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The map label for this gene is ctrA [H]

Identifier: 218531701

GI number: 218531701

Start: 3984072

End: 3985238

Strand: Reverse

Name: ctrA [H]

Synonym: Mchl_3770

Alternate gene names: 218531701

Gene position: 3985238-3984072 (Counterclockwise)

Preceding gene: 218531706

Following gene: 218531700

Centisome position: 68.97

GC content: 70.01

Gene sequence:

>1167_bases
ATGCGCGCTCTAGCCATTGCTCTCCTCACCGCCACGGCGGTGTCGGGGTGCTCCATCCTGCCGGCCGCGGGGCCGACAAC
CTCGGCGATCGAGGGCGGCGCCGACGTCGCCACCGCCGAAGGCCTGTTTGCCCGCTACGAAATCATCGACATCACCCCTG
CCCTCGTCGAGGCCCTGCGCACCCGCCCCCTCGACAGCCTCCTCGTCACCTTCGGTGACAGCCGCCCGGCGCTCGAACCG
GTGATCGGCGTCGGCGACTACGTGTCGGTGCAGGTCTGGGAAGCCGGTTCCGGTGGCCTGTTCTCCGGCCCGCTCGTCTC
CGACCGCTTCTCGGCCGGCTCGAAGTCCGCGATGATCCCCGAGCAGGTGGTCGGGCCTGATGGCGGCATCACCGTCCCCT
ATGCCGGCCGCATCAAGGTCGTCGGACGCCGCACTCAGGAAGTCCAGGCGCTGATCGAGACCGAACTCGCCGGCAAGGCA
ATCCAGCCGCAGGTGCTCGTCTCCGTCACCAAACCGATCTCACAATCGGCCACCGTCACCGGCGAAGGCGCCATGGGCAT
GCGCGTGCCGCTGTCGGGCCGCGGCGACCGCCTGCTCGACGTCATCGCCCAGGCCGGCGGCGTGCGCACCCCGGTGGCCG
AGACCTTCGTGCGGCTGTCGCGCGGCAACCGCACCGTCACCGTGCCGATGAGCACGGTGGTCGCCAACCCGCGCGAGAAC
ATCTTCGTGCGTCCTGACGACACGCTGACCCTGGTGCGCGATCCGCAGACCTTCCTGGCCGTGGGTGCGCTCGGCAACAC
CACCGAGGTGCCGTTCACGGCGGACGGGCTGACGCTGTCGCAGGCGCTGGCGCGGGCCTCTGGCCTGCGCGAGTTCCAGG
CCGATCCGGCGGGCGTGTTCATCTTCCGCTACGAACCGGCGGCGGTGGTGCGGCGGCTGCGTCCGAACTCGCCGCTGCTG
TCCTCAGGGCAGGTGCCGGTGGTGTACCGGGTGAACCTGCGCGATGCGCAAGGCATGTTCCTGACCCAGAGCTTCCGCAT
GCGGAACCGCGACCTCGTCTACGTGTCGAGTTCGCCGTTCGCGGAGCTCGGTAAGGTGCTGGGCGTGTTCTCGACCGTGG
CCTCGCCCATCGCGGCGGGCGCCTCGATCTACACCGTCACGCGGTGA

Upstream 100 bases:

>100_bases
CCGGTTCGGTGCTCCCCGACCCGGTGTGGCGGCCTCGCCACGGACAGCCTGGCCTGTTTCGGCTACCCACCCCGATGAGA
AAAACCGTCAGGCGGCCTGA

Downstream 100 bases:

>100_bases
TCCAGGACCCGGTGGTGTCCGGCGCGGTGACGGGTGGAGCAATCCTCGCGGTCGCGGGATTGGCCCGCGAGGCCCGCATC
GCCGCCGGGCCGGGCGTCGA

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MRALAIALLTATAVSGCSILPAAGPTTSAIEGGADVATAEGLFARYEIIDITPALVEALRTRPLDSLLVTFGDSRPALEP
VIGVGDYVSVQVWEAGSGGLFSGPLVSDRFSAGSKSAMIPEQVVGPDGGITVPYAGRIKVVGRRTQEVQALIETELAGKA
IQPQVLVSVTKPISQSATVTGEGAMGMRVPLSGRGDRLLDVIAQAGGVRTPVAETFVRLSRGNRTVTVPMSTVVANPREN
IFVRPDDTLTLVRDPQTFLAVGALGNTTEVPFTADGLTLSQALARASGLREFQADPAGVFIFRYEPAAVVRRLRPNSPLL
SSGQVPVVYRVNLRDAQGMFLTQSFRMRNRDLVYVSSSPFAELGKVLGVFSTVASPIAAGASIYTVTR

Sequences:

>Translated_388_residues
MRALAIALLTATAVSGCSILPAAGPTTSAIEGGADVATAEGLFARYEIIDITPALVEALRTRPLDSLLVTFGDSRPALEP
VIGVGDYVSVQVWEAGSGGLFSGPLVSDRFSAGSKSAMIPEQVVGPDGGITVPYAGRIKVVGRRTQEVQALIETELAGKA
IQPQVLVSVTKPISQSATVTGEGAMGMRVPLSGRGDRLLDVIAQAGGVRTPVAETFVRLSRGNRTVTVPMSTVVANPREN
IFVRPDDTLTLVRDPQTFLAVGALGNTTEVPFTADGLTLSQALARASGLREFQADPAGVFIFRYEPAAVVRRLRPNSPLL
SSGQVPVVYRVNLRDAQGMFLTQSFRMRNRDLVYVSSSPFAELGKVLGVFSTVASPIAAGASIYTVTR
>Mature_388_residues
MRALAIALLTATAVSGCSILPAAGPTTSAIEGGADVATAEGLFARYEIIDITPALVEALRTRPLDSLLVTFGDSRPALEP
VIGVGDYVSVQVWEAGSGGLFSGPLVSDRFSAGSKSAMIPEQVVGPDGGITVPYAGRIKVVGRRTQEVQALIETELAGKA
IQPQVLVSVTKPISQSATVTGEGAMGMRVPLSGRGDRLLDVIAQAGGVRTPVAETFVRLSRGNRTVTVPMSTVVANPREN
IFVRPDDTLTLVRDPQTFLAVGALGNTTEVPFTADGLTLSQALARASGLREFQADPAGVFIFRYEPAAVVRRLRPNSPLL
SSGQVPVVYRVNLRDAQGMFLTQSFRMRNRDLVYVSSSPFAELGKVLGVFSTVASPIAAGASIYTVTR

Specific function: Involved in transport of capsular polysaccharides to the cell surface. May function as a membrane anchor for capsular polysaccharides. Possible porin properties [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=377, Percent_Identity=27.0557029177719, Blast_Score=125, Evalue=7e-30,
Organism=Escherichia coli, GI1788376, Length=385, Percent_Identity=24.9350649350649, Blast_Score=109, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715 [H]

Pfam domain/function: PF02563 Poly_export [H]

EC number: NA

Molecular weight: Translated: 40767; Mature: 40767

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALAIALLTATAVSGCSILPAAGPTTSAIEGGADVATAEGLFARYEIIDITPALVEALR
CCHHHHHHHHHHHHCCCEEECCCCCCCHHCCCCCCEEHHCCCEEEEEEEECCHHHHHHHH
TRPLDSLLVTFGDSRPALEPVIGVGDYVSVQVWEAGSGGLFSGPLVSDRFSAGSKSAMIP
HCCCHHEEEEECCCCCCCCHHCCCCCEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCC
EQVVGPDGGITVPYAGRIKVVGRRTQEVQALIETELAGKAIQPQVLVSVTKPISQSATVT
HHHCCCCCCEECCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEE
GEGAMGMRVPLSGRGDRLLDVIAQAGGVRTPVAETFVRLSRGNRTVTVPMSTVVANPREN
CCCCCEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEHHHEECCCCCC
IFVRPDDTLTLVRDPQTFLAVGALGNTTEVPFTADGLTLSQALARASGLREFQADPAGVF
EEECCCCCEEEEECCCCEEEEECCCCCCCCCEEECCCHHHHHHHHHHCCHHHCCCCCEEE
IFRYEPAAVVRRLRPNSPLLSSGQVPVVYRVNLRDAQGMFLTQSFRMRNRDLVYVSSSPF
EEEECHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEHHHHCCCCCEEEECCCCH
AELGKVLGVFSTVASPIAAGASIYTVTR
HHHHHHHHHHHHHHHHHHCCCEEEEEEC
>Mature Secondary Structure
MRALAIALLTATAVSGCSILPAAGPTTSAIEGGADVATAEGLFARYEIIDITPALVEALR
CCHHHHHHHHHHHHCCCEEECCCCCCCHHCCCCCCEEHHCCCEEEEEEEECCHHHHHHHH
TRPLDSLLVTFGDSRPALEPVIGVGDYVSVQVWEAGSGGLFSGPLVSDRFSAGSKSAMIP
HCCCHHEEEEECCCCCCCCHHCCCCCEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCC
EQVVGPDGGITVPYAGRIKVVGRRTQEVQALIETELAGKAIQPQVLVSVTKPISQSATVT
HHHCCCCCCEECCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEE
GEGAMGMRVPLSGRGDRLLDVIAQAGGVRTPVAETFVRLSRGNRTVTVPMSTVVANPREN
CCCCCEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEHHHEECCCCCC
IFVRPDDTLTLVRDPQTFLAVGALGNTTEVPFTADGLTLSQALARASGLREFQADPAGVF
EEECCCCCEEEEECCCCEEEEECCCCCCCCCEEECCCHHHHHHHHHHCCHHHCCCCCEEE
IFRYEPAAVVRRLRPNSPLLSSGQVPVVYRVNLRDAQGMFLTQSFRMRNRDLVYVSSSPF
EEEECHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEHHHHCCCCCEEEECCCCH
AELGKVLGVFSTVASPIAAGASIYTVTR
HHHHHHHHHHHHHHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1659649; 1371768; 10710307 [H]