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The map label for this gene is yrdB [C]

Identifier: 218710988

GI number: 218710988

Start: 3253817

End: 3254086

Strand: Reverse

Name: yrdB [C]

Synonym: VS_3116

Alternate gene names: 218710988

Gene position: 3254086-3253817 (Counterclockwise)

Preceding gene: 218710989

Following gene: 218710986

Centisome position: 98.63

GC content: 38.15

Gene sequence:

>270_bases
ATGAATCAATCAATTATATTTCCTGATATCCAAGATTGGGATGAAGAGAATCAATCAATCACCTTCCCAGCACAACAGTC
GGGCGCATTGATTGAATGTGTCATGTCTATTGAAGAATTATCACGATTGGCAGGTAAAGAGATAAAAGAGGGCGATCAAG
CTTTAGTTATCTTTTCTGAGTTACGTTTCGATATTGAAGAGCTAGCGGAAGAGTTAATAGAAGAAGAGGAGTATGACTCC
TCTAATCGGATTCAGATCAAAGTGCTTTAG

Upstream 100 bases:

>100_bases
CAGAGAGCTTTATGCTTTGGCGTGGTCTTCGTCCGGGAACAAAACAGATTTTAAGAGAATTACGTAAAAACCTAGAGATG
TAATGAGGTATTTATAAAAA

Downstream 100 bases:

>100_bases
ACTGGCAACACAGAGTCTAGGTAGTCGTTTTTATTCTGAACATAGTTGTCAGCTGACTTCTGTAAAAAGGCACGCTCTTT
ATCATTTAATGGGCGTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MNQSIIFPDIQDWDEENQSITFPAQQSGALIECVMSIEELSRLAGKEIKEGDQALVIFSELRFDIEELAEELIEEEEYDS
SNRIQIKVL

Sequences:

>Translated_89_residues
MNQSIIFPDIQDWDEENQSITFPAQQSGALIECVMSIEELSRLAGKEIKEGDQALVIFSELRFDIEELAEELIEEEEYDS
SNRIQIKVL
>Mature_89_residues
MNQSIIFPDIQDWDEENQSITFPAQQSGALIECVMSIEELSRLAGKEIKEGDQALVIFSELRFDIEELAEELIEEEEYDS
SNRIQIKVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789674, Length=87, Percent_Identity=37.9310344827586, Blast_Score=60, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10250; Mature: 10250

Theoretical pI: Translated: 3.66; Mature: 3.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQSIIFPDIQDWDEENQSITFPAQQSGALIECVMSIEELSRLAGKEIKEGDQALVIFSE
CCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHH
LRFDIEELAEELIEEEEYDSSNRIQIKVL
HCCCHHHHHHHHHHHHCCCCCCCEEEEEC
>Mature Secondary Structure
MNQSIIFPDIQDWDEENQSITFPAQQSGALIECVMSIEELSRLAGKEIKEGDQALVIFSE
CCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHH
LRFDIEELAEELIEEEEYDSSNRIQIKVL
HCCCHHHHHHHHHHHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA