| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is yhbW [H]
Identifier: 218531887
GI number: 218531887
Start: 4168707
End: 4169738
Strand: Reverse
Name: yhbW [H]
Synonym: Mchl_3964
Alternate gene names: 218531887
Gene position: 4169738-4168707 (Counterclockwise)
Preceding gene: 218531889
Following gene: 218531875
Centisome position: 72.17
GC content: 72.77
Gene sequence:
>1032_bases ATGTCTTCCTCTCTGCCTCCCCTCTCCGTCCTCGATCTCGCCTTCATCCCGGAGGGCGCCACGCCGCGGCAGGCGCTCGC CAACAGCGTCAGCCTGGCGCGGCACGCGGAGGAACTCGGCTACCGCCGCTTCTGGCTCGCCGAGCACCACAACATGGTCG GCATCGCCAGCGCCGCCACGGCGGTGGTGATCGGCCATGTGGCGGCGGGCACGGATCGCATCCGGGTCGGCGCGGGCGGG ATCATGCTGCCCAACCACGCGCCGCTGGTGATCGCCGAGCAGTTCGGCACGCTGGAATCGCTGTATCCGGGCCGGATCGA TCTCGGGCTCGGCCGGGCGCCGGGCACGGATGGGCTGACGCTGCGGGCGCTGCGCCGCGACTACGAGTCGGCGGAGCGCT TTCCCCAGGACGTGCTCGAATTGCAGGCTCTGTTCGGCCCGGTGCGGGAGGGGCAGTCGGTTCAGGCAGTGCCCGGCACT GGCCTCAAGGTGCCGCTGTGGATCCTCGGCTCGAGCCTGTTCGGGGCGGAACTCGCCGGCATGCTCGGCCTGCCCTACGC CTTCGCCTCGCATTTCGCGCCCGATGCGCTGCTGCCGGCGCTCGCGGCCTACCGCGCCCGCTTCCAGCCGTCCGAGCAGT TGCAGCGGCCCTACGCCATGGTCGGCGTCAACGTCGTCGCGGCGGAGACCGATGCGGAGGCGCAGCGCCTGTTCACCACG GTGCAGCAGCAATTCACCCGGCTGGTGCGCGGCACCCGCGGCCTCCTGCCCCCGCCGATCGACGACATCGAGGCGTATTG GCGCCCGGCGGAGAAGGCGCAGGCCTCGCGGATGCTGGCGCGCGCGCTGGTGGGCTCGCGCGAGACCGTCCGCGCCGGGC TGGAGGCGCTGGTGGCCGAGACCGGCGCCGACGAGGTGATGGTGGCCTCGGCCATCTACGACCACGACGCGCGGCTCGCC TCCTACGCGATCCTCGCCGAGGCGCATGGCGCTCTGGCAGCGCAGGCCCTGCCCGCGCGCTCAGCGGCCTGA
Upstream 100 bases:
>100_bases GTTCCTTGCGCCGGGGCGTCCTGCGCACGATCTGTCCGCTTCGAGGGGAAACAGTTTTTTCCGCCCCCACGGGCGTGAAG CGAAGGTGCGCGGCTTGCTG
Downstream 100 bases:
>100_bases ACGGGCTGCGGGCTTCCCGGCGGCGGGCGGCGGCGGAAGCTGCGAGATGTGGCGCAGGGCCGGTGGCGCCGTCGTCCCGG CCGCGGGCGCACCTGCCTGT
Product: monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MSSSLPPLSVLDLAFIPEGATPRQALANSVSLARHAEELGYRRFWLAEHHNMVGIASAATAVVIGHVAAGTDRIRVGAGG IMLPNHAPLVIAEQFGTLESLYPGRIDLGLGRAPGTDGLTLRALRRDYESAERFPQDVLELQALFGPVREGQSVQAVPGT GLKVPLWILGSSLFGAELAGMLGLPYAFASHFAPDALLPALAAYRARFQPSEQLQRPYAMVGVNVVAAETDAEAQRLFTT VQQQFTRLVRGTRGLLPPPIDDIEAYWRPAEKAQASRMLARALVGSRETVRAGLEALVAETGADEVMVASAIYDHDARLA SYAILAEAHGALAAQALPARSAA
Sequences:
>Translated_343_residues MSSSLPPLSVLDLAFIPEGATPRQALANSVSLARHAEELGYRRFWLAEHHNMVGIASAATAVVIGHVAAGTDRIRVGAGG IMLPNHAPLVIAEQFGTLESLYPGRIDLGLGRAPGTDGLTLRALRRDYESAERFPQDVLELQALFGPVREGQSVQAVPGT GLKVPLWILGSSLFGAELAGMLGLPYAFASHFAPDALLPALAAYRARFQPSEQLQRPYAMVGVNVVAAETDAEAQRLFTT VQQQFTRLVRGTRGLLPPPIDDIEAYWRPAEKAQASRMLARALVGSRETVRAGLEALVAETGADEVMVASAIYDHDARLA SYAILAEAHGALAAQALPARSAA >Mature_342_residues SSSLPPLSVLDLAFIPEGATPRQALANSVSLARHAEELGYRRFWLAEHHNMVGIASAATAVVIGHVAAGTDRIRVGAGGI MLPNHAPLVIAEQFGTLESLYPGRIDLGLGRAPGTDGLTLRALRRDYESAERFPQDVLELQALFGPVREGQSVQAVPGTG LKVPLWILGSSLFGAELAGMLGLPYAFASHFAPDALLPALAAYRARFQPSEQLQRPYAMVGVNVVAAETDAEAQRLFTTV QQQFTRLVRGTRGLLPPPIDDIEAYWRPAEKAQASRMLARALVGSRETVRAGLEALVAETGADEVMVASAIYDHDARLAS YAILAEAHGALAAQALPARSAA
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]
Homologues:
Organism=Escherichia coli, GI1789551, Length=325, Percent_Identity=54.1538461538462, Blast_Score=370, Evalue=1e-104,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR019949 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 36468; Mature: 36337
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSLPPLSVLDLAFIPEGATPRQALANSVSLARHAEELGYRRFWLAEHHNMVGIASAAT CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEHHHCCCEEEHHHHHH AVVIGHVAAGTDRIRVGAGGIMLPNHAPLVIAEQFGTLESLYPGRIDLGLGRAPGTDGLT HHHHHHHHCCCCEEEECCCCEECCCCCCEEEEHHHCCHHHCCCCCEEECCCCCCCCCCHH LRALRRDYESAERFPQDVLELQALFGPVREGQSVQAVPGTGLKVPLWILGSSLFGAELAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEHHHHHCCHHHHHHHHH MLGLPYAFASHFAPDALLPALAAYRARFQPSEQLQRPYAMVGVNVVAAETDAEAQRLFTT HHCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHCCHHHHCCEEEEECCCHHHHHHHHH VQQQFTRLVRGTRGLLPPPIDDIEAYWRPAEKAQASRMLARALVGSRETVRAGLEALVAE HHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH TGADEVMVASAIYDHDARLASYAILAEAHGALAAQALPARSAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SSSLPPLSVLDLAFIPEGATPRQALANSVSLARHAEELGYRRFWLAEHHNMVGIASAAT CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEHHHCCCEEEHHHHHH AVVIGHVAAGTDRIRVGAGGIMLPNHAPLVIAEQFGTLESLYPGRIDLGLGRAPGTDGLT HHHHHHHHCCCCEEEECCCCEECCCCCCEEEEHHHCCHHHCCCCCEEECCCCCCCCCCHH LRALRRDYESAERFPQDVLELQALFGPVREGQSVQAVPGTGLKVPLWILGSSLFGAELAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEHHHHHCCHHHHHHHHH MLGLPYAFASHFAPDALLPALAAYRARFQPSEQLQRPYAMVGVNVVAAETDAEAQRLFTT HHCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHCCHHHHCCEEEEECCCHHHHHHHHH VQQQFTRLVRGTRGLLPPPIDDIEAYWRPAEKAQASRMLARALVGSRETVRAGLEALVAE HHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH TGADEVMVASAIYDHDARLASYAILAEAHGALAAQALPARSAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]