPWVERF
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146 [H]