| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is crcB [H]
Identifier: 218710985
GI number: 218710985
Start: 3244679
End: 3245074
Strand: Reverse
Name: crcB [H]
Synonym: VS_3100
Alternate gene names: 218710985
Gene position: 3245074-3244679 (Counterclockwise)
Preceding gene: 218710986
Following gene: 218710984
Centisome position: 98.36
GC content: 43.43
Gene sequence:
>396_bases TTGGGAGGGTTCATGGGTCAGTTATCTATTTTAGGTTTTATTGCCATTGGTGGCGCATTTGGTGCTTGTTCGCGCTATTT GATTTCAGAGTTATGTGTGGTGATGCTAGGGCGTGGTTTTCCTTATGGTACGCTAACTGTTAACGTGATTGGCTCTTTAA TTATGGGCTTACTCATCGCAGCGTTTGAGAATGAGATGGTTGCGACAGAACCATGGAGACAAATTATCGGTCTTGGCTTC CTTGGAGCACTGACTACATTTTCTACATTTTCGATGGATAACGTGCTTCTTATGCAGCAGGGTGCTTTCTTTAAGATGGG ACTCAATGTGCTACTTAACGTGGTTCTCAGCATCTCAGCAGCATGGATCGGCTTCCAACTTTTGATAAAGTCTTAA
Upstream 100 bases:
>100_bases GAAGTTAAGTGACACCTGTAACGTTTAATATTTGCGCATGCATTCTTAGTTTCTACCCTCGCTTTTATCGGCGTTAAAGC TAGAATATAGGGATTATTGT
Downstream 100 bases:
>100_bases AACTTTCTTACGATTTGTTAACAACTCGGCTTGGTTTATCCAAGCCGTTTTTATATACTCGATCGAACTTGTCGGAGTGC CATATGGCTGAGACCGTTAA
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MGGFMGQLSILGFIAIGGAFGACSRYLISELCVVMLGRGFPYGTLTVNVIGSLIMGLLIAAFENEMVATEPWRQIIGLGF LGALTTFSTFSMDNVLLMQQGAFFKMGLNVLLNVVLSISAAWIGFQLLIKS
Sequences:
>Translated_131_residues MGGFMGQLSILGFIAIGGAFGACSRYLISELCVVMLGRGFPYGTLTVNVIGSLIMGLLIAAFENEMVATEPWRQIIGLGF LGALTTFSTFSMDNVLLMQQGAFFKMGLNVLLNVVLSISAAWIGFQLLIKS >Mature_130_residues GGFMGQLSILGFIAIGGAFGACSRYLISELCVVMLGRGFPYGTLTVNVIGSLIMGLLIAAFENEMVATEPWRQIIGLGFL GALTTFSTFSMDNVLLMQQGAFFKMGLNVLLNVVLSISAAWIGFQLLIKS
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
Organism=Escherichia coli, GI1786842, Length=117, Percent_Identity=41.025641025641, Blast_Score=70, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 13995; Mature: 13864
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGFMGQLSILGFIAIGGAFGACSRYLISELCVVMLGRGFPYGTLTVNVIGSLIMGLLIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH AFENEMVATEPWRQIIGLGFLGALTTFSTFSMDNVLLMQQGAFFKMGLNVLLNVVLSISA HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHH AWIGFQLLIKS HHHHHHHHCCC >Mature Secondary Structure GGFMGQLSILGFIAIGGAFGACSRYLISELCVVMLGRGFPYGTLTVNVIGSLIMGLLIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH AFENEMVATEPWRQIIGLGFLGALTTFSTFSMDNVLLMQQGAFFKMGLNVLLNVVLSISA HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHH AWIGFQLLIKS HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA