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The map label for this gene is ureF [H]

Identifier: 218531188

GI number: 218531188

Start: 3421788

End: 3422504

Strand: Reverse

Name: ureF [H]

Synonym: Mchl_3239

Alternate gene names: 218531188

Gene position: 3422504-3421788 (Counterclockwise)

Preceding gene: 218531189

Following gene: 218531187

Centisome position: 59.23

GC content: 71.41

Gene sequence:

>717_bases
ATGGCCACGGTCACGGACATTCACACGATCACCCGCACGCCCATGATTGACGCCCTACGACTGATGGCGTGGCTCTCGCC
GACCTATCCGGTCGGCGCCTTCGCCTATTCGCATGCGCTCGAATGGGCGGTGGAGTGCGGCGACGTCCGCGACGCCGCCA
CCCTCGGCGATTGGCTCGCCGACGTGCTGGAGCGGGGCGCGGGGCGCAACGACATGATTCTCTGCGCCGCCGCGCATCGC
GCCACCGAGGCCGGAGACGATGCGGGATTGGCCGAGATCAACGACCTCGCTTTGGCACTCGCCCCCTCCCGCGAGCTTCA
TCTGGAGACGAGCCAGCAAGGGCGCAGCTTCCTGGATGCGACGCTGCGGGCCTGGCCTTGCCCTGCCCTCACAACGGTCG
CCGACCGGCTGAATGCCGAGGTCGCCTACCCCGTCGCCGTCGGCGCGGCGGCGGGCGCGCACGGCGTCGCGCGGGCGGCG
ACGGTGGCGGCCTACGGCCTCGCCTTCGTCCAGAATCTCGTCTCGGCGGCGCTGCGTGTGGCGCCGGTCGGCCAGAGCGC
GGGCACGACGATTCTCGCCGCGCTGACCCCCCGCGTCGCCGGACTGGCCGAGGCGCTGCATGAGGCCGGACTCGACGCGC
TCGGCAGCGCGACCCTGCGGCTCGATCTCGGCTCCTTCCGGCACGAGACGCAGTATTCCCGCATCTTCCGCTCCTGA

Upstream 100 bases:

>100_bases
CACGTGCTCGCCGAGATGGTGCGGGGTTTGGGCGGCAGCGCCGAGCCGGTGACGCGGCCCTTCCGGCCGGAGGGCGGCGC
CTATGCCGGCGGTCATGCCC

Downstream 100 bases:

>100_bases
GGATTTTTGGAAGTCATGGCATCCGTGAACGGACCCCTGCGCGTCGGCATCGGCGGACCCGTCGGCTCCGGCAAGACCGC
GCTGATGGAGCAGCTCTGCC

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MATVTDIHTITRTPMIDALRLMAWLSPTYPVGAFAYSHALEWAVECGDVRDAATLGDWLADVLERGAGRNDMILCAAAHR
ATEAGDDAGLAEINDLALALAPSRELHLETSQQGRSFLDATLRAWPCPALTTVADRLNAEVAYPVAVGAAAGAHGVARAA
TVAAYGLAFVQNLVSAALRVAPVGQSAGTTILAALTPRVAGLAEALHEAGLDALGSATLRLDLGSFRHETQYSRIFRS

Sequences:

>Translated_238_residues
MATVTDIHTITRTPMIDALRLMAWLSPTYPVGAFAYSHALEWAVECGDVRDAATLGDWLADVLERGAGRNDMILCAAAHR
ATEAGDDAGLAEINDLALALAPSRELHLETSQQGRSFLDATLRAWPCPALTTVADRLNAEVAYPVAVGAAAGAHGVARAA
TVAAYGLAFVQNLVSAALRVAPVGQSAGTTILAALTPRVAGLAEALHEAGLDALGSATLRLDLGSFRHETQYSRIFRS
>Mature_237_residues
ATVTDIHTITRTPMIDALRLMAWLSPTYPVGAFAYSHALEWAVECGDVRDAATLGDWLADVLERGAGRNDMILCAAAHRA
TEAGDDAGLAEINDLALALAPSRELHLETSQQGRSFLDATLRAWPCPALTTVADRLNAEVAYPVAVGAAAGAHGVARAAT
VAAYGLAFVQNLVSAALRVAPVGQSAGTTILAALTPRVAGLAEALHEAGLDALGSATLRLDLGSFRHETQYSRIFRS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002639 [H]

Pfam domain/function: PF01730 UreF [H]

EC number: NA

Molecular weight: Translated: 24898; Mature: 24767

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATVTDIHTITRTPMIDALRLMAWLSPTYPVGAFAYSHALEWAVECGDVRDAATLGDWLA
CCCCHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
DVLERGAGRNDMILCAAAHRATEAGDDAGLAEINDLALALAPSRELHLETSQQGRSFLDA
HHHHHCCCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHEEECCCCCEEECCHHHHHHHHHH
TLRAWPCPALTTVADRLNAEVAYPVAVGAAAGAHGVARAATVAAYGLAFVQNLVSAALRV
HHHHCCCCHHHHHHHHHCCCEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APVGQSAGTTILAALTPRVAGLAEALHEAGLDALGSATLRLDLGSFRHETQYSRIFRS
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHCHHHHCCEEEEEECHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ATVTDIHTITRTPMIDALRLMAWLSPTYPVGAFAYSHALEWAVECGDVRDAATLGDWLA
CCCHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
DVLERGAGRNDMILCAAAHRATEAGDDAGLAEINDLALALAPSRELHLETSQQGRSFLDA
HHHHHCCCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHEEECCCCCEEECCHHHHHHHHHH
TLRAWPCPALTTVADRLNAEVAYPVAVGAAAGAHGVARAATVAAYGLAFVQNLVSAALRV
HHHHCCCCHHHHHHHHHCCCEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APVGQSAGTTILAALTPRVAGLAEALHEAGLDALGSATLRLDLGSFRHETQYSRIFRS
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHCHHHHCCEEEEEECHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA