| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710906
Identifier: 218710906
GI number: 218710906
Start: 3158245
End: 3158397
Strand: Reverse
Name: 218710906
Synonym: VS_3008
Alternate gene names: NA
Gene position: 3158397-3158245 (Counterclockwise)
Preceding gene: 218710908
Following gene: 218710905
Centisome position: 95.73
GC content: 39.87
Gene sequence:
>153_bases ATGGAAATAGTCATATTGCCGTTAAGTTTGTGGAAAATCATTCATCGACTGATTGAGTATAGGGTTAAAAATGACCAAAA AATCAAACACCGGATTCAAACGTATCGTCAAAGCGGCGGGCTTTTCATGGCAAGGCATCACGAGCTCGTTTAA
Upstream 100 bases:
>100_bases ATTTCTATAATGAGAGGATAAATCCTATGAGTGAAATAGGGATAAGCCTAGGCGTAAATTTAATCGATGCAAGAATACCA GAAACTGGTCTAACCTTTTA
Downstream 100 bases:
>100_bases AAACGAGGCTGCATTTCGACAAGAAGTCTTTATGGCCGCAGTGCTTATTCCGTTGGCGTTCTACTTAGATGTAAACCAAG TTGAGCGAATCTTAATGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 50; Mature: 50
Protein sequence:
>50_residues MEIVILPLSLWKIIHRLIEYRVKNDQKIKHRIQTYRQSGGLFMARHHELV
Sequences:
>Translated_50_residues MEIVILPLSLWKIIHRLIEYRVKNDQKIKHRIQTYRQSGGLFMARHHELV >Mature_50_residues MEIVILPLSLWKIIHRLIEYRVKNDQKIKHRIQTYRQSGGLFMARHHELV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6109; Mature: 6109
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIVILPLSLWKIIHRLIEYRVKNDQKIKHRIQTYRQSGGLFMARHHELV CEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCC >Mature Secondary Structure MEIVILPLSLWKIIHRLIEYRVKNDQKIKHRIQTYRQSGGLFMARHHELV CEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA