| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is paaE [C]
Identifier: 218710954
GI number: 218710954
Start: 3211366
End: 3211656
Strand: Reverse
Name: paaE [C]
Synonym: VS_3068
Alternate gene names: 218710954
Gene position: 3211656-3211366 (Counterclockwise)
Preceding gene: 218710955
Following gene: 218710953
Centisome position: 97.34
GC content: 40.89
Gene sequence:
>291_bases TTGGGAACAACTAGGAATCTCATGAGCTTCCAAGTAATCTTATACCCAGAAATTATCAGTTTTACCGTAGAAAAAGGGCA AACGGTTTTGGATGCTGCGCTCAACAGCAATATCAATTTTCCAAACCGTTGCCAAGTTGGTGCATGCGCTATGTGCATGT GCAAAAAATTAGAAGGCCAAGTGAGTTACCACCTTGAACCCATGCTCACAGAGAAAGAGCAGTTACAAGGTTGGATTTTT GCTTGCCAAGCATTTGCAGAAAGTAATTTAGTTCTAACCTTTGCCGATTAA
Upstream 100 bases:
>100_bases TGGGTCTAGATGCGACGAACAAGTTTGAAGGTGAATGCCTACGAGAGTGGGGTGTTCCAATCACCAAGGATCCAGATGTC GTTAAAAAGATTGATAGCAT
Downstream 100 bases:
>100_bases GGGTTAGTGAGAGGAAGAACATGACTATTAAATGTAAAGTGAAATCTATCGAGCCATTAGCTTGTAACACTTACCAAATC CGACTACACCCAGAAACACC
Product: putative ferredoxin
Products: NA
Alternate protein names: CDP-6-Deoxy-Delta-3 4-Glucoseen Reductase; Phenol Hydroxylase P5 Protein; Phenol Hydroxylase
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MGTTRNLMSFQVILYPEIISFTVEKGQTVLDAALNSNINFPNRCQVGACAMCMCKKLEGQVSYHLEPMLTEKEQLQGWIF ACQAFAESNLVLTFAD
Sequences:
>Translated_96_residues MGTTRNLMSFQVILYPEIISFTVEKGQTVLDAALNSNINFPNRCQVGACAMCMCKKLEGQVSYHLEPMLTEKEQLQGWIF ACQAFAESNLVLTFAD >Mature_95_residues GTTRNLMSFQVILYPEIISFTVEKGQTVLDAALNSNINFPNRCQVGACAMCMCKKLEGQVSYHLEPMLTEKEQLQGWIFA CQAFAESNLVLTFAD
Specific function: May Be Part Of A Multicomponent Oxygenase Involved In Phenylacetyl-CoA Hydroxylation. [C]
COG id: COG0633
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 10743; Mature: 10611
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 10.4 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTTRNLMSFQVILYPEIISFTVEKGQTVLDAALNSNINFPNRCQVGACAMCMCKKLEGQ CCCCCCCEEEEEEEEHHHHEEECCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC VSYHLEPMLTEKEQLQGWIFACQAFAESNLVLTFAD EEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure GTTRNLMSFQVILYPEIISFTVEKGQTVLDAALNSNINFPNRCQVGACAMCMCKKLEGQ CCCCCCEEEEEEEEHHHHEEECCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC VSYHLEPMLTEKEQLQGWIFACQAFAESNLVLTFAD EEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD [C]
Metal ions: Iron-Sulfur [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA