| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is yhhL [C]
Identifier: 218710921
GI number: 218710921
Start: 3170942
End: 3171208
Strand: Direct
Name: yhhL [C]
Synonym: VS_3024
Alternate gene names: 218710921
Gene position: 3170942-3171208 (Clockwise)
Preceding gene: 218710920
Following gene: 218710926
Centisome position: 96.11
GC content: 43.07
Gene sequence:
>267_bases ATGAAGTTCTTGCTTCCACTAGCAAAAGCAGCCATCGCCTTTGTTTGGTTTATCTTAATCGCCAATATTTTCTACCCATT CCCGGGTAATGCTGCGATTGCGCTTTATATCATGACAGCATTCTTATTCTTCATGCACGGCCTGCAGATGCTGATTTTCA TCGGTGCTTTTGGCGATAAGATCGAAATGTCACGTTGGGAGAAGTGGTCAATATTGATTTTCGGCGTCTTTGCCCTACTC GATATCCGACGTAAACACATGATGTAA
Upstream 100 bases:
>100_bases GAAGCTATGCCAGAAAACTGGGAATTACATCGCGATAAGACCACTGGCCAGTCGAGCTACCGACTGTTCAATCGAATCAC TGAAGAATAGGAGTTATTGA
Downstream 100 bases:
>100_bases TAAAGCTTAAGCTTAGATATAAAACGCTTAGCGACAGAAAACATCATGACAGAAACAATTGATACAAAAGCGCCGCTCAT TTGAGCGGCGTTTTTTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MKFLLPLAKAAIAFVWFILIANIFYPFPGNAAIALYIMTAFLFFMHGLQMLIFIGAFGDKIEMSRWEKWSILIFGVFALL DIRRKHMM
Sequences:
>Translated_88_residues MKFLLPLAKAAIAFVWFILIANIFYPFPGNAAIALYIMTAFLFFMHGLQMLIFIGAFGDKIEMSRWEKWSILIFGVFALL DIRRKHMM >Mature_88_residues MKFLLPLAKAAIAFVWFILIANIFYPFPGNAAIALYIMTAFLFFMHGLQMLIFIGAFGDKIEMSRWEKWSILIFGVFALL DIRRKHMM
Specific function: Unknown
COG id: COG3776
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10251; Mature: 10251
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.0 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 8.0 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLLPLAKAAIAFVWFILIANIFYPFPGNAAIALYIMTAFLFFMHGLQMLIFIGAFGDK CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IEMSRWEKWSILIFGVFALLDIRRKHMM HHHHHCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKFLLPLAKAAIAFVWFILIANIFYPFPGNAAIALYIMTAFLFFMHGLQMLIFIGAFGDK CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IEMSRWEKWSILIFGVFALLDIRRKHMM HHHHHCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA