| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is yieH [H]
Identifier: 218531548
GI number: 218531548
Start: 3807772
End: 3808458
Strand: Reverse
Name: yieH [H]
Synonym: Mchl_3616
Alternate gene names: 218531548
Gene position: 3808458-3807772 (Counterclockwise)
Preceding gene: 218531550
Following gene: 218531547
Centisome position: 65.91
GC content: 71.47
Gene sequence:
>687_bases ATGACGGACGCCTTCCCCGCCTCGCCTTCCCTCGCCCTCGTGATCTTCGACTGCGACGGCGTGCTGATCGACAGCGAGCC GATCAGCCTCGCGACCCTGACGCGCGGGCTCAACGGGATCGGGCTCGCGATCAGCGTCGACAGCGTGCGGGAGCGGTTTG CCGGCACCTCCATGACCTCGATCATGGAGCGCGTCGCCCGCGAGGATGGGGTCACGGCTCCGGACGGCTTCGTCGAGCGC GTGAAGGCGGAGACGCTCGCCGCCTTCGAGGCGGAGCTGGCCGCCATGGCCGGGATCGCCGAGGCACTGGGGCTCCTGAA CCTGCCGTTCTGCGTCGCCTCCAGCAGCGACCCCGTGCGGCTGCGCCGCTCGCTCTCGCTCACCGGACTGCTGCCGCTGT TCGAGGGGCGCGTCTTCTCCTCCGCGCAGGTGGCGCGCGGAAAGCCGTTCCCGGACCTGTTCCTGTTCGCGGCTGAACAG ATGGGCATCGCGCCGGAACAGTGCCTCGTGATCGAGGACAGCGTGCCGGGGGTGCAGGCCGCGCGGGCGGCCGGAATGCG GGTCGTCGGCTTCACCGGCGGCGGGCATTGGGGCCACGACCGGGCCGGACGGGATCTCCTCGATGCCGGGGCCGCCGCTA TCTTCTCGGCCCATGCCGATCTCGGGCGCATCGTCGCCGGGGCATGA
Upstream 100 bases:
>100_bases CGCGGGGCGCAGTTGGCGCCGGGAATGTGGTGCAACCCCGCTTCGAGCGATGGCCCGGCTGCGTTGCAGTGCTTCGATTG CCGTGCGAGACGAGCCGCCG
Downstream 100 bases:
>100_bases GGCCGGTTTCGGCCCGGGCTTTGCTAGATTTGGCGTGAGCCCTTCCCCGACAGACGGGACGCGCCGCGGATCGCTCGAAT CGCGGCGCGAACTTCCTCTG
Product: HAD-superfamily hydrolase, subfamily IA, variant 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTDAFPASPSLALVIFDCDGVLIDSEPISLATLTRGLNGIGLAISVDSVRERFAGTSMTSIMERVAREDGVTAPDGFVER VKAETLAAFEAELAAMAGIAEALGLLNLPFCVASSSDPVRLRRSLSLTGLLPLFEGRVFSSAQVARGKPFPDLFLFAAEQ MGIAPEQCLVIEDSVPGVQAARAAGMRVVGFTGGGHWGHDRAGRDLLDAGAAAIFSAHADLGRIVAGA
Sequences:
>Translated_228_residues MTDAFPASPSLALVIFDCDGVLIDSEPISLATLTRGLNGIGLAISVDSVRERFAGTSMTSIMERVAREDGVTAPDGFVER VKAETLAAFEAELAAMAGIAEALGLLNLPFCVASSSDPVRLRRSLSLTGLLPLFEGRVFSSAQVARGKPFPDLFLFAAEQ MGIAPEQCLVIEDSVPGVQAARAAGMRVVGFTGGGHWGHDRAGRDLLDAGAAAIFSAHADLGRIVAGA >Mature_227_residues TDAFPASPSLALVIFDCDGVLIDSEPISLATLTRGLNGIGLAISVDSVRERFAGTSMTSIMERVAREDGVTAPDGFVERV KAETLAAFEAELAAMAGIAEALGLLNLPFCVASSSDPVRLRRSLSLTGLLPLFEGRVFSSAQVARGKPFPDLFLFAAEQM GIAPEQCLVIEDSVPGVQAARAAGMRVVGFTGGGHWGHDRAGRDLLDAGAAAIFSAHADLGRIVAGA
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=184, Percent_Identity=33.695652173913, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1789046, Length=184, Percent_Identity=28.804347826087, Blast_Score=70, Evalue=9e-14, Organism=Escherichia coli, GI1788021, Length=180, Percent_Identity=29.4444444444444, Blast_Score=64, Evalue=6e-12, Organism=Escherichia coli, GI1789787, Length=210, Percent_Identity=28.5714285714286, Blast_Score=62, Evalue=4e-11, Organism=Drosophila melanogaster, GI116008157, Length=185, Percent_Identity=34.5945945945946, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI17137324, Length=186, Percent_Identity=32.7956989247312, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 23656; Mature: 23525
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAFPASPSLALVIFDCDGVLIDSEPISLATLTRGLNGIGLAISVDSVRERFAGTSMTS CCCCCCCCCCEEEEEEECCCEEECCCCCHHHHHHCCCCCEEEEEEHHHHHHHHCCCCHHH IMERVAREDGVTAPDGFVERVKAETLAAFEAELAAMAGIAEALGLLNLPFCVASSSDPVR HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHH LRRSLSLTGLLPLFEGRVFSSAQVARGKPFPDLFLFAAEQMGIAPEQCLVIEDSVPGVQA HHHHCCHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHH ARAAGMRVVGFTGGGHWGHDRAGRDLLDAGAAAIFSAHADLGRIVAGA HHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDAFPASPSLALVIFDCDGVLIDSEPISLATLTRGLNGIGLAISVDSVRERFAGTSMTS CCCCCCCCCEEEEEEECCCEEECCCCCHHHHHHCCCCCEEEEEEHHHHHHHHCCCCHHH IMERVAREDGVTAPDGFVERVKAETLAAFEAELAAMAGIAEALGLLNLPFCVASSSDPVR HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHH LRRSLSLTGLLPLFEGRVFSSAQVARGKPFPDLFLFAAEQMGIAPEQCLVIEDSVPGVQA HHHHCCHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHH ARAAGMRVVGFTGGGHWGHDRAGRDLLDAGAAAIFSAHADLGRIVAGA HHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]