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The map label for this gene is yxaC [H]

Identifier: 218531860

GI number: 218531860

Start: 4132567

End: 4133283

Strand: Reverse

Name: yxaC [H]

Synonym: Mchl_3937

Alternate gene names: 218531860

Gene position: 4133283-4132567 (Counterclockwise)

Preceding gene: 218531861

Following gene: 218531859

Centisome position: 71.54

GC content: 71.55

Gene sequence:

>717_bases
ATGACCGGCGAGTTCGCGCTCTGGGTCTATCTCAGCCACACGCCGCTGCTGTGGCTCACCGTGACGCTGCTGGCCTACGC
GGTGGCCGACCGGCTGTTTCAGGCGGCCGGGCGCCACCCGATGGCCAACCCGGTGATCCACGCGATCTGGATGATCGGCC
TCGTGCTGACGCTGACCGGCACGCCCTACCGCGCCTATTTCGAGGGCGCGCAGTTCGTGCACTTCCTGCTCGGCCCGGCC
ACGGTGGCGCTCGCCGTGCCGCTCTACGAGCGGCGGGCGACGGTGATGCGCGCGCTCCTGCCGATGCTCGCTGCCCTTCT
GGTGGGCTGCGTCACGGCGATGACCTCGGCGCTGGTCTTCGCCAAGCTCGTCGGCATCCCCTACGACGTGCGCCTCGCCA
TGGCCCCGAAATCCGTGACCACGGGCGTGGCGATGGGCATCGTCGAGGCGCTCGGCGGCGACCCGACTCTGGCCGCCGTG
CTGGTGATGCTGACCGGCATGGCCGGCGCGGTGATCGTCACGCCGCTGATGCGGACCCTGCGCATCGAGGACATGCGCGC
CCGCGGCTTCGCGGCGGGGCTCGCCGCCCACGGGCTCGGCACCGCCCGCGCCTTCCAGGTCAGCGAGGTCGCCGGCACCT
TCGCCGGCATCGCCATGGGGCTCAACGCGTTCCTGACGGCGGTTCTCGTGCCGGTGGCGGTGAGTTTCCTGCGCTGA

Upstream 100 bases:

>100_bases
ACGGGGTGGCGCTCGCCATCGTGCTCACCCTCTCCGTGACGCTCACCCTGGCGGCGACGGTGCTCACCTTCGTCGCGGTC
TCCAAGCTTCTGGACCGCCG

Downstream 100 bases:

>100_bases
ACCTCCCGCATTGCGCTGCGGCGCAGCACGCCGTAAACCCCACCGCAATCGCTCGGACCCGGTGCAAGCCCGGGTGGCTC
TTCCGGCCGCCGATCCGCCG

Product: LrgB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MTGEFALWVYLSHTPLLWLTVTLLAYAVADRLFQAAGRHPMANPVIHAIWMIGLVLTLTGTPYRAYFEGAQFVHFLLGPA
TVALAVPLYERRATVMRALLPMLAALLVGCVTAMTSALVFAKLVGIPYDVRLAMAPKSVTTGVAMGIVEALGGDPTLAAV
LVMLTGMAGAVIVTPLMRTLRIEDMRARGFAAGLAAHGLGTARAFQVSEVAGTFAGIAMGLNAFLTAVLVPVAVSFLR

Sequences:

>Translated_238_residues
MTGEFALWVYLSHTPLLWLTVTLLAYAVADRLFQAAGRHPMANPVIHAIWMIGLVLTLTGTPYRAYFEGAQFVHFLLGPA
TVALAVPLYERRATVMRALLPMLAALLVGCVTAMTSALVFAKLVGIPYDVRLAMAPKSVTTGVAMGIVEALGGDPTLAAV
LVMLTGMAGAVIVTPLMRTLRIEDMRARGFAAGLAAHGLGTARAFQVSEVAGTFAGIAMGLNAFLTAVLVPVAVSFLR
>Mature_237_residues
TGEFALWVYLSHTPLLWLTVTLLAYAVADRLFQAAGRHPMANPVIHAIWMIGLVLTLTGTPYRAYFEGAQFVHFLLGPAT
VALAVPLYERRATVMRALLPMLAALLVGCVTAMTSALVFAKLVGIPYDVRLAMAPKSVTTGVAMGIVEALGGDPTLAAVL
VMLTGMAGAVIVTPLMRTLRIEDMRARGFAAGLAAHGLGTARAFQVSEVAGTFAGIAMGLNAFLTAVLVPVAVSFLR

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=213, Percent_Identity=36.150234741784, Blast_Score=124, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 25081; Mature: 24950

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGEFALWVYLSHTPLLWLTVTLLAYAVADRLFQAAGRHPMANPVIHAIWMIGLVLTLTG
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
TPYRAYFEGAQFVHFLLGPATVALAVPLYERRATVMRALLPMLAALLVGCVTAMTSALVF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKLVGIPYDVRLAMAPKSVTTGVAMGIVEALGGDPTLAAVLVMLTGMAGAVIVTPLMRTL
HHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
RIEDMRARGFAAGLAAHGLGTARAFQVSEVAGTFAGIAMGLNAFLTAVLVPVAVSFLR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TGEFALWVYLSHTPLLWLTVTLLAYAVADRLFQAAGRHPMANPVIHAIWMIGLVLTLTG
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
TPYRAYFEGAQFVHFLLGPATVALAVPLYERRATVMRALLPMLAALLVGCVTAMTSALVF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKLVGIPYDVRLAMAPKSVTTGVAMGIVEALGGDPTLAAVLVMLTGMAGAVIVTPLMRTL
HHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
RIEDMRARGFAAGLAAHGLGTARAFQVSEVAGTFAGIAMGLNAFLTAVLVPVAVSFLR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377; 10568751 [H]