| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is yiiP [C]
Identifier: 218531239
GI number: 218531239
Start: 3470572
End: 3471459
Strand: Reverse
Name: yiiP [C]
Synonym: Mchl_3290
Alternate gene names: 218531239
Gene position: 3471459-3470572 (Counterclockwise)
Preceding gene: 218531240
Following gene: 218531238
Centisome position: 60.08
GC content: 68.69
Gene sequence:
>888_bases ATGACAGGAACCGAAAAGGCTGCCCTGGCGAGCGCCGCCGTCGGCGTGCTCGTCACGGCGCTGAAATTCACCGCCTATTG GCTCACCGGCAGCCTCGCGCTCTATTCCGACGCGCTGGAGAGCATCATCAACGTCGTGGCCGCGGCCTGCGCGTTCCTGG CCGTGCGCGTCGCCGCGCAGCCGGCCGACGAGGATCACCCCTACGGCCACCACAAGGCGGAGTATTTCTCCGCGGTGATC GAGGGCGCGCTGGTCATCGTCGCCGCCCTGCTGATCCTGCGCGAGGCGTATTTCGGCATCCTCGATCCGAAGCCCCTCGA CGCGCCCGCGCTCGGTCTGGCCGTCAACGGCGTCGCCACCATCATCAACGCGGTCTGGGCGACGCTGCTGTTCCGGCGCG GCCGGCGGCTGCGCTCGCCCGCCCTGTTGGCCGATGCCCGCCACATCCTCGCCGACGTGGTGACATCGGGCGGCGTGCTC CTCGGCCTCGGCTTCGTCCTGGCCACGGGAACGCCGGTGCTCGATCCGGTCGTGGCGGGCTTGGTGGCCCTCAACATCCT CTGGTCGGGTTGGACGATGGTGCGCGATTCAATCAACGGCCTGATGGATCAGGCGGCCTCGCCCGAAATGGTCACGCGCA TTCGCGCCCTGATCTCGGCTCACAGCGAGGGCGCCCTGGAGGCCCACGACGTGCGCACCCGCCATGCCGGCAGCGCCACC TTCATCGACTTCCATCTTGTCGTGCCGGGCGAGATGACCGTGTTCGAATCCCACGCGATCTGCGACCGGCTGGAGGGGGT GATCGAAGCGGGGATCGAGGGCGCGGTCGTGGTGATCCATGTCGAGCCGGGCGATCAGGCCAAGCTGCGCGGCGTGCCCG TGATTTGA
Upstream 100 bases:
>100_bases GATCGGGACGGCGATAGCCCGAGCTAAAACCTTTGCCGTGGCCTTCCGGGGCCGCGGATCGTAAGGGCGGGACCGTCCCC TCCCCGCCCCCTTGAGCCGC
Downstream 100 bases:
>100_bases AGCCGGCTTCAGGCGCGATATCGGGGCTCGCGAAGCGGGTGTTCCTCATCTCCACGCCGAGCCACCGCAACGCCTACGGC CTGTTCGACGGATGCTGGGC
Product: cation diffusion facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MTGTEKAALASAAVGVLVTALKFTAYWLTGSLALYSDALESIINVVAAACAFLAVRVAAQPADEDHPYGHHKAEYFSAVI EGALVIVAALLILREAYFGILDPKPLDAPALGLAVNGVATIINAVWATLLFRRGRRLRSPALLADARHILADVVTSGGVL LGLGFVLATGTPVLDPVVAGLVALNILWSGWTMVRDSINGLMDQAASPEMVTRIRALISAHSEGALEAHDVRTRHAGSAT FIDFHLVVPGEMTVFESHAICDRLEGVIEAGIEGAVVVIHVEPGDQAKLRGVPVI
Sequences:
>Translated_295_residues MTGTEKAALASAAVGVLVTALKFTAYWLTGSLALYSDALESIINVVAAACAFLAVRVAAQPADEDHPYGHHKAEYFSAVI EGALVIVAALLILREAYFGILDPKPLDAPALGLAVNGVATIINAVWATLLFRRGRRLRSPALLADARHILADVVTSGGVL LGLGFVLATGTPVLDPVVAGLVALNILWSGWTMVRDSINGLMDQAASPEMVTRIRALISAHSEGALEAHDVRTRHAGSAT FIDFHLVVPGEMTVFESHAICDRLEGVIEAGIEGAVVVIHVEPGDQAKLRGVPVI >Mature_294_residues TGTEKAALASAAVGVLVTALKFTAYWLTGSLALYSDALESIINVVAAACAFLAVRVAAQPADEDHPYGHHKAEYFSAVIE GALVIVAALLILREAYFGILDPKPLDAPALGLAVNGVATIINAVWATLLFRRGRRLRSPALLADARHILADVVTSGGVLL GLGFVLATGTPVLDPVVAGLVALNILWSGWTMVRDSINGLMDQAASPEMVTRIRALISAHSEGALEAHDVRTRHAGSATF IDFHLVVPGEMTVFESHAICDRLEGVIEAGIEGAVVVIHVEPGDQAKLRGVPVI
Specific function: Unknown
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=269, Percent_Identity=30.4832713754647, Blast_Score=131, Evalue=4e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 30957; Mature: 30826
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTEKAALASAAVGVLVTALKFTAYWLTGSLALYSDALESIINVVAAACAFLAVRVAAQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PADEDHPYGHHKAEYFSAVIEGALVIVAALLILREAYFGILDPKPLDAPALGLAVNGVAT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH IINAVWATLLFRRGRRLRSPALLADARHILADVVTSGGVLLGLGFVLATGTPVLDPVVAG HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHH LVALNILWSGWTMVRDSINGLMDQAASPEMVTRIRALISAHSEGALEAHDVRTRHAGSAT HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEE FIDFHLVVPGEMTVFESHAICDRLEGVIEAGIEGAVVVIHVEPGDQAKLRGVPVI EEEEEEEECCCEEHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure TGTEKAALASAAVGVLVTALKFTAYWLTGSLALYSDALESIINVVAAACAFLAVRVAAQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PADEDHPYGHHKAEYFSAVIEGALVIVAALLILREAYFGILDPKPLDAPALGLAVNGVAT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH IINAVWATLLFRRGRRLRSPALLADARHILADVVTSGGVLLGLGFVLATGTPVLDPVVAG HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHH LVALNILWSGWTMVRDSINGLMDQAASPEMVTRIRALISAHSEGALEAHDVRTRHAGSAT HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEE FIDFHLVVPGEMTVFESHAICDRLEGVIEAGIEGAVVVIHVEPGDQAKLRGVPVI EEEEEEEECCCEEHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]