| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is 218531784
Identifier: 218531784
GI number: 218531784
Start: 4065869
End: 4067128
Strand: Reverse
Name: 218531784
Synonym: Mchl_3860
Alternate gene names: NA
Gene position: 4067128-4065869 (Counterclockwise)
Preceding gene: 218531785
Following gene: 218531783
Centisome position: 70.39
GC content: 66.03
Gene sequence:
>1260_bases GTGCCGAACAACTTCCTCACCGCGAACGTGATCGCCAAGGCGGCGGTCAAGATCCTCGACAACGAACTCGTGGCGGCCTC CAAGGTCCACCGCGGCTACGAGGACGAGTTCTCGTCCACCGTGAACGGCTACCAGAAAGGTGCCTCTGTCACGATTAAGC GGCCCCCGCAGTTCCAGGTCCGCGACGGTGCCACCGCGCAGCCACAGGACATCACCGAGGGCACGACCTCCGTCACCGTC GACAAGATGAAGGGCATCGATCTCCGGATCAGCTCGACCGACCGCACCCTGTCGATCGGCGAACTGTCCGAGCGTGTCAT CAAGCCGGCCATGGTCTCGCTCGCGAACCAGGTCGATCAGGACGTCATGAGCCTTTACTCGTCGATCCCGAATTGGGTCG GCACGCCGGGCACTGTCCTGTCGAGCTATTCGGGCTTCCTGCGCGGCACCACCCGCATGAACAACGGCTCGGTGCCGAAG GACAACCGCTTCTGCATGCTGTCGCCGGACGACGAGGCGGGTCTGGCTGATTCCCAGACCAAGTTCCTCAACGACAAGCT CGTCGGCGAGGCCTACCGCGACGGCGCCGTCGGCCGCATCGCGCAGGTCGATACCTACATGAGCCAGAACGTGCCCGTGC ACGTGACCGGCTCGCGCACCAACGGCACGGTGAACGGCGCTGGTCAGAACGTCACCTATACGCAGGTTCTCTCGAACGGC GTCGCGGTGAAGGACTTCGGCGGGCAGCTGCTCAACGTCTCCGGCCTCGGCAACGGCGGCGTGGTCGCGAAGGGTGACGT GTTCACCATCGCGGGCGTGTTCGCGGTCAACCACGTGACCAAGCAGGTGCTGCCCTACCTCCGGCAGTTCACCGTCCTGG CCGCGGCGGTCGCCGATGGCACCGGCAACGCCACCCTGCAAATCAGCCCGGCGATCATCGCCCCGGCCGCCTTCCCGAAC GGTGCCTTCACCGCCGTCTCGGCGGCTCCGGCTGCGGGTGCCGTGGTGGCCTGGATGGGCGCGGCCAACACGCCGTTCAC CCAGAACATCATGGCCCACAAGTCGGCGTTCGCGCTGACCTGCGTGCCGCTGGTGAAGCCCGATGGCGCGGTGTCCTGCG AGCGCGAGTCCTACAAGGGCCTCTCCGTCCGCCTGATCCCGTACTACGACGGCACCAACGACGTCTCGAACTGGCGTTTG GACATCCTGTACGGCGTGAAGGCCGTCGATCCGCGCCTCGGTGTCCGCCTCAACGGCTGA
Upstream 100 bases:
>100_bases GCCTGCCAAGCAGGTCTCCGGTGCCGCTGCGCCCTCGTCTCCCGACGCGGAGATCGATGCGTGGCTCGCCAAAACCTACG GCCGATAAGGATCCACGACA
Downstream 100 bases:
>100_bases CGCTCTCCACCACCGCTAAGACGAAAGGGCCCCCTCGTGGGGCCCTTCGTCGTTTTGGGGCCATGCGCGCCCCGTCACTC CCGACGAGGCGTCCATGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MPNNFLTANVIAKAAVKILDNELVAASKVHRGYEDEFSSTVNGYQKGASVTIKRPPQFQVRDGATAQPQDITEGTTSVTV DKMKGIDLRISSTDRTLSIGELSERVIKPAMVSLANQVDQDVMSLYSSIPNWVGTPGTVLSSYSGFLRGTTRMNNGSVPK DNRFCMLSPDDEAGLADSQTKFLNDKLVGEAYRDGAVGRIAQVDTYMSQNVPVHVTGSRTNGTVNGAGQNVTYTQVLSNG VAVKDFGGQLLNVSGLGNGGVVAKGDVFTIAGVFAVNHVTKQVLPYLRQFTVLAAAVADGTGNATLQISPAIIAPAAFPN GAFTAVSAAPAAGAVVAWMGAANTPFTQNIMAHKSAFALTCVPLVKPDGAVSCERESYKGLSVRLIPYYDGTNDVSNWRL DILYGVKAVDPRLGVRLNG
Sequences:
>Translated_419_residues MPNNFLTANVIAKAAVKILDNELVAASKVHRGYEDEFSSTVNGYQKGASVTIKRPPQFQVRDGATAQPQDITEGTTSVTV DKMKGIDLRISSTDRTLSIGELSERVIKPAMVSLANQVDQDVMSLYSSIPNWVGTPGTVLSSYSGFLRGTTRMNNGSVPK DNRFCMLSPDDEAGLADSQTKFLNDKLVGEAYRDGAVGRIAQVDTYMSQNVPVHVTGSRTNGTVNGAGQNVTYTQVLSNG VAVKDFGGQLLNVSGLGNGGVVAKGDVFTIAGVFAVNHVTKQVLPYLRQFTVLAAAVADGTGNATLQISPAIIAPAAFPN GAFTAVSAAPAAGAVVAWMGAANTPFTQNIMAHKSAFALTCVPLVKPDGAVSCERESYKGLSVRLIPYYDGTNDVSNWRL DILYGVKAVDPRLGVRLNG >Mature_418_residues PNNFLTANVIAKAAVKILDNELVAASKVHRGYEDEFSSTVNGYQKGASVTIKRPPQFQVRDGATAQPQDITEGTTSVTVD KMKGIDLRISSTDRTLSIGELSERVIKPAMVSLANQVDQDVMSLYSSIPNWVGTPGTVLSSYSGFLRGTTRMNNGSVPKD NRFCMLSPDDEAGLADSQTKFLNDKLVGEAYRDGAVGRIAQVDTYMSQNVPVHVTGSRTNGTVNGAGQNVTYTQVLSNGV AVKDFGGQLLNVSGLGNGGVVAKGDVFTIAGVFAVNHVTKQVLPYLRQFTVLAAAVADGTGNATLQISPAIIAPAAFPNG AFTAVSAAPAAGAVVAWMGAANTPFTQNIMAHKSAFALTCVPLVKPDGAVSCERESYKGLSVRLIPYYDGTNDVSNWRLD ILYGVKAVDPRLGVRLNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44198; Mature: 44066
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNNFLTANVIAKAAVKILDNELVAASKVHRGYEDEFSSTVNGYQKGASVTIKRPPQFQV CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCEEE RDGATAQPQDITEGTTSVTVDKMKGIDLRISSTDRTLSIGELSERVIKPAMVSLANQVDQ CCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHH DVMSLYSSIPNWVGTPGTVLSSYSGFLRGTTRMNNGSVPKDNRFCMLSPDDEAGLADSQT HHHHHHHHCCCCCCCCCHHHHHCCHHHEECEECCCCCCCCCCCEEEECCCCCCCCCCCHH KFLNDKLVGEAYRDGAVGRIAQVDTYMSQNVPVHVTGSRTNGTVNGAGQNVTYTQVLSNG HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCEECCCCCCEEHHHHHHCC VAVKDFGGQLLNVSGLGNGGVVAKGDVFTIAGVFAVNHVTKQVLPYLRQFTVLAAAVADG CEEEECCCCEEEEEECCCCCEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TGNATLQISPAIIAPAAFPNGAFTAVSAAPAAGAVVAWMGAANTPFTQNIMAHKSAFALT CCCEEEEECCCEEECCCCCCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEE CVPLVKPDGAVSCERESYKGLSVRLIPYYDGTNDVSNWRLDILYGVKAVDPRLGVRLNG EEEEECCCCCCEECHHCCCCCEEEEEEEECCCCCCCCEEEEEEECCEEECCCCCEEECC >Mature Secondary Structure PNNFLTANVIAKAAVKILDNELVAASKVHRGYEDEFSSTVNGYQKGASVTIKRPPQFQV CCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCEEE RDGATAQPQDITEGTTSVTVDKMKGIDLRISSTDRTLSIGELSERVIKPAMVSLANQVDQ CCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHH DVMSLYSSIPNWVGTPGTVLSSYSGFLRGTTRMNNGSVPKDNRFCMLSPDDEAGLADSQT HHHHHHHHCCCCCCCCCHHHHHCCHHHEECEECCCCCCCCCCCEEEECCCCCCCCCCCHH KFLNDKLVGEAYRDGAVGRIAQVDTYMSQNVPVHVTGSRTNGTVNGAGQNVTYTQVLSNG HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCEECCCCCCEEHHHHHHCC VAVKDFGGQLLNVSGLGNGGVVAKGDVFTIAGVFAVNHVTKQVLPYLRQFTVLAAAVADG CEEEECCCCEEEEEECCCCCEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TGNATLQISPAIIAPAAFPNGAFTAVSAAPAAGAVVAWMGAANTPFTQNIMAHKSAFALT CCCEEEEECCCEEECCCCCCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEE CVPLVKPDGAVSCERESYKGLSVRLIPYYDGTNDVSNWRLDILYGVKAVDPRLGVRLNG EEEEECCCCCCEECHHCCCCCEEEEEEEECCCCCCCCEEEEEEECCEEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA