| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is ttuD [H]
Identifier: 218530924
GI number: 218530924
Start: 3136927
End: 3138240
Strand: Reverse
Name: ttuD [H]
Synonym: Mchl_2974
Alternate gene names: 218530924
Gene position: 3138240-3136927 (Counterclockwise)
Preceding gene: 218530928
Following gene: 218530923
Centisome position: 54.31
GC content: 71.46
Gene sequence:
>1314_bases ATGACCGCCCCTGCCCCGACCGATCCGGCCCACGCGGAGCGTCGCGCCCTCCTTTCGTCGATCCTCGATGAGGCGATCGC CGCCGCCCATCCGCGCAAGTGCCTCGTCGGGCACCTGCCGGCCCCGACGCCGGGGCGGCTGATCATTCTCGGTGCGGGCA AGGCCGGCGGCAGCATGGCCGCGGTGGCGAGCAAGTTTTACCGCCAGGAGCACGGAGTGCCGGAGGACCGGATCGTCGGT CTCGCCGTGGCCCGGCACGGTTACGGCGAGGAGGCTCCCGGCATTCGCATGGTCGAGGCCGGCCACCCGGTTCCCGATGC GGCCGGCATCGAGGCGACCAAGGAAGCCCTCGCCATCGCCGCGAGCGCGGGCCCGGAGGACGAGGTCCTGGTACTGCTCT CCGGCGGCGGCTCGGCGAACTGGATCGCGCCTGCCGGCAACCTGACGCTCGCGGAGAAGCAGGCGATCACCAAGGCTTTG CTGCGCTCGGGTGCGCCGATCAACGAGATCAACGCCGTGCGCAAGCACCTCTCGCGCATCAAGGGCGGCCGGCTCGCAAT GGCGGCACGCAACGCCAAGTCGATTCTGACCCTCGCCATCTCCGACGTGCCGCATGACGATCCGTCCGTGATCGCCTCCG GCCCGACCGTGCCCGATCCCTCGACCCTGGCCGATGCCCGCGCGATCTGCGAACGCCGCGGCATCAGCCTGCCCGAATCC GCGCTCGCCCTGCTGAACGATCCGGCCAACGAGACGCCGAAGGCGGGCGATCCGGCCTTCGCCCGGGCCGAGTACCGCAT CATCGCCCGGCCGATCGACGCGCTCGAAGCGGCGGCCGAGGCCGCCCGGCGGGCCGGCTACGAGCCGGTGATGCTGGGCT CCGATCTTGAGGGCGAGGCCCGCGAGGTCGCGGCCGAACATGCCCGGCTGGCGCTCGAGGCGCGGCAGGCGGGGCGTCGC GTCGCCCTGATCTCCGGCGGCGAACTCACCGTCACCATTCGCGGCGAAGGCGATGGCGGCCCCAATCAGGAATATGCGCT GGCGCTCGCCATCGCGCTCGATGGAGCCGAGGGCATCGCCGGCATCGCCGCCGATACCGACGGCACCGATGGCGGGCGCG GCGCGGCGACCGACCCCGCGGGCGGCTTGGTCGACGCCACGACGCTGACCCGCGCCGAGGCTGCAGGGCTCGATCCGAAA GCGATGCTGCTCGACAACGATTCGACGCGATTCTTCGCGACAACCGGCGATCTCGTTCAGCCGGGCCCTACTCGGACCAA TGTCAACGATTGCCGCGTCATCCTCGTCGGTTGA
Upstream 100 bases:
>100_bases ACCCGAAAGTTTTGTGAAACCGCGAAGGCTTGCCGACACGGCAGCGCTCGGGCAAGCAAACGCACAAACAAGAACCGTCA AGACCCGCGCGAGGACGCCC
Downstream 100 bases:
>100_bases GTTCCTGACAGCATCGTCCCAAAAGGCGGCCACCGGCTTTTGGAAGAAGACGATGCAGAAACTAGCGAGAGCGCGCTCGC GGCGCAGGGCCGTCCTCGGG
Product: hydroxypyruvate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MTAPAPTDPAHAERRALLSSILDEAIAAAHPRKCLVGHLPAPTPGRLIILGAGKAGGSMAAVASKFYRQEHGVPEDRIVG LAVARHGYGEEAPGIRMVEAGHPVPDAAGIEATKEALAIAASAGPEDEVLVLLSGGGSANWIAPAGNLTLAEKQAITKAL LRSGAPINEINAVRKHLSRIKGGRLAMAARNAKSILTLAISDVPHDDPSVIASGPTVPDPSTLADARAICERRGISLPES ALALLNDPANETPKAGDPAFARAEYRIIARPIDALEAAAEAARRAGYEPVMLGSDLEGEAREVAAEHARLALEARQAGRR VALISGGELTVTIRGEGDGGPNQEYALALAIALDGAEGIAGIAADTDGTDGGRGAATDPAGGLVDATTLTRAEAAGLDPK AMLLDNDSTRFFATTGDLVQPGPTRTNVNDCRVILVG
Sequences:
>Translated_437_residues MTAPAPTDPAHAERRALLSSILDEAIAAAHPRKCLVGHLPAPTPGRLIILGAGKAGGSMAAVASKFYRQEHGVPEDRIVG LAVARHGYGEEAPGIRMVEAGHPVPDAAGIEATKEALAIAASAGPEDEVLVLLSGGGSANWIAPAGNLTLAEKQAITKAL LRSGAPINEINAVRKHLSRIKGGRLAMAARNAKSILTLAISDVPHDDPSVIASGPTVPDPSTLADARAICERRGISLPES ALALLNDPANETPKAGDPAFARAEYRIIARPIDALEAAAEAARRAGYEPVMLGSDLEGEAREVAAEHARLALEARQAGRR VALISGGELTVTIRGEGDGGPNQEYALALAIALDGAEGIAGIAADTDGTDGGRGAATDPAGGLVDATTLTRAEAAGLDPK AMLLDNDSTRFFATTGDLVQPGPTRTNVNDCRVILVG >Mature_436_residues TAPAPTDPAHAERRALLSSILDEAIAAAHPRKCLVGHLPAPTPGRLIILGAGKAGGSMAAVASKFYRQEHGVPEDRIVGL AVARHGYGEEAPGIRMVEAGHPVPDAAGIEATKEALAIAASAGPEDEVLVLLSGGGSANWIAPAGNLTLAEKQAITKALL RSGAPINEINAVRKHLSRIKGGRLAMAARNAKSILTLAISDVPHDDPSVIASGPTVPDPSTLADARAICERRGISLPESA LALLNDPANETPKAGDPAFARAEYRIIARPIDALEAAAEAARRAGYEPVMLGSDLEGEAREVAAEHARLALEARQAGRRV ALISGGELTVTIRGEGDGGPNQEYALALAIALDGAEGIAGIAADTDGTDGGRGAATDPAGGLVDATTLTRAEAAGLDPKA MLLDNDSTRFFATTGDLVQPGPTRTNVNDCRVILVG
Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]
COG id: COG2379
COG function: function code G; Putative glycerate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI31543063, Length=382, Percent_Identity=33.2460732984293, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI193205461, Length=360, Percent_Identity=30.5555555555556, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI19920578, Length=399, Percent_Identity=30.5764411027569, Blast_Score=127, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007835 [H]
Pfam domain/function: PF05161 MOFRL [H]
EC number: =1.1.1.81 [H]
Molecular weight: Translated: 44644; Mature: 44513
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPAPTDPAHAERRALLSSILDEAIAAAHPRKCLVGHLPAPTPGRLIILGAGKAGGSMA CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCEEEEEECCCCCCHHH AVASKFYRQEHGVPEDRIVGLAVARHGYGEEAPGIRMVEAGHPVPDAAGIEATKEALAIA HHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHEEE ASAGPEDEVLVLLSGGGSANWIAPAGNLTLAEKQAITKALLRSGAPINEINAVRKHLSRI ECCCCCCCEEEEEECCCCCCEECCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC KGGRLAMAARNAKSILTLAISDVPHDDPSVIASGPTVPDPSTLADARAICERRGISLPES CCCEEEEECCCCCEEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCHH ALALLNDPANETPKAGDPAFARAEYRIIARPIDALEAAAEAARRAGYEPVMLGSDLEGEA HHHHHCCCCCCCCCCCCCCHHHCCEEEEECCHHHHHHHHHHHHHCCCCCEEECCCCCCHH REVAAEHARLALEARQAGRRVALISGGELTVTIRGEGDGGPNQEYALALAIALDGAEGIA HHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCE GIAADTDGTDGGRGAATDPAGGLVDATTLTRAEAAGLDPKAMLLDNDSTRFFATTGDLVQ EEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCC PGPTRTNVNDCRVILVG CCCCCCCCCCCEEEEEC >Mature Secondary Structure TAPAPTDPAHAERRALLSSILDEAIAAAHPRKCLVGHLPAPTPGRLIILGAGKAGGSMA CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCEEEEEECCCCCCHHH AVASKFYRQEHGVPEDRIVGLAVARHGYGEEAPGIRMVEAGHPVPDAAGIEATKEALAIA HHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHEEE ASAGPEDEVLVLLSGGGSANWIAPAGNLTLAEKQAITKALLRSGAPINEINAVRKHLSRI ECCCCCCCEEEEEECCCCCCEECCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC KGGRLAMAARNAKSILTLAISDVPHDDPSVIASGPTVPDPSTLADARAICERRGISLPES CCCEEEEECCCCCEEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCHH ALALLNDPANETPKAGDPAFARAEYRIIARPIDALEAAAEAARRAGYEPVMLGSDLEGEA HHHHHCCCCCCCCCCCCCCHHHCCEEEEECCHHHHHHHHHHHHHCCCCCEEECCCCCCHH REVAAEHARLALEARQAGRRVALISGGELTVTIRGEGDGGPNQEYALALAIALDGAEGIA HHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCE GIAADTDGTDGGRGAATDPAGGLVDATTLTRAEAAGLDPKAMLLDNDSTRFFATTGDLVQ EEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCC PGPTRTNVNDCRVILVG CCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7592429 [H]