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The map label for this gene is allC [C]

Identifier: 218531959

GI number: 218531959

Start: 4262788

End: 4264089

Strand: Reverse

Name: allC [C]

Synonym: Mchl_4047

Alternate gene names: 218531959

Gene position: 4264089-4262788 (Counterclockwise)

Preceding gene: 218531960

Following gene: 218531958

Centisome position: 73.8

GC content: 72.58

Gene sequence:

>1302_bases
ATGACATCCATGCCCGACATGATGGCCTTCGCCCCCGTGCGGATCGACCCCGCCCGCCTCCAGGCGATGATGGAGGCTGT
CTCCGCCTTCGGCGCCGGGCCGGAGGGCGCCCTGACCCGCCTGACCCTGTCGCCGGAGGACGGGCAGGCGCGCGACTGGC
TCGCCGCGTGGTTTTCCGCGCACGGCTTCACCCCGCGGGTCGATGCGATCGGCAATCAGTTCGGCTGTCTGGAACTGGCT
GGCCCCAGCGCGCCCACGGTGATGGTCGGCTCGCATCTCGACAGCCAGCCCAATGGCGGGCGCTTCGACGGCACGCTCGG
CGTGCTCGCCGCCTGCGAGGCGATTCTGTCCGTGCGCGCGGCGCTCGAAGCGGCGGGCAGGATGTCGGCCTGCAACTTCA
CGGTCGCCAACTGGACCAACGAGGAGGGCGCCCGCTTTCAGCCGAGCCTGCTCGGCAGCAGCGTCTTCACCGGTGCGGCC
GGGCTCGACTGGGCGCTGGCCCGCAGCGACGGCGACGGCGTCACCGTCGGCGAGGCCCTGTCGCGGATCGGCTATGCCGG
GAGCGACGCCGTGCCGGTGCCGGACGCCTTCATCGAGCTGCATATCGAAGGCGGGCCGATCCTGGAGCGCGAGGGCCTGC
GCTTCGGCGCCTTCACCCGCTACTGGGGCGCCACCAAGTACCGCCTCGCCTTCCTCGGACGCCAGGCCCATACCGGCCCG
ACGCCGATGGCCGAGCGGCGCGACGCGCTTCTCGGCGCCGCCTACCTGATCGCCGACCTCAAGGCCATGACGGCCGATTA
CGGCCTCGACCTGCACACCTCCGTCGGCCGGCTCGAAGTGCGGCCGAACTCGCCCAACACCGTGCCGAGCGAGGCGGTTC
TGTTCATCGAGCTGCGCTCCGGCTCGCCCGCGATCTTGGAGGAGGCCGAACTCCGGCTGAAGGCGGCCATCGATCTGGCT
GCCGCGCGCGCGGAGGTGGGTCACGAGGTGCGCGCCATCGACCGGCGCGCCGCCGGCCCGATGGCGCCAGGCCTCGTGCG
GCTTGCCGAGCGCGCGGGCACGGCCAACGGCACGACGACGCGCCACCTCGACACGATCGGCGGCCACGACGCCGTCAGCC
TCAGCGCGGTCTGCCCCTCGGTGGTGCTGGCCGTGCCCTGCCGCGGCGGCGTGATGCACCACCCGACCGAGTTCACGAGC
CCGGAGGATCAGGCCTTCGGTACCCAGGTGCTGGCCGACATGCTGATGACCCTCGCCACCGAGGGCATGGCCGCCCTCGA
GACCGCGGGAGGGGACCGGTGA

Upstream 100 bases:

>100_bases
TGCGCGGCGCGCACGACTTCGCCGCCTGCCACCGCGTGCCGGGCGCCGGCGCCGCCCTGCTGGCGGGCGCTGCCTGATGC
CGCTCCTTCCCGAGACATCG

Downstream 100 bases:

>100_bases
AGGCGCTGGGCACCCCCGAGGACGCGCCCGAGCGGCTGGCCGAGGCCGCCCTGGCGCAGGCTTTCTCCGCGCGGCCCGAC
CTTCGGGGCAAAGCGCCGCA

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MTSMPDMMAFAPVRIDPARLQAMMEAVSAFGAGPEGALTRLTLSPEDGQARDWLAAWFSAHGFTPRVDAIGNQFGCLELA
GPSAPTVMVGSHLDSQPNGGRFDGTLGVLAACEAILSVRAALEAAGRMSACNFTVANWTNEEGARFQPSLLGSSVFTGAA
GLDWALARSDGDGVTVGEALSRIGYAGSDAVPVPDAFIELHIEGGPILEREGLRFGAFTRYWGATKYRLAFLGRQAHTGP
TPMAERRDALLGAAYLIADLKAMTADYGLDLHTSVGRLEVRPNSPNTVPSEAVLFIELRSGSPAILEEAELRLKAAIDLA
AARAEVGHEVRAIDRRAAGPMAPGLVRLAERAGTANGTTTRHLDTIGGHDAVSLSAVCPSVVLAVPCRGGVMHHPTEFTS
PEDQAFGTQVLADMLMTLATEGMAALETAGGDR

Sequences:

>Translated_433_residues
MTSMPDMMAFAPVRIDPARLQAMMEAVSAFGAGPEGALTRLTLSPEDGQARDWLAAWFSAHGFTPRVDAIGNQFGCLELA
GPSAPTVMVGSHLDSQPNGGRFDGTLGVLAACEAILSVRAALEAAGRMSACNFTVANWTNEEGARFQPSLLGSSVFTGAA
GLDWALARSDGDGVTVGEALSRIGYAGSDAVPVPDAFIELHIEGGPILEREGLRFGAFTRYWGATKYRLAFLGRQAHTGP
TPMAERRDALLGAAYLIADLKAMTADYGLDLHTSVGRLEVRPNSPNTVPSEAVLFIELRSGSPAILEEAELRLKAAIDLA
AARAEVGHEVRAIDRRAAGPMAPGLVRLAERAGTANGTTTRHLDTIGGHDAVSLSAVCPSVVLAVPCRGGVMHHPTEFTS
PEDQAFGTQVLADMLMTLATEGMAALETAGGDR
>Mature_432_residues
TSMPDMMAFAPVRIDPARLQAMMEAVSAFGAGPEGALTRLTLSPEDGQARDWLAAWFSAHGFTPRVDAIGNQFGCLELAG
PSAPTVMVGSHLDSQPNGGRFDGTLGVLAACEAILSVRAALEAAGRMSACNFTVANWTNEEGARFQPSLLGSSVFTGAAG
LDWALARSDGDGVTVGEALSRIGYAGSDAVPVPDAFIELHIEGGPILEREGLRFGAFTRYWGATKYRLAFLGRQAHTGPT
PMAERRDALLGAAYLIADLKAMTADYGLDLHTSVGRLEVRPNSPNTVPSEAVLFIELRSGSPAILEEAELRLKAAIDLAA
ARAEVGHEVRAIDRRAAGPMAPGLVRLAERAGTANGTTTRHLDTIGGHDAVSLSAVCPSVVLAVPCRGGVMHHPTEFTSP
EDQAFGTQVLADMLMTLATEGMAALETAGGDR

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=404, Percent_Identity=29.4554455445545, Blast_Score=167, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: 3.5.3.- [C]

Molecular weight: Translated: 45334; Mature: 45203

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSMPDMMAFAPVRIDPARLQAMMEAVSAFGAGPEGALTRLTLSPEDGQARDWLAAWFSA
CCCCCCHHHCCCCEECHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHH
HGFTPRVDAIGNQFGCLELAGPSAPTVMVGSHLDSQPNGGRFDGTLGVLAACEAILSVRA
CCCCCCHHHHCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ALEAAGRMSACNFTVANWTNEEGARFQPSLLGSSVFTGAAGLDWALARSDGDGVTVGEAL
HHHHHCCCCCCEEEEECCCCCCCCEECHHHHCCHHHCCCCCCCEEEECCCCCCCCHHHHH
SRIGYAGSDAVPVPDAFIELHIEGGPILEREGLRFGAFTRYWGATKYRLAFLGRQAHTGP
HHCCCCCCCCCCCCCEEEEEEECCCCEECCCCCEECCHHHHHCCCEEEEEEECCCCCCCC
TPMAERRDALLGAAYLIADLKAMTADYGLDLHTSVGRLEVRPNSPNTVPSEAVLFIELRS
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEECCCCCCCCCCCEEEEEEECC
GSPAILEEAELRLKAAIDLAAARAEVGHEVRAIDRRAAGPMAPGLVRLAERAGTANGTTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCE
RHLDTIGGHDAVSLSAVCPSVVLAVPCRGGVMHHPTEFTSPEDQAFGTQVLADMLMTLAT
EEECCCCCCCCEEHHHHHCHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
EGMAALETAGGDR
CCHHHHHHCCCCC
>Mature Secondary Structure 
TSMPDMMAFAPVRIDPARLQAMMEAVSAFGAGPEGALTRLTLSPEDGQARDWLAAWFSA
CCCCCHHHCCCCEECHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHH
HGFTPRVDAIGNQFGCLELAGPSAPTVMVGSHLDSQPNGGRFDGTLGVLAACEAILSVRA
CCCCCCHHHHCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ALEAAGRMSACNFTVANWTNEEGARFQPSLLGSSVFTGAAGLDWALARSDGDGVTVGEAL
HHHHHCCCCCCEEEEECCCCCCCCEECHHHHCCHHHCCCCCCCEEEECCCCCCCCHHHHH
SRIGYAGSDAVPVPDAFIELHIEGGPILEREGLRFGAFTRYWGATKYRLAFLGRQAHTGP
HHCCCCCCCCCCCCCEEEEEEECCCCEECCCCCEECCHHHHHCCCEEEEEEECCCCCCCC
TPMAERRDALLGAAYLIADLKAMTADYGLDLHTSVGRLEVRPNSPNTVPSEAVLFIELRS
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEECCCCCCCCCCCEEEEEEECC
GSPAILEEAELRLKAAIDLAAARAEVGHEVRAIDRRAAGPMAPGLVRLAERAGTANGTTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCE
RHLDTIGGHDAVSLSAVCPSVVLAVPCRGGVMHHPTEFTSPEDQAFGTQVLADMLMTLAT
EEECCCCCCCCEEHHHHHCHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
EGMAALETAGGDR
CCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA