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The map label for this gene is ydhP [H]

Identifier: 218531643

GI number: 218531643

Start: 3914586

End: 3915761

Strand: Reverse

Name: ydhP [H]

Synonym: Mchl_3712

Alternate gene names: 218531643

Gene position: 3915761-3914586 (Counterclockwise)

Preceding gene: 218531654

Following gene: 218531634

Centisome position: 67.77

GC content: 72.11

Gene sequence:

>1176_bases
ATGGCATCCCTGCCGATCCTCGCGCTCGCCGTTGCCTCCTTCGGCATCGGCACCACCGAGTTCGTCATCATGGGCCTCCT
GCCGGAGATGGCGCGCGACTTCGACGTCACGATCCCGCAGGCGGGCCACCTCGTGTCCGGCTACGCGCTCGGTGTGGTGA
TCGGCGCGCCGCTCGTAGCGATGGCGACCGCGCACCTGCCGCGCAAAGCGGCCCTGCTCGCCCTGATGGCGGTGTTCACC
CTCGGCAACCTCGCCTGTGCCCTGGCGCCGAGCTACGCATGGCTGATGGCCGCGCGGGTCGCCACCGCCTTCGCCCACGG
CGCCTTCTTCGGCATCGGCGCCATCGTCGCGCGCAACCTCGTGCCGCGGGAGAAGCGCACGCAGGCCGTCTCGCTGATGT
TCGCCGGGCTGACGCTCGCCAACGTTCTCGGTGTGCCGCTCGGAACCGCGCTCGGACAGGCCTTCGGCTGGCGCTCGACC
TTCTGGGCGGTGGTCGGCATCGGGCTCGTGGCGGGGGCGGCGATCGCGCTCGCCCTGCCCGGCGGAATGCCCGGCACGCG
GGGCGGTCTCGGACGGGAATTCCGGGCGCTCGGGCGCTGGCCGGTGCTGCGGCCGATGCTGGTCTCGACCCTGTCCTCGG
TGAGCTTCTTCACCCTCTTCACCTACATCGCGCCGTTCCTGCTCACCGTGACACATCTGACGCCCGGCGGCGTGACGGGG
GCGCTGTTCGCGGCCGGTGTCGGCCTCACGATCGGCAATCTCGCCGGCGGCTGGCTCGCCGACCGCAGCCTGATGCGCAC
GGTGCTCGGCAGCTTTGCCGCGCTCATCGTGGTGCTCGTCGTGTTCCCGCTGGTCGCGCCCTTTACCTGGCCGGCGCTGG
CGGTTCTGGTGCTGTGGAGCGGGCTCGCCTTCGCCCTGGTCTCGCCGCTTCAGGTCTGGGTGCTGGAGGCGGCCAGCGAC
GCCCCGAACCTCGCCTCGACCCTGAACCAGGGGGCGTTCAATCTCGGCAACGCCCTCGGCGCCTGGCTCGGCGGCACGGC
GCTGACGCTGGGCGTGGGTTATGCGGAGTTGCCGGCCCTGGCGGCCGTCGTCTCCCTTCTGGGCCTCGGACTTGCCGCCA
CGGGGGCCGCGCGGTCCCTGTGGCCGTCCCTGGCGGCAAGCCAGGGACGGTCGTGA

Upstream 100 bases:

>100_bases
GGTCTGCCTCCCGGTCATGCGCCTGTCGCGTCCGCCCGAGATGACCATGTTGCGGCGCTCGTATTGCAGCGCAACACACG
CGCTGCCCGGAGCATTCTGC

Downstream 100 bases:

>100_bases
CTCAGGTCACATCGGCGGGGTGAGGCCGTCCTTGCCAACCGCGACGAGCTTGCCTTCGAGCTTGCCGCCGTCTTTGGCCG
CGACGACGAAGATCTTCGCA

Product: major facilitator superfamily MFS_1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MASLPILALAVASFGIGTTEFVIMGLLPEMARDFDVTIPQAGHLVSGYALGVVIGAPLVAMATAHLPRKAALLALMAVFT
LGNLACALAPSYAWLMAARVATAFAHGAFFGIGAIVARNLVPREKRTQAVSLMFAGLTLANVLGVPLGTALGQAFGWRST
FWAVVGIGLVAGAAIALALPGGMPGTRGGLGREFRALGRWPVLRPMLVSTLSSVSFFTLFTYIAPFLLTVTHLTPGGVTG
ALFAAGVGLTIGNLAGGWLADRSLMRTVLGSFAALIVVLVVFPLVAPFTWPALAVLVLWSGLAFALVSPLQVWVLEAASD
APNLASTLNQGAFNLGNALGAWLGGTALTLGVGYAELPALAAVVSLLGLGLAATGAARSLWPSLAASQGRS

Sequences:

>Translated_391_residues
MASLPILALAVASFGIGTTEFVIMGLLPEMARDFDVTIPQAGHLVSGYALGVVIGAPLVAMATAHLPRKAALLALMAVFT
LGNLACALAPSYAWLMAARVATAFAHGAFFGIGAIVARNLVPREKRTQAVSLMFAGLTLANVLGVPLGTALGQAFGWRST
FWAVVGIGLVAGAAIALALPGGMPGTRGGLGREFRALGRWPVLRPMLVSTLSSVSFFTLFTYIAPFLLTVTHLTPGGVTG
ALFAAGVGLTIGNLAGGWLADRSLMRTVLGSFAALIVVLVVFPLVAPFTWPALAVLVLWSGLAFALVSPLQVWVLEAASD
APNLASTLNQGAFNLGNALGAWLGGTALTLGVGYAELPALAAVVSLLGLGLAATGAARSLWPSLAASQGRS
>Mature_390_residues
ASLPILALAVASFGIGTTEFVIMGLLPEMARDFDVTIPQAGHLVSGYALGVVIGAPLVAMATAHLPRKAALLALMAVFTL
GNLACALAPSYAWLMAARVATAFAHGAFFGIGAIVARNLVPREKRTQAVSLMFAGLTLANVLGVPLGTALGQAFGWRSTF
WAVVGIGLVAGAAIALALPGGMPGTRGGLGREFRALGRWPVLRPMLVSTLSSVSFFTLFTYIAPFLLTVTHLTPGGVTGA
LFAAGVGLTIGNLAGGWLADRSLMRTVLGSFAALIVVLVVFPLVAPFTWPALAVLVLWSGLAFALVSPLQVWVLEAASDA
PNLASTLNQGAFNLGNALGAWLGGTALTLGVGYAELPALAAVVSLLGLGLAATGAARSLWPSLAASQGRS

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=377, Percent_Identity=46.9496021220159, Blast_Score=299, Evalue=2e-82,
Organism=Escherichia coli, GI1786595, Length=376, Percent_Identity=36.436170212766, Blast_Score=206, Evalue=3e-54,
Organism=Escherichia coli, GI1787808, Length=369, Percent_Identity=33.0623306233062, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI145693198, Length=332, Percent_Identity=28.3132530120482, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 39807; Mature: 39675

Theoretical pI: Translated: 11.23; Mature: 11.23

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ASLPILALAVASFGIGTTEFVIMGLLPEMARDFDVTIPQAGHLVSGYALGVVIGAPLVA
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
MATAHLPRKAALLALMAVFTLGNLACALAPSYAWLMAARVATAFAHGAFFGIGAIVARNL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VPREKRTQAVSLMFAGLTLANVLGVPLGTALGQAFGWRSTFWAVVGIGLVAGAAIALALP
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC
GGMPGTRGGLGREFRALGRWPVLRPMLVSTLSSVSFFTLFTYIAPFLLTVTHLTPGGVTG
CCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ALFAAGVGLTIGNLAGGWLADRSLMRTVLGSFAALIVVLVVFPLVAPFTWPALAVLVLWS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
GLAFALVSPLQVWVLEAASDAPNLASTLNQGAFNLGNALGAWLGGTALTLGVGYAELPAL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHCCHHHHHCCCHHHHHHH
AAVVSLLGLGLAATGAARSLWPSLAASQGRS
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]