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The map label for this gene is yebA [H]

Identifier: 218531159

GI number: 218531159

Start: 3388899

End: 3390077

Strand: Reverse

Name: yebA [H]

Synonym: Mchl_3209

Alternate gene names: 218531159

Gene position: 3390077-3388899 (Counterclockwise)

Preceding gene: 218531160

Following gene: 218531157

Centisome position: 58.67

GC content: 73.96

Gene sequence:

>1179_bases
ATGCCATCGACTGCTCAGGCCCGCCGCAAAGCCGGCCTTTCCCCTCTCTCCCAAAGCCGTCTCGTCCGGGCGCTCGGCCT
TGGGCTCGCCGTCTCGACGCTCTGGGCGGCGGCCGCGAGCTACTACCTCGTCTTCCACGACGAGATGCTGGCCCGCTTCG
TCTCGCGCCAGAGCGCGATGCAGTTCACCTACGAGGAGCGGATCGGCACCCTTCAACGCGCCCTCGACCGCGCGGCGGCC
GAGCGCAACGCGGAGCGCGGCAGCGTCGAGAACCGGCTTTCCGCGCTGACCGAGCGGCAGGCCCTGATCGAGAAGCGCCA
GGGGTTGCTCTCCGGTCTGGGTGGGGCCGCCGCGCCGATCGATGATGTGCCGCCGCCTGCCCCGATCCCGGTCGCGGAGC
CGGCGGCGCGTGTCCAGAAGCCGTTCCCGACGCCGGAACTGCGCATGGGCGGCGAGGACCGGGCCGAGGCCGCCGGCCGC
GCCTCCTCCGCGCGCCTGTCGCGCCTGGAGGAGGCGCTCCATCGTGTCGCCGAGGCGCAGTCGCGTGCCGCGGCCGGCAT
CGCCCAGCAGGCCGGGCGCAGCGCCGAACGCTTCCGCGACCTGATTGCCCGCACGGGTCTGTCGCCGGCCCGGTTCGATC
CGCCTCCGGGCGGCGTCGGCGGCCCCCTCGTTCCGCTCGGGCCCGACGCCTTCGAGCAGGCGCTGGCCGAGGCCCGCCGT
CAGATCGAGGAGGAGACGCATCTGCGCCGGGTGACCGCCGCCCTCCCCTTCCGCCAGCCGCTGCCGGGCGATCTCGCTTT
CACCAGCAGCTTCGGCGCCCGCCTCGATCCGTTCACCCGCGGCTACGCGCTCCATACGGGCGTGGATATGCGCGCCGAGA
CCGGCGCCCCGGTCCGGGCCACCGCCGCGGGGCGGATCACGGCGGCCGAGTATGCCGGCGGCTACGGCAACATGGTCGAG
GTCGATCACGGCCGTGGCCTCGTCACGCGCTACGCGCACCTCTCCGGCACCGCGGTCGCGGTCGGCCAGCGGGTCGAGGC
GGGAAGTGTGGTCGGGTTTGCCGGCTCGACCGGCCGCTCGACCGGCAGCCACCTGCATTACGAGACCCGCATCGACGGCG
AGCCGGTCGATCCGCAGCGGTTCCTGCGAGCCGGGGCGCAGCTCGTCTTCGCCGATTGA

Upstream 100 bases:

>100_bases
GCCTCGTGTTTCGATGCGGGCAGCGGATCGCTAACAAACGCTAGGCTTCCTTAACCTTAATCGTCTGTGATCGGGCCCGT
CTCCGAACGTCCGACGTGCC

Downstream 100 bases:

>100_bases
TCCCGAATGTCCCCTCCCCGTGAGGAGAGGAGACTAGAGCATCGTCCCGAAAGGTGGTTGCCGGCTTTCGGAAAAGATGA
TGCAAAAACACGTGCTTAGA

Product: peptidase M23

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MPSTAQARRKAGLSPLSQSRLVRALGLGLAVSTLWAAAASYYLVFHDEMLARFVSRQSAMQFTYEERIGTLQRALDRAAA
ERNAERGSVENRLSALTERQALIEKRQGLLSGLGGAAAPIDDVPPPAPIPVAEPAARVQKPFPTPELRMGGEDRAEAAGR
ASSARLSRLEEALHRVAEAQSRAAAGIAQQAGRSAERFRDLIARTGLSPARFDPPPGGVGGPLVPLGPDAFEQALAEARR
QIEEETHLRRVTAALPFRQPLPGDLAFTSSFGARLDPFTRGYALHTGVDMRAETGAPVRATAAGRITAAEYAGGYGNMVE
VDHGRGLVTRYAHLSGTAVAVGQRVEAGSVVGFAGSTGRSTGSHLHYETRIDGEPVDPQRFLRAGAQLVFAD

Sequences:

>Translated_392_residues
MPSTAQARRKAGLSPLSQSRLVRALGLGLAVSTLWAAAASYYLVFHDEMLARFVSRQSAMQFTYEERIGTLQRALDRAAA
ERNAERGSVENRLSALTERQALIEKRQGLLSGLGGAAAPIDDVPPPAPIPVAEPAARVQKPFPTPELRMGGEDRAEAAGR
ASSARLSRLEEALHRVAEAQSRAAAGIAQQAGRSAERFRDLIARTGLSPARFDPPPGGVGGPLVPLGPDAFEQALAEARR
QIEEETHLRRVTAALPFRQPLPGDLAFTSSFGARLDPFTRGYALHTGVDMRAETGAPVRATAAGRITAAEYAGGYGNMVE
VDHGRGLVTRYAHLSGTAVAVGQRVEAGSVVGFAGSTGRSTGSHLHYETRIDGEPVDPQRFLRAGAQLVFAD
>Mature_391_residues
PSTAQARRKAGLSPLSQSRLVRALGLGLAVSTLWAAAASYYLVFHDEMLARFVSRQSAMQFTYEERIGTLQRALDRAAAE
RNAERGSVENRLSALTERQALIEKRQGLLSGLGGAAAPIDDVPPPAPIPVAEPAARVQKPFPTPELRMGGEDRAEAAGRA
SSARLSRLEEALHRVAEAQSRAAAGIAQQAGRSAERFRDLIARTGLSPARFDPPPGGVGGPLVPLGPDAFEQALAEARRQ
IEEETHLRRVTAALPFRQPLPGDLAFTSSFGARLDPFTRGYALHTGVDMRAETGAPVRATAAGRITAAEYAGGYGNMVEV
DHGRGLVTRYAHLSGTAVAVGQRVEAGSVVGFAGSTGRSTGSHLHYETRIDGEPVDPQRFLRAGAQLVFAD

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=123, Percent_Identity=39.0243902439024, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI87082297, Length=96, Percent_Identity=36.4583333333333, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789099, Length=102, Percent_Identity=37.2549019607843, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI87082174, Length=115, Percent_Identity=32.1739130434783, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 41639; Mature: 41508

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSTAQARRKAGLSPLSQSRLVRALGLGLAVSTLWAAAASYYLVFHDEMLARFVSRQSAM
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFTYEERIGTLQRALDRAAAERNAERGSVENRLSALTERQALIEKRQGLLSGLGGAAAPI
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DDVPPPAPIPVAEPAARVQKPFPTPELRMGGEDRAEAAGRASSARLSRLEEALHRVAEAQ
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SRAAAGIAQQAGRSAERFRDLIARTGLSPARFDPPPGGVGGPLVPLGPDAFEQALAEARR
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
QIEEETHLRRVTAALPFRQPLPGDLAFTSSFGARLDPFTRGYALHTGVDMRAETGAPVRA
HHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHCCEEEECCCCCCCCCCCCEEE
TAAGRITAAEYAGGYGNMVEVDHGRGLVTRYAHLSGTAVAVGQRVEAGSVVGFAGSTGRS
CCCCCEEHHHHCCCCCCEEEECCCCCHHHHHHHHCCCHHHHCCCCCCCCEEEECCCCCCC
TGSHLHYETRIDGEPVDPQRFLRAGAQLVFAD
CCCCEEEEEECCCCCCCHHHHHHHCCCEEECC
>Mature Secondary Structure 
PSTAQARRKAGLSPLSQSRLVRALGLGLAVSTLWAAAASYYLVFHDEMLARFVSRQSAM
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFTYEERIGTLQRALDRAAAERNAERGSVENRLSALTERQALIEKRQGLLSGLGGAAAPI
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DDVPPPAPIPVAEPAARVQKPFPTPELRMGGEDRAEAAGRASSARLSRLEEALHRVAEAQ
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SRAAAGIAQQAGRSAERFRDLIARTGLSPARFDPPPGGVGGPLVPLGPDAFEQALAEARR
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
QIEEETHLRRVTAALPFRQPLPGDLAFTSSFGARLDPFTRGYALHTGVDMRAETGAPVRA
HHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHCCEEEECCCCCCCCCCCCEEE
TAAGRITAAEYAGGYGNMVEVDHGRGLVTRYAHLSGTAVAVGQRVEAGSVVGFAGSTGRS
CCCCCEEHHHHCCCCCCEEEECCCCCHHHHHHHHCCCHHHHCCCCCCCCEEEECCCCCCC
TGSHLHYETRIDGEPVDPQRFLRAGAQLVFAD
CCCCEEEEEECCCCCCCHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]