| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218711003
Identifier: 218711003
GI number: 218711003
Start: 3267765
End: 3268319
Strand: Direct
Name: 218711003
Synonym: VS_3132
Alternate gene names: NA
Gene position: 3267765-3268319 (Clockwise)
Preceding gene: 218711002
Following gene: 218711006
Centisome position: 99.04
GC content: 44.14
Gene sequence:
>555_bases ATGAAATCATACGTACTTCTCGCTAGCGCATTGCTCGCAAACTCAGTATTCGTAAGTTCTGCCTTTGCTGATCAAATGGT CACATTGTCTGATGGTAAGCAAGTGTTACTAAAAGACGATTTTACTTGGCAGTATGTGAGTAACGCATCATCGAATGCAG AGTCAGCATTGACGAGTATTCCTGTAGCCAAAAACACACGCGGTACCACAATCAAGATTGGAGACACCAAGCCAAGCTTG CAGCTTTCCAAATCAGGTGTGGACGTTTTGATTGGGGCAGGACTCTACGAGAATGAACAGCTAATCTTACCAATTTCAGT CACTAACCAAAGCACAGAAGCCGTCGTGCTAGTTACGCTAAATATCACTGTCTACTCACCAACGGGTGAGCTGCTGCATC AAGGCAGTATCAACACTTGGCAATCCATTAAGCGCCTTGCTGATACCTACCTTCGACCACAAACTTCGGCAGAAGGTAAA TACTTAGCGATCGATGTTGATAAGTATCCTGAATATAAAATAGACGTGGAGATCACTGACGTTTCTACCCGTTAG
Upstream 100 bases:
>100_bases TAGGCATGTTGATGGGCCGACTTGAGATACTAACGCTCATTGTTCTATTTTTCCCAGCCTTTTGGCGACGCTAATTACGC GAATATTTAAGGAAACACAG
Downstream 100 bases:
>100_bases GGGCATACCGGTTCAATCAAAACTAAACCGGTGTCACAAACAGATAGATAGCGAAGAAATGGCAAGCGCAGCCCGCCAAT ACAAACAAGTGCCAGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MKSYVLLASALLANSVFVSSAFADQMVTLSDGKQVLLKDDFTWQYVSNASSNAESALTSIPVAKNTRGTTIKIGDTKPSL QLSKSGVDVLIGAGLYENEQLILPISVTNQSTEAVVLVTLNITVYSPTGELLHQGSINTWQSIKRLADTYLRPQTSAEGK YLAIDVDKYPEYKIDVEITDVSTR
Sequences:
>Translated_184_residues MKSYVLLASALLANSVFVSSAFADQMVTLSDGKQVLLKDDFTWQYVSNASSNAESALTSIPVAKNTRGTTIKIGDTKPSL QLSKSGVDVLIGAGLYENEQLILPISVTNQSTEAVVLVTLNITVYSPTGELLHQGSINTWQSIKRLADTYLRPQTSAEGK YLAIDVDKYPEYKIDVEITDVSTR >Mature_184_residues MKSYVLLASALLANSVFVSSAFADQMVTLSDGKQVLLKDDFTWQYVSNASSNAESALTSIPVAKNTRGTTIKIGDTKPSL QLSKSGVDVLIGAGLYENEQLILPISVTNQSTEAVVLVTLNITVYSPTGELLHQGSINTWQSIKRLADTYLRPQTSAEGK YLAIDVDKYPEYKIDVEITDVSTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19995; Mature: 19995
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSYVLLASALLANSVFVSSAFADQMVTLSDGKQVLLKDDFTWQYVSNASSNAESALTSI CCCHHHHHHHHHHHHHHEEHHHHHCEEEECCCCEEEEECCCEEEEECCCCCCCHHHHHCC PVAKNTRGTTIKIGDTKPSLQLSKSGVDVLIGAGLYENEQLILPISVTNQSTEAVVLVTL CCCCCCCCCEEEECCCCCCEEEECCCCEEEEECCEECCCEEEEEEEECCCCCCEEEEEEE NITVYSPTGELLHQGSINTWQSIKRLADTYLRPQTSAEGKYLAIDVDKYPEYKIDVEITD EEEEECCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEEEE VSTR CCCC >Mature Secondary Structure MKSYVLLASALLANSVFVSSAFADQMVTLSDGKQVLLKDDFTWQYVSNASSNAESALTSI CCCHHHHHHHHHHHHHHEEHHHHHCEEEECCCCEEEEECCCEEEEECCCCCCCHHHHHCC PVAKNTRGTTIKIGDTKPSLQLSKSGVDVLIGAGLYENEQLILPISVTNQSTEAVVLVTL CCCCCCCCCEEEECCCCCCEEEECCCCEEEEECCEECCCEEEEEEEECCCCCCEEEEEEE NITVYSPTGELLHQGSINTWQSIKRLADTYLRPQTSAEGKYLAIDVDKYPEYKIDVEITD EEEEECCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEEEE VSTR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA