| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is katX [H]
Identifier: 218531466
GI number: 218531466
Start: 3719082
End: 3720674
Strand: Reverse
Name: katX [H]
Synonym: Mchl_3534
Alternate gene names: 218531466
Gene position: 3720674-3719082 (Counterclockwise)
Preceding gene: 218531470
Following gene: 218531458
Centisome position: 64.39
GC content: 66.23
Gene sequence:
>1593_bases ATGAGCGAGAACCGTCCGATTCTGACGACCCGTCAGGGCCATCCGGTCCGCGACAACCAGAGCACGCGCACGGTCGGCGA GCGGGGCCCGGCAACGCTCGAGAACTACCAGTTCATCGAGAAGATCACCCATTTCGACCGCGAGCGCATTCCGGAGCGCG TGGTGCATGCCCGCGGTGCCGGCGCCCATGGCTGGTTTGAGGCCTATGGCAAGATCGGCGACGAGCCCGCGTCCAAGTAC ACCCGCGCCCGCGTGCTGAACGAGACCGGCGTGAAGACGCCGATGTTTGTGCGCTTCTCCACCGTGGCCGGCGCCAAGGA GAGCCCTGAGACCGAGCGCGACCCGCGCGGCTTCGCGGTGAAGTTCAAGACCGTCGACGGCAATTGGGACCTCGTGGGCA ACAACCTCAAGGTCTTCTTCATCCGCGACGCGATCAAGTTCCCCGACATGATCCACGCGTTCAAGCCGGACCCGGTGACG AACCGCCAGGAGGCGTGGCGCTTCTTCGACTTCGTGGCCCAGCACCCCGAAGCGATCCACATGGTCACCCACCTGAAGTC GCCTTGGGGCATTCCGGCCAACTATCGCGAGATGGAAGGCTCGGGCGTCAACACCTACAAGCTGGTCAACGACCAGGGCG AGGCGGTGCTCTGCAAGTTCCACTGGGAGCCCAAGCAGGGCGTGCGCAACCTGACCTCGGCCCAGGCGTCCGAGATCCAG GCCAAGGATGTCGGCCACGCGACGCGTGACCTCTACGACAACATCAAGGCCGGCAATTTCCCCGAGTGGGAATTCTGCGT GCAGATCATGCCCGACGGCCCGAACGACCACCTGTCGTTCGATCCGCTCGACGACACGAAGCTGTGGCCGGTCGAGGATT TCCCGCTGCTGCCGGTCGGCCGCATGGTGCTGGACCGCGTGCCGGACAACTTCTTCGCGGAAGTCGAGCAGTCGGCCTTC GGCACGGGCGTGCTCGTGGACGGCATCGACTTCTCGGACGACAAGATGCTCCAGGGCCGGACGCTGTCCTACTCGGACAC GCAGCGCTACCGCGTCGGCGCCAACTACCTGCAGCTGCCGATCAACGCGCCGCAGCCCGGCGTGAAGGTCTATTCGAACC AGCGCGACGGCCAGATGACCTACAGCGTCGATGGCACCGGCCCGAACCGCCACATCAACTACGAGCCCTCGACGCTCGCC GAGGGCCTGCGCGAGGCGCCCAAGCCGGCCAAGGATTACCACCAGCCGGTCCAGGGCAATCTCGGCCGCTACCAGACCTC GCGGACCGAGGATGACTACACCCAGGCCGGCGTTCGCTACCGCTCGTTCCAGGATTGGGAGCGTGAGGATCTGATCGCCA ACCTCGTGGCCGACATGAAGCAGTGCCCCGAGCCGATCCAGCTTCGGATGGTCTGGCACTTCTGGCACGCCGACGAGGAT TACGGCCGCCGCGTTGCCGAGGGCGCCGGGATCGATCTGGAGAAGGCCAAGGCCCTGCCGCCGCTGCCGGGCCGTGCCGC CCCGCATAAGCGCCTCCAGGCCGAGACCTACACCGACGGCAGCACCGCCGCGCACAAGGTCGCCGCCGAGTAA
Upstream 100 bases:
>100_bases CATGCCTGGGTCATACCATCGAAACAGAATGGTTCCAGGCTGTGCGGACGCGCCGAGCGATCCACCCTGAAGCCCCTGCC TCCCAAGGAGAGAGTGACGC
Downstream 100 bases:
>100_bases GGCGAACGGCCGAACGACGTAAAAAAACCCCGCTCGACCATCCGGTCGGGCGGGGTTTCTTTTTGGAAGAGGCGGGAGCC CCAAGCTGAGGCTCCCGTCG
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 530; Mature: 529
Protein sequence:
>530_residues MSENRPILTTRQGHPVRDNQSTRTVGERGPATLENYQFIEKITHFDRERIPERVVHARGAGAHGWFEAYGKIGDEPASKY TRARVLNETGVKTPMFVRFSTVAGAKESPETERDPRGFAVKFKTVDGNWDLVGNNLKVFFIRDAIKFPDMIHAFKPDPVT NRQEAWRFFDFVAQHPEAIHMVTHLKSPWGIPANYREMEGSGVNTYKLVNDQGEAVLCKFHWEPKQGVRNLTSAQASEIQ AKDVGHATRDLYDNIKAGNFPEWEFCVQIMPDGPNDHLSFDPLDDTKLWPVEDFPLLPVGRMVLDRVPDNFFAEVEQSAF GTGVLVDGIDFSDDKMLQGRTLSYSDTQRYRVGANYLQLPINAPQPGVKVYSNQRDGQMTYSVDGTGPNRHINYEPSTLA EGLREAPKPAKDYHQPVQGNLGRYQTSRTEDDYTQAGVRYRSFQDWEREDLIANLVADMKQCPEPIQLRMVWHFWHADED YGRRVAEGAGIDLEKAKALPPLPGRAAPHKRLQAETYTDGSTAAHKVAAE
Sequences:
>Translated_530_residues MSENRPILTTRQGHPVRDNQSTRTVGERGPATLENYQFIEKITHFDRERIPERVVHARGAGAHGWFEAYGKIGDEPASKY TRARVLNETGVKTPMFVRFSTVAGAKESPETERDPRGFAVKFKTVDGNWDLVGNNLKVFFIRDAIKFPDMIHAFKPDPVT NRQEAWRFFDFVAQHPEAIHMVTHLKSPWGIPANYREMEGSGVNTYKLVNDQGEAVLCKFHWEPKQGVRNLTSAQASEIQ AKDVGHATRDLYDNIKAGNFPEWEFCVQIMPDGPNDHLSFDPLDDTKLWPVEDFPLLPVGRMVLDRVPDNFFAEVEQSAF GTGVLVDGIDFSDDKMLQGRTLSYSDTQRYRVGANYLQLPINAPQPGVKVYSNQRDGQMTYSVDGTGPNRHINYEPSTLA EGLREAPKPAKDYHQPVQGNLGRYQTSRTEDDYTQAGVRYRSFQDWEREDLIANLVADMKQCPEPIQLRMVWHFWHADED YGRRVAEGAGIDLEKAKALPPLPGRAAPHKRLQAETYTDGSTAAHKVAAE >Mature_529_residues SENRPILTTRQGHPVRDNQSTRTVGERGPATLENYQFIEKITHFDRERIPERVVHARGAGAHGWFEAYGKIGDEPASKYT RARVLNETGVKTPMFVRFSTVAGAKESPETERDPRGFAVKFKTVDGNWDLVGNNLKVFFIRDAIKFPDMIHAFKPDPVTN RQEAWRFFDFVAQHPEAIHMVTHLKSPWGIPANYREMEGSGVNTYKLVNDQGEAVLCKFHWEPKQGVRNLTSAQASEIQA KDVGHATRDLYDNIKAGNFPEWEFCVQIMPDGPNDHLSFDPLDDTKLWPVEDFPLLPVGRMVLDRVPDNFFAEVEQSAFG TGVLVDGIDFSDDKMLQGRTLSYSDTQRYRVGANYLQLPINAPQPGVKVYSNQRDGQMTYSVDGTGPNRHINYEPSTLAE GLREAPKPAKDYHQPVQGNLGRYQTSRTEDDYTQAGVRYRSFQDWEREDLIANLVADMKQCPEPIQLRMVWHFWHADEDY GRRVAEGAGIDLEKAKALPPLPGRAAPHKRLQAETYTDGSTAAHKVAAE
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=481, Percent_Identity=44.0748440748441, Blast_Score=391, Evalue=1e-108, Organism=Escherichia coli, GI48994891, Length=498, Percent_Identity=41.7670682730924, Blast_Score=361, Evalue=1e-101, Organism=Caenorhabditis elegans, GI25147792, Length=479, Percent_Identity=44.4676409185804, Blast_Score=410, Evalue=1e-115, Organism=Caenorhabditis elegans, GI25151141, Length=479, Percent_Identity=44.4676409185804, Blast_Score=409, Evalue=1e-114, Organism=Caenorhabditis elegans, GI71998444, Length=480, Percent_Identity=43.75, Blast_Score=404, Evalue=1e-113, Organism=Saccharomyces cerevisiae, GI6320462, Length=496, Percent_Identity=37.2983870967742, Blast_Score=294, Evalue=2e-80, Organism=Saccharomyces cerevisiae, GI6321525, Length=515, Percent_Identity=32.4271844660194, Blast_Score=255, Evalue=2e-68, Organism=Drosophila melanogaster, GI17981717, Length=482, Percent_Identity=42.9460580912863, Blast_Score=389, Evalue=1e-108, Organism=Drosophila melanogaster, GI19920968, Length=489, Percent_Identity=40.4907975460123, Blast_Score=379, Evalue=1e-105,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 60016; Mature: 59885
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENRPILTTRQGHPVRDNQSTRTVGERGPATLENYQFIEKITHFDRERIPERVVHARGA CCCCCCEEEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC GAHGWFEAYGKIGDEPASKYTRARVLNETGVKTPMFVRFSTVAGAKESPETERDPRGFAV CCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEE KFKTVDGNWDLVGNNLKVFFIRDAIKFPDMIHAFKPDPVTNRQEAWRFFDFVAQHPEAIH EEEEECCCEEEECCCEEEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHH MVTHLKSPWGIPANYREMEGSGVNTYKLVNDQGEAVLCKFHWEPKQGVRNLTSAQASEIQ HHHHCCCCCCCCCCHHHCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHH AKDVGHATRDLYDNIKAGNFPEWEFCVQIMPDGPNDHLSFDPLDDTKLWPVEDFPLLPVG HHHCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH RMVLDRVPDNFFAEVEQSAFGTGVLVDGIDFSDDKMLQGRTLSYSDTQRYRVGANYLQLP HHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCEECCCCCCCCCCCCEEECCCEEEEE INAPQPGVKVYSNQRDGQMTYSVDGTGPNRHINYEPSTLAEGLREAPKPAKDYHQPVQGN CCCCCCCCEEECCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHHCCCCHHHHCCCCCCC LGRYQTSRTEDDYTQAGVRYRSFQDWEREDLIANLVADMKQCPEPIQLRMVWHFWHADED CCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCHH YGRRVAEGAGIDLEKAKALPPLPGRAAPHKRLQAETYTDGSTAAHKVAAE HHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure SENRPILTTRQGHPVRDNQSTRTVGERGPATLENYQFIEKITHFDRERIPERVVHARGA CCCCCEEEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC GAHGWFEAYGKIGDEPASKYTRARVLNETGVKTPMFVRFSTVAGAKESPETERDPRGFAV CCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEE KFKTVDGNWDLVGNNLKVFFIRDAIKFPDMIHAFKPDPVTNRQEAWRFFDFVAQHPEAIH EEEEECCCEEEECCCEEEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHH MVTHLKSPWGIPANYREMEGSGVNTYKLVNDQGEAVLCKFHWEPKQGVRNLTSAQASEIQ HHHHCCCCCCCCCCHHHCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHH AKDVGHATRDLYDNIKAGNFPEWEFCVQIMPDGPNDHLSFDPLDDTKLWPVEDFPLLPVG HHHCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH RMVLDRVPDNFFAEVEQSAFGTGVLVDGIDFSDDKMLQGRTLSYSDTQRYRVGANYLQLP HHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCEECCCCCCCCCCCCEEECCCEEEEE INAPQPGVKVYSNQRDGQMTYSVDGTGPNRHINYEPSTLAEGLREAPKPAKDYHQPVQGN CCCCCCCCEEECCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHHCCCCHHHHCCCCCCC LGRYQTSRTEDDYTQAGVRYRSFQDWEREDLIANLVADMKQCPEPIQLRMVWHFWHADED CCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCHH YGRRVAEGAGIDLEKAKALPPLPGRAAPHKRLQAETYTDGSTAAHKVAAE HHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]