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The map label for this gene is mmgC [H]

Identifier: 218531501

GI number: 218531501

Start: 3756164

End: 3757954

Strand: Reverse

Name: mmgC [H]

Synonym: Mchl_3569

Alternate gene names: 218531501

Gene position: 3757954-3756164 (Counterclockwise)

Preceding gene: 218531504

Following gene: 218531500

Centisome position: 65.04

GC content: 68.29

Gene sequence:

>1791_bases
ATGCCGAGCTACCGGGCCCCGGTCGAGGACACCCTGTTCCTCCTCAACGACGTTCTCGCGATCCACCGCTACGACAATCT
CCCCGGCTTCGCCGACGCCTCCGCCGATCTGGCCCAGGCGGTGCTGAGCGAGGGCGGCAGGCTCGCGGGGGAAGTGTTCG
CGCCGCTGAACCTCTCCGGCGACCGGGAGGGCTGCACCCGCCGGGAGGATGGCAGCGTCGTGACGCCGAAGGGCTTCAAG
GCGGCCTACGATGCCTACGCCGCCGGCGGCTGGATGGGCCTGTCGATCCCCGAGGAATTCGGCGGCCAGGGCCTGCCGCA
CGTGCTCAACACGGCGATGCAGGAATTCGTCTCCGGCGCCAACCTCGCCCTCAGCATGTATCCCGGCCTGACGCAGGGGG
CGATCGCCGCGCTGCTCGTCCACGGCTCGCCCGAGCAGAAGGCGACCTACCTGCCGAAGATGGTCGAGGGCGCCTGGACC
GGCACCATGAACCTCACCGAGCCGCATTGCGGCACGGATCTCGGCCTGCTGAAAACCAAGGCGGTTCCCAACGGCGACGG
CTCATACAGCCTCACCGGCACCAAGATCTTCATCTCGGCGGGCGAGCACGACCTGTCGGAGAATATCGTCCACCTCGTCA
TCGCCCGCATCGAGGGCGCGCCGTCGGGCACCAAGGGCATCTCGCTGTTCGTGGTGCCGAAGTTCCTCGTGAACGCGGAT
GGCTCCGTGGGCGAGCGCAACGCGGTGGCCTGCGGCTCGATCGAGCACAAGATGGGCATCCACGCCAACTCCACCTGCGT
GATGAACTACGACGGAGCGAAGGGCTGGCTCGTCGGCCAGGAGAATCGCGGTCTGGCCGCGATGTTCGTGATGATGAACG
AGGCCCGCCTCGCCGTCGGCGTCCAGGGGCTCGGCCAGTCCGAGGCCGCCTATCAGAACGCGGTCGCCTACGCGCAGGAG
CGTCTGCAGGGCCGCTCGCTCACCGGCGCGAAGGCGCCGGACAAGGCCGCCGACCCGATCATCGTTCACCCGGACGTGCG
CCGCACGCTGATGCAGATCCGCGCCTTCAACGAGGCCGCGCGCGCGCTCATGCTCTGGACCGCCCTCAACTCCGACATCG
CCCATCGCTCGCAGGATGCGGCCGAGCGGCAGACGGCCGAGGACATGCTCGGCCTGATGACCCCTGTGGTGAAGGGCGTG
CTGACCGACCGGGGCTTTGCCAACGCGGTCGAGGCGCAGCAGATGTTCGGCGGCCACGGCTATGTCGAGGAATGGGGCAT
GTCGCAGTTCGTGCGCGATGCCCGCATCGCCATGATCTACGAGGGCGCCAACGGCATCCAGGCGATGGACCTGATCGGCC
GCAAGCTGCCCAAGGATGGCGGCCGGGCGATGATGGCCTTCCTCACTGAGGTGCAGACCTTCATCAAGGACCACGGCGAG
GACGAGGGGATGAAGCCCTTCGTGGCGCCGCTCCAGCCGGCGCTGAACGATCTCCAGGCCGCGGTGATGTGGCTGATGCA
GAACGCCTTCTCGAAGCCCGACAACGCGGGCGCCGCCGCCACCGACCTGATGCACCTGCTGGGCCAGGTCGTGCTGGGCT
ACATGTGGGCCAAGATCGCGCGGGCAGCGCTCGCGAAGAAAGCCGAGGGCGCCGACGTCGAGCGGATGGATGCCAAGCTC
GTGCTCGGCCGTTTCTTCATGGAGCGGATGCTGCCGGAGACGAGCCTTCGCCTCGCGCGGATCAAGGCCGGCGCGGAGAC
GACCATGGCGCTGCCCGCCGAGGCGTTCTAA

Upstream 100 bases:

>100_bases
TTGCGAAGCCGCCACGAGATAGTTTACATATGAACTATCGAGGATCGGAGCCCGCCGAATCGGTGCGGCTCACCTCAAAA
AGATGCGGGAGGCTGACGCG

Downstream 100 bases:

>100_bases
GCACGCGCGAGACCTGAGCCCTCCCCCGTCTCGGCGGCGGAGGGTGGGGCGAGGGGAAGCGCCGCATCTGGAACGACCGG
AGCCGGCCCCTCACCCGCCC

Product: acyl-CoA dehydrogenase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 595

Protein sequence:

>596_residues
MPSYRAPVEDTLFLLNDVLAIHRYDNLPGFADASADLAQAVLSEGGRLAGEVFAPLNLSGDREGCTRREDGSVVTPKGFK
AAYDAYAAGGWMGLSIPEEFGGQGLPHVLNTAMQEFVSGANLALSMYPGLTQGAIAALLVHGSPEQKATYLPKMVEGAWT
GTMNLTEPHCGTDLGLLKTKAVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVVPKFLVNAD
GSVGERNAVACGSIEHKMGIHANSTCVMNYDGAKGWLVGQENRGLAAMFVMMNEARLAVGVQGLGQSEAAYQNAVAYAQE
RLQGRSLTGAKAPDKAADPIIVHPDVRRTLMQIRAFNEAARALMLWTALNSDIAHRSQDAAERQTAEDMLGLMTPVVKGV
LTDRGFANAVEAQQMFGGHGYVEEWGMSQFVRDARIAMIYEGANGIQAMDLIGRKLPKDGGRAMMAFLTEVQTFIKDHGE
DEGMKPFVAPLQPALNDLQAAVMWLMQNAFSKPDNAGAAATDLMHLLGQVVLGYMWAKIARAALAKKAEGADVERMDAKL
VLGRFFMERMLPETSLRLARIKAGAETTMALPAEAF

Sequences:

>Translated_596_residues
MPSYRAPVEDTLFLLNDVLAIHRYDNLPGFADASADLAQAVLSEGGRLAGEVFAPLNLSGDREGCTRREDGSVVTPKGFK
AAYDAYAAGGWMGLSIPEEFGGQGLPHVLNTAMQEFVSGANLALSMYPGLTQGAIAALLVHGSPEQKATYLPKMVEGAWT
GTMNLTEPHCGTDLGLLKTKAVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVVPKFLVNAD
GSVGERNAVACGSIEHKMGIHANSTCVMNYDGAKGWLVGQENRGLAAMFVMMNEARLAVGVQGLGQSEAAYQNAVAYAQE
RLQGRSLTGAKAPDKAADPIIVHPDVRRTLMQIRAFNEAARALMLWTALNSDIAHRSQDAAERQTAEDMLGLMTPVVKGV
LTDRGFANAVEAQQMFGGHGYVEEWGMSQFVRDARIAMIYEGANGIQAMDLIGRKLPKDGGRAMMAFLTEVQTFIKDHGE
DEGMKPFVAPLQPALNDLQAAVMWLMQNAFSKPDNAGAAATDLMHLLGQVVLGYMWAKIARAALAKKAEGADVERMDAKL
VLGRFFMERMLPETSLRLARIKAGAETTMALPAEAF
>Mature_595_residues
PSYRAPVEDTLFLLNDVLAIHRYDNLPGFADASADLAQAVLSEGGRLAGEVFAPLNLSGDREGCTRREDGSVVTPKGFKA
AYDAYAAGGWMGLSIPEEFGGQGLPHVLNTAMQEFVSGANLALSMYPGLTQGAIAALLVHGSPEQKATYLPKMVEGAWTG
TMNLTEPHCGTDLGLLKTKAVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVVPKFLVNADG
SVGERNAVACGSIEHKMGIHANSTCVMNYDGAKGWLVGQENRGLAAMFVMMNEARLAVGVQGLGQSEAAYQNAVAYAQER
LQGRSLTGAKAPDKAADPIIVHPDVRRTLMQIRAFNEAARALMLWTALNSDIAHRSQDAAERQTAEDMLGLMTPVVKGVL
TDRGFANAVEAQQMFGGHGYVEEWGMSQFVRDARIAMIYEGANGIQAMDLIGRKLPKDGGRAMMAFLTEVQTFIKDHGED
EGMKPFVAPLQPALNDLQAAVMWLMQNAFSKPDNAGAAATDLMHLLGQVVLGYMWAKIARAALAKKAEGADVERMDAKLV
LGRFFMERMLPETSLRLARIKAGAETTMALPAEAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=370, Percent_Identity=27.2972972972973, Blast_Score=116, Evalue=7e-26,
Organism=Homo sapiens, GI226958412, Length=375, Percent_Identity=25.8666666666667, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI226958414, Length=375, Percent_Identity=25.8666666666667, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI4501857, Length=377, Percent_Identity=25.4641909814324, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI7656849, Length=374, Percent_Identity=27.0053475935829, Blast_Score=98, Evalue=3e-20,
Organism=Homo sapiens, GI4557233, Length=376, Percent_Identity=28.4574468085106, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI4557235, Length=364, Percent_Identity=25.5494505494505, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI76496475, Length=364, Percent_Identity=25.5494505494505, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI21361497, Length=377, Percent_Identity=23.342175066313, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI4557231, Length=367, Percent_Identity=24.7956403269755, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI187960098, Length=367, Percent_Identity=24.7956403269755, Blast_Score=75, Evalue=2e-13,
Organism=Escherichia coli, GI87082384, Length=375, Percent_Identity=29.0666666666667, Blast_Score=120, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17508101, Length=424, Percent_Identity=27.8301886792453, Blast_Score=124, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17506239, Length=370, Percent_Identity=27.027027027027, Blast_Score=108, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI86563381, Length=403, Percent_Identity=26.0545905707196, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI86563383, Length=403, Percent_Identity=26.0545905707196, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71990804, Length=280, Percent_Identity=28.5714285714286, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71985184, Length=375, Percent_Identity=24.5333333333333, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17538396, Length=378, Percent_Identity=26.1904761904762, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17533517, Length=371, Percent_Identity=26.6846361185984, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17569725, Length=375, Percent_Identity=26.9333333333333, Blast_Score=92, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17534899, Length=373, Percent_Identity=26.2734584450402, Blast_Score=92, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI32563615, Length=237, Percent_Identity=28.2700421940928, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71985192, Length=255, Percent_Identity=27.0588235294118, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17570075, Length=374, Percent_Identity=23.7967914438503, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17505929, Length=365, Percent_Identity=25.2054794520548, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17551932, Length=379, Percent_Identity=24.0105540897098, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI281363737, Length=363, Percent_Identity=27.8236914600551, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI21355753, Length=390, Percent_Identity=28.2051282051282, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI21356377, Length=376, Percent_Identity=28.4574468085106, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI24666513, Length=418, Percent_Identity=26.3157894736842, Blast_Score=105, Evalue=9e-23,
Organism=Drosophila melanogaster, GI24646207, Length=383, Percent_Identity=25.5874673629243, Blast_Score=91, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 63775; Mature: 63644

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSYRAPVEDTLFLLNDVLAIHRYDNLPGFADASADLAQAVLSEGGRLAGEVFAPLNLSG
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEHEEECCCCCC
DREGCTRREDGSVVTPKGFKAAYDAYAAGGWMGLSIPEEFGGQGLPHVLNTAMQEFVSGA
CCCCCCCCCCCCEECCCCCHHHHHHHHCCCEEECCCCHHHCCCCCHHHHHHHHHHHHCCC
NLALSMYPGLTQGAIAALLVHGSPEQKATYLPKMVEGAWTGTMNLTEPHCGTDLGLLKTK
CEEEEECCCCCHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEEC
AVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVVPKFLVNAD
CCCCCCCCEEEECEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCC
GSVGERNAVACGSIEHKMGIHANSTCVMNYDGAKGWLVGQENRGLAAMFVMMNEARLAVG
CCCCCCCCEECCCCHHHCCCCCCCEEEEECCCCCCEEEECCCCCCEEEEEHHHCHHHEEE
VQGLGQSEAAYQNAVAYAQERLQGRSLTGAKAPDKAADPIIVHPDVRRTLMQIRAFNEAA
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHH
RALMLWTALNSDIAHRSQDAAERQTAEDMLGLMTPVVKGVLTDRGFANAVEAQQMFGGHG
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
YVEEWGMSQFVRDARIAMIYEGANGIQAMDLIGRKLPKDGGRAMMAFLTEVQTFIKDHGE
CHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
DEGMKPFVAPLQPALNDLQAAVMWLMQNAFSKPDNAGAAATDLMHLLGQVVLGYMWAKIA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RAALAKKAEGADVERMDAKLVLGRFFMERMLPETSLRLARIKAGAETTMALPAEAF
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEECCCCCCC
>Mature Secondary Structure 
PSYRAPVEDTLFLLNDVLAIHRYDNLPGFADASADLAQAVLSEGGRLAGEVFAPLNLSG
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEHEEECCCCCC
DREGCTRREDGSVVTPKGFKAAYDAYAAGGWMGLSIPEEFGGQGLPHVLNTAMQEFVSGA
CCCCCCCCCCCCEECCCCCHHHHHHHHCCCEEECCCCHHHCCCCCHHHHHHHHHHHHCCC
NLALSMYPGLTQGAIAALLVHGSPEQKATYLPKMVEGAWTGTMNLTEPHCGTDLGLLKTK
CEEEEECCCCCHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEEC
AVPNGDGSYSLTGTKIFISAGEHDLSENIVHLVIARIEGAPSGTKGISLFVVPKFLVNAD
CCCCCCCCEEEECEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCC
GSVGERNAVACGSIEHKMGIHANSTCVMNYDGAKGWLVGQENRGLAAMFVMMNEARLAVG
CCCCCCCCEECCCCHHHCCCCCCCEEEEECCCCCCEEEECCCCCCEEEEEHHHCHHHEEE
VQGLGQSEAAYQNAVAYAQERLQGRSLTGAKAPDKAADPIIVHPDVRRTLMQIRAFNEAA
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHH
RALMLWTALNSDIAHRSQDAAERQTAEDMLGLMTPVVKGVLTDRGFANAVEAQQMFGGHG
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
YVEEWGMSQFVRDARIAMIYEGANGIQAMDLIGRKLPKDGGRAMMAFLTEVQTFIKDHGE
CHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
DEGMKPFVAPLQPALNDLQAAVMWLMQNAFSKPDNAGAAATDLMHLLGQVVLGYMWAKIA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RAALAKKAEGADVERMDAKLVLGRFFMERMLPETSLRLARIKAGAETTMALPAEAF
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]