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The map label for this gene is 218710974

Identifier: 218710974

GI number: 218710974

Start: 3233033

End: 3233491

Strand: Direct

Name: 218710974

Synonym: VS_3088

Alternate gene names: NA

Gene position: 3233033-3233491 (Clockwise)

Preceding gene: 218710973

Following gene: 218710977

Centisome position: 97.99

GC content: 44.88

Gene sequence:

>459_bases
ATGGATAACAACACAGTCACGAACATGATGGCTCAATACGACAGTTTGATTGAGAAATCACAGGCACTTTTTGTTCCCGT
ACTACTTCTGTTTTGTCGCCTATGGGTGGCGTGGGTCTTCTTTAATTCAGGACTCACCAAAATAGCCACTTGGGATAGCA
CCCTTTACTTGTTTGAATTGGAATACCAAGTGCCTCTTTTGCCTTGGGAATTGGCCGCTTACATGGGTACCGCAGCTGAA
TTGATTCTGCCGGTATTCTTAGCGCTTGGCTTGTTAACCCGACCAATGGCTGCAGTGCTGTTCGTTTTCAATATCATGGC
CGTCGTGTCATACCCTGTATTGTGGGCGCAAGGCTTCTATGATCATCAGCTTTGGGGATTAATGATTCTTATCGTCGTGG
TATGGGGAGCTGGACCATTTTCACTTGATAGAATCTTAAAAGCGCAGTTCAAAAACTAA

Upstream 100 bases:

>100_bases
CTCTCAGCGATAGACCCTTTACTACTACAACATCTGAATACTGTCATGACACTGAACGTCATCTCAGGCTTTTCAATCAA
TGCCGAATTGGAGACATAAT

Downstream 100 bases:

>100_bases
ACCTCTTTTCCATGGTCTCTAAATTTACATAGGTCCAAAACGCAAAAAACCACTCAATTGAGTGGTTTCTTTTTAACTGG
GATAAACTACTTATTCAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; DoxD Family Protein; NADH Dehydrogenase; ThiosulphateQuinone Oxidoreductase

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MDNNTVTNMMAQYDSLIEKSQALFVPVLLLFCRLWVAWVFFNSGLTKIATWDSTLYLFELEYQVPLLPWELAAYMGTAAE
LILPVFLALGLLTRPMAAVLFVFNIMAVVSYPVLWAQGFYDHQLWGLMILIVVVWGAGPFSLDRILKAQFKN

Sequences:

>Translated_152_residues
MDNNTVTNMMAQYDSLIEKSQALFVPVLLLFCRLWVAWVFFNSGLTKIATWDSTLYLFELEYQVPLLPWELAAYMGTAAE
LILPVFLALGLLTRPMAAVLFVFNIMAVVSYPVLWAQGFYDHQLWGLMILIVVVWGAGPFSLDRILKAQFKN
>Mature_152_residues
MDNNTVTNMMAQYDSLIEKSQALFVPVLLLFCRLWVAWVFFNSGLTKIATWDSTLYLFELEYQVPLLPWELAAYMGTAAE
LILPVFLALGLLTRPMAAVLFVFNIMAVVSYPVLWAQGFYDHQLWGLMILIVVVWGAGPFSLDRILKAQFKN

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17331; Mature: 17331

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNNTVTNMMAQYDSLIEKSQALFVPVLLLFCRLWVAWVFFNSGLTKIATWDSTLYLFEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEE
EYQVPLLPWELAAYMGTAAELILPVFLALGLLTRPMAAVLFVFNIMAVVSYPVLWAQGFY
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DHQLWGLMILIVVVWGAGPFSLDRILKAQFKN
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MDNNTVTNMMAQYDSLIEKSQALFVPVLLLFCRLWVAWVFFNSGLTKIATWDSTLYLFEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEE
EYQVPLLPWELAAYMGTAAELILPVFLALGLLTRPMAAVLFVFNIMAVVSYPVLWAQGFY
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DHQLWGLMILIVVVWGAGPFSLDRILKAQFKN
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA