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The map label for this gene is omp31 [H]

Identifier: 218531058

GI number: 218531058

Start: 3288810

End: 3289682

Strand: Reverse

Name: omp31 [H]

Synonym: Mchl_3108

Alternate gene names: 218531058

Gene position: 3289682-3288810 (Counterclockwise)

Preceding gene: 218531059

Following gene: 218531057

Centisome position: 56.94

GC content: 69.42

Gene sequence:

>873_bases
ATGAAATCCTTCCTTCGCGCCGGCACGGCCATCGCCGGCATCGCCTTCGCCGGTTCGGCGCTCGCCGCCGACCTCCCGCG
CCGCGCGGCTCCGCCGCCGGTGTTCCAGCCGGTGCCGGTGTTCACCTGGACGGGCTTCTACGCCGGTTTCAACGCCGGTT
ACGGCTTCGGCACCCAGGATGACCGCGTCCCGACCGTGATCGGCGTCGGCCCGGCCTCCCTGCTCGTGCCCCCGGGCACC
ACCGCCGTGGTCGCCTTCAGCAACCGCGAGTCCAACGAAGGCTTCGTCGGCGGCGGTCAGATCGGCTACAACTACCAGTT
CACCCCGGGCTCCGGTGTCGTGATCGGTGTCGAGGCCGACGCCCAGTACGCCGATTTCGGCCGTGACCGGAACCGCTTCC
TCTCGACCAGCCCGCTGGCCGCCCAGCAGGTGTTCAATCCGGGTGGTCTGTCCGGCCTCGACTTCTTCGGCACCGTCCGC
GGTCGCCTCGGCTACGCCTTCGACCGCACCCTCGTGTACGGCACCGGCGGCTTCGCCTACGGCTCCGGCGGCGGTCGTGA
GTTCGGCACCGGCGTGTCGAGCAACGACTTCCAGACCGGCTGGGCCGCCGGTGGTGGTATCGAGTACGCTCTCCCGACCG
ACTCGTTCCTGAACTTCTTCAAGTCGTCGGCCGTGACGCTGAAGGTCGAAGGTCTGTACGTGAACCTCGACCGCGGCACC
GGCGGCCGTGGCGCCTTCGCGACGGACAACCAGGGCCGTACGGTCTCCATCGGCAGCCCGGGCACCGTGCTCGTCAGCGG
TGGCCAGCAGGTCCGCGACACCGAGTTCGCCGTCGTCCGCGCCGGCCTGAACTACAAGTTCGGCTCGTACTAG

Upstream 100 bases:

>100_bases
CAAGCCGCAACAGCATCTTCCGAGATGCTGGCATAGATACGGGGCACCGTGCCGCCTCGCTTCTTCGGAAGCATCGGTAC
AGTCAGAGAGGACCAGAGTA

Downstream 100 bases:

>100_bases
TATCCGGATCCCCGGCGGTCCCTTACCGGACCGCCGGACCTCCTGTGAAAAAGCCCGGCTTCGTGCCGGGCTTTTTTTAT
GGCCGTTCGGCGCACCGTCG

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MKSFLRAGTAIAGIAFAGSALAADLPRRAAPPPVFQPVPVFTWTGFYAGFNAGYGFGTQDDRVPTVIGVGPASLLVPPGT
TAVVAFSNRESNEGFVGGGQIGYNYQFTPGSGVVIGVEADAQYADFGRDRNRFLSTSPLAAQQVFNPGGLSGLDFFGTVR
GRLGYAFDRTLVYGTGGFAYGSGGGREFGTGVSSNDFQTGWAAGGGIEYALPTDSFLNFFKSSAVTLKVEGLYVNLDRGT
GGRGAFATDNQGRTVSIGSPGTVLVSGGQQVRDTEFAVVRAGLNYKFGSY

Sequences:

>Translated_290_residues
MKSFLRAGTAIAGIAFAGSALAADLPRRAAPPPVFQPVPVFTWTGFYAGFNAGYGFGTQDDRVPTVIGVGPASLLVPPGT
TAVVAFSNRESNEGFVGGGQIGYNYQFTPGSGVVIGVEADAQYADFGRDRNRFLSTSPLAAQQVFNPGGLSGLDFFGTVR
GRLGYAFDRTLVYGTGGFAYGSGGGREFGTGVSSNDFQTGWAAGGGIEYALPTDSFLNFFKSSAVTLKVEGLYVNLDRGT
GGRGAFATDNQGRTVSIGSPGTVLVSGGQQVRDTEFAVVRAGLNYKFGSY
>Mature_290_residues
MKSFLRAGTAIAGIAFAGSALAADLPRRAAPPPVFQPVPVFTWTGFYAGFNAGYGFGTQDDRVPTVIGVGPASLLVPPGT
TAVVAFSNRESNEGFVGGGQIGYNYQFTPGSGVVIGVEADAQYADFGRDRNRFLSTSPLAAQQVFNPGGLSGLDFFGTVR
GRLGYAFDRTLVYGTGGFAYGSGGGREFGTGVSSNDFQTGWAAGGGIEYALPTDSFLNFFKSSAVTLKVEGLYVNLDRGT
GGRGAFATDNQGRTVSIGSPGTVLVSGGQQVRDTEFAVVRAGLNYKFGSY

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 30075; Mature: 30075

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFLRAGTAIAGIAFAGSALAADLPRRAAPPPVFQPVPVFTWTGFYAGFNAGYGFGTQD
CCHHHHHCCHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
DRVPTVIGVGPASLLVPPGTTAVVAFSNRESNEGFVGGGQIGYNYQFTPGSGVVIGVEAD
CCCCEEEEECCHHEEECCCCEEEEEEECCCCCCCEEECCEECEEEEECCCCCEEEEEECC
AQYADFGRDRNRFLSTSPLAAQQVFNPGGLSGLDFFGTVRGRLGYAFDRTLVYGTGGFAY
CCHHHCCCCCCCEECCCCHHHHHHCCCCCCCCCHHHHHHHHHCCEEECCEEEEECCCEEE
GSGGGREFGTGVSSNDFQTGWAAGGGIEYALPTDSFLNFFKSSAVTLKVEGLYVNLDRGT
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCEEEEEEEEEEEEEECCC
GGRGAFATDNQGRTVSIGSPGTVLVSGGQQVRDTEFAVVRAGLNYKFGSY
CCCCCEEECCCCCEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MKSFLRAGTAIAGIAFAGSALAADLPRRAAPPPVFQPVPVFTWTGFYAGFNAGYGFGTQD
CCHHHHHCCHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
DRVPTVIGVGPASLLVPPGTTAVVAFSNRESNEGFVGGGQIGYNYQFTPGSGVVIGVEAD
CCCCEEEEECCHHEEECCCCEEEEEEECCCCCCCEEECCEECEEEEECCCCCEEEEEECC
AQYADFGRDRNRFLSTSPLAAQQVFNPGGLSGLDFFGTVRGRLGYAFDRTLVYGTGGFAY
CCHHHCCCCCCCEECCCCHHHHHHCCCCCCCCCHHHHHHHHHCCEEECCEEEEECCCEEE
GSGGGREFGTGVSSNDFQTGWAAGGGIEYALPTDSFLNFFKSSAVTLKVEGLYVNLDRGT
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCEEEEEEEEEEEEEECCC
GGRGAFATDNQGRTVSIGSPGTVLVSGGQQVRDTEFAVVRAGLNYKFGSY
CCCCCEEECCCCCEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]