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The map label for this gene is ureD3 [H]

Identifier: 218531194

GI number: 218531194

Start: 3426457

End: 3427386

Strand: Reverse

Name: ureD3 [H]

Synonym: Mchl_3245

Alternate gene names: 218531194

Gene position: 3427386-3426457 (Counterclockwise)

Preceding gene: 218531196

Following gene: 218531193

Centisome position: 59.32

GC content: 74.84

Gene sequence:

>930_bases
ATGGGGCCCGCCACCTTGCGGACCGGGGCTCCGGTGGCCGATGAAGCCGGCACCCGCTCCGCCGGAGGCCGTCCGATCCC
TGCCGCCGAACCGCTCCGCCCCGCCTTGTCTCGCCAGCGCTCGCAGGGCGCGGTGCATCTGCGCGTCGCCCCGGCCGGAA
CAGCCGCGGACGCGCCGACGCGGATCGTCGATCTCGCCGAGAGCGGCCCCTTGCGCCTGCGCTGTCCCCGCCAGGGCGCC
GAGCGGATGCTGGAGGGCGTGCTCGTCAACACCGGCGGCGGCATCGCCTGCGGCGATGTGTTCGCGGTATCGGTGACGGT
CGAGCCGGGTGGGGCCTGCGTGCTGACCACCACCGCGGCGGAGAAGATTTACCGCTCGGACGGACCCTGCGCGCAGATCG
TCAACCGGGCCAGCGTCGGCGCGGGCGGGCGGCTCGATTGGCTGCCGCAGGAGACGATCCTGTTCGACCGCGCCCGGCTG
GTGCGCCGCTTCGAGGCGGATCTTGCCCCCGACGCGTCGCTGCTTGTTGCCGAGATCGCGGTGCTCGGCCGTGCCGCCCG
CGGCGAAAACCTGGAACAGGCCCTGTTCGAGGATCGCTGGCGCATCCGCCGCGACGGCCGCCTCGTCTACGCCGACAGCC
TGCGCCTCGACGGCGCGGTCACGGCCCTCATGGACCGCCGGGCGATCGGCGGCGGGGCCCGCGCGTTGGCGACGATCCTC
GACCTTTCGCCGTCTGCGCAAGGCCGGCTTGACGAGGCCCGTGCCCTCCTCGACGCCCTGCCGGCGCAGGTGGAGGCCGG
GGCGAGCGCCTGGAACGGCCATCTCGCCGTGCGGATGCTGGCCCCCACCGTCGCTCCCCTGCGCGACGCCGCCGCCCGCT
TCCTCGCCGCATGGCGCGGGCAGCCGATGCCGCGTGTGTGGCAGACCTGA

Upstream 100 bases:

>100_bases
GTCAAGGGGAAGAGTGACCACCTCACGGTCAAGAACGGCCGTCGCTGCCCGCATCCTGTGCCATCGCTGCCAAAGATCGG
TGCGGGATGGCACCCGACCG

Downstream 100 bases:

>100_bases
TCAGCTTGACCTTGGGCCGAGCATGATCCTTGCTCGGCCCACTTTCAGGCCCGCCCGACTCTCACCTCAGGACGCACGCC
TTGCTCCTTACGCCCCGCGA

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MGPATLRTGAPVADEAGTRSAGGRPIPAAEPLRPALSRQRSQGAVHLRVAPAGTAADAPTRIVDLAESGPLRLRCPRQGA
ERMLEGVLVNTGGGIACGDVFAVSVTVEPGGACVLTTTAAEKIYRSDGPCAQIVNRASVGAGGRLDWLPQETILFDRARL
VRRFEADLAPDASLLVAEIAVLGRAARGENLEQALFEDRWRIRRDGRLVYADSLRLDGAVTALMDRRAIGGGARALATIL
DLSPSAQGRLDEARALLDALPAQVEAGASAWNGHLAVRMLAPTVAPLRDAAARFLAAWRGQPMPRVWQT

Sequences:

>Translated_309_residues
MGPATLRTGAPVADEAGTRSAGGRPIPAAEPLRPALSRQRSQGAVHLRVAPAGTAADAPTRIVDLAESGPLRLRCPRQGA
ERMLEGVLVNTGGGIACGDVFAVSVTVEPGGACVLTTTAAEKIYRSDGPCAQIVNRASVGAGGRLDWLPQETILFDRARL
VRRFEADLAPDASLLVAEIAVLGRAARGENLEQALFEDRWRIRRDGRLVYADSLRLDGAVTALMDRRAIGGGARALATIL
DLSPSAQGRLDEARALLDALPAQVEAGASAWNGHLAVRMLAPTVAPLRDAAARFLAAWRGQPMPRVWQT
>Mature_308_residues
GPATLRTGAPVADEAGTRSAGGRPIPAAEPLRPALSRQRSQGAVHLRVAPAGTAADAPTRIVDLAESGPLRLRCPRQGAE
RMLEGVLVNTGGGIACGDVFAVSVTVEPGGACVLTTTAAEKIYRSDGPCAQIVNRASVGAGGRLDWLPQETILFDRARLV
RRFEADLAPDASLLVAEIAVLGRAARGENLEQALFEDRWRIRRDGRLVYADSLRLDGAVTALMDRRAIGGGARALATILD
LSPSAQGRLDEARALLDALPAQVEAGASAWNGHLAVRMLAPTVAPLRDAAARFLAAWRGQPMPRVWQT

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 32534; Mature: 32402

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPATLRTGAPVADEAGTRSAGGRPIPAAEPLRPALSRQRSQGAVHLRVAPAGTAADAPT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCH
RIVDLAESGPLRLRCPRQGAERMLEGVLVNTGGGIACGDVFAVSVTVEPGGACVLTTTAA
HEEECCCCCCEEEECCHHHHHHHHHCEEEECCCCEEECCEEEEEEEECCCCCEEEEEHHH
EKIYRSDGPCAQIVNRASVGAGGRLDWLPQETILFDRARLVRRFEADLAPDASLLVAEIA
HHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VLGRAARGENLEQALFEDRWRIRRDGRLVYADSLRLDGAVTALMDRRAIGGGARALATIL
HHHHHCCCCCHHHHHHHHHHHEECCCEEEEECCEECCHHHHHHHHHHHCCCHHHHHHHHH
DLSPSAQGRLDEARALLDALPAQVEAGASAWNGHLAVRMLAPTVAPLRDAAARFLAAWRG
HCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCC
QPMPRVWQT
CCCCHHCCC
>Mature Secondary Structure 
GPATLRTGAPVADEAGTRSAGGRPIPAAEPLRPALSRQRSQGAVHLRVAPAGTAADAPT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCH
RIVDLAESGPLRLRCPRQGAERMLEGVLVNTGGGIACGDVFAVSVTVEPGGACVLTTTAA
HEEECCCCCCEEEECCHHHHHHHHHCEEEECCCCEEECCEEEEEEEECCCCCEEEEEHHH
EKIYRSDGPCAQIVNRASVGAGGRLDWLPQETILFDRARLVRRFEADLAPDASLLVAEIA
HHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VLGRAARGENLEQALFEDRWRIRRDGRLVYADSLRLDGAVTALMDRRAIGGGARALATIL
HHHHHCCCCCHHHHHHHHHHHEECCCEEEEECCEECCHHHHHHHHHHHCCCHHHHHHHHH
DLSPSAQGRLDEARALLDALPAQVEAGASAWNGHLAVRMLAPTVAPLRDAAARFLAAWRG
HCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCC
QPMPRVWQT
CCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA