| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is arcC [H]
Identifier: 218710842
GI number: 218710842
Start: 3078770
End: 3079681
Strand: Direct
Name: arcC [H]
Synonym: VS_2925
Alternate gene names: 218710842
Gene position: 3078770-3079681 (Clockwise)
Preceding gene: 218710841
Following gene: 218710843
Centisome position: 93.32
GC content: 48.36
Gene sequence:
>912_bases ATGACTAAGCAAACTGTTGTTGTTGCACTCGGCGGTAATGCCCTACTTCGTCGCGGTGAGCCGTTAGAAGCCGATGTTCA ACGCCGTAATATTGAAACGGCTGTTAAAACCATCTCTGAAATCGCGAAAGTGTACAACGTGGTTCTAGTGCACGGTAATG GTCCACAAGTTGGCTTACTTGCTCTGCAAGGTTTGGAGTACAAAAAAGTAAACCCGTATCCATTGGATGTATTGGGCAGT GAGACTCAAGGCATGATCGGCTACATGCTGATGCAAGAGTTCAAAAACTACCTGCCTGACCGCAACATCTCATGCATGTT GACGCAAATGACCGTTGATCCAAACGATCCTGCATTCGCAGATCCAACTAAGCCAATTGGCCCGATCTACGAAGAAGCAG AAGCGCGTGAGTTAGCGGAGAAATTCCACTGGATCGTAAAACCAGACGGTCAACATTTCCGTCGAGTAGTGCCAAGCCCA CGCCCTACTGGCATTGTTGAACACGAAGCGATCACTCAACTTATCGATGCAGGTCACCTCGTAATTTGTACTGGCGGTGG TGGCATCCCAGTGAAAAAAGAAAATGGCAAATTAGTCGGCGTTGAAGCGGTTATCGACAAAGACATGTCAGCGGCTTTCT TGGCGAAACAATTGGATGCGGATGCACTACTTATTCTGACCGATGCTGACGCTGTTTATCTTGATTGGGGCAAACCGACT CAACACGCACTGCGCAGTACTACACCAAGTGAATTGGCGAAGTTTACATTTGATGCAGGCTCAATGGGGCCAAAAATCGA AGCATCGTGCGAGTTCATTCAGCAAGGCGGCAAAGTAGTGGGTATCGGCGCACTCGAAGATGGTTTGCAAATCCTGCAAG GCCAAGCGGGCACCAATATCACCAAAGGTTAA
Upstream 100 bases:
>100_bases CTGCCCAATTGAGCGTGATGGTATCTAATCACTAAGACGAAACGGCCAAGTTGAACGACCTTAAATAATCTCAACTTGGC CAAAATGAGAGAACACAATT
Downstream 100 bases:
>100_bases TGCACTAGCGAGCTTTATCATCTTGAGAGCCTTAAACCTTGAGAGCTTTTAAAGCTTGCGAAAACAGATTAAACGAAACA AACAAAACCGAACAACTTTA
Product: carbamate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTKQTVVVALGGNALLRRGEPLEADVQRRNIETAVKTISEIAKVYNVVLVHGNGPQVGLLALQGLEYKKVNPYPLDVLGS ETQGMIGYMLMQEFKNYLPDRNISCMLTQMTVDPNDPAFADPTKPIGPIYEEAEARELAEKFHWIVKPDGQHFRRVVPSP RPTGIVEHEAITQLIDAGHLVICTGGGGIPVKKENGKLVGVEAVIDKDMSAAFLAKQLDADALLILTDADAVYLDWGKPT QHALRSTTPSELAKFTFDAGSMGPKIEASCEFIQQGGKVVGIGALEDGLQILQGQAGTNITKG
Sequences:
>Translated_303_residues MTKQTVVVALGGNALLRRGEPLEADVQRRNIETAVKTISEIAKVYNVVLVHGNGPQVGLLALQGLEYKKVNPYPLDVLGS ETQGMIGYMLMQEFKNYLPDRNISCMLTQMTVDPNDPAFADPTKPIGPIYEEAEARELAEKFHWIVKPDGQHFRRVVPSP RPTGIVEHEAITQLIDAGHLVICTGGGGIPVKKENGKLVGVEAVIDKDMSAAFLAKQLDADALLILTDADAVYLDWGKPT QHALRSTTPSELAKFTFDAGSMGPKIEASCEFIQQGGKVVGIGALEDGLQILQGQAGTNITKG >Mature_302_residues TKQTVVVALGGNALLRRGEPLEADVQRRNIETAVKTISEIAKVYNVVLVHGNGPQVGLLALQGLEYKKVNPYPLDVLGSE TQGMIGYMLMQEFKNYLPDRNISCMLTQMTVDPNDPAFADPTKPIGPIYEEAEARELAEKFHWIVKPDGQHFRRVVPSPR PTGIVEHEAITQLIDAGHLVICTGGGGIPVKKENGKLVGVEAVIDKDMSAAFLAKQLDADALLILTDADAVYLDWGKPTQ HALRSTTPSELAKFTFDAGSMGPKIEASCEFIQQGGKVVGIGALEDGLQILQGQAGTNITKG
Specific function: Arginine degradation via arginine deiminase; third step. [C]
COG id: COG0549
COG function: function code E; Carbamate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbamate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786732, Length=298, Percent_Identity=52.3489932885906, Blast_Score=308, Evalue=2e-85, Organism=Escherichia coli, GI1789238, Length=315, Percent_Identity=38.0952380952381, Blast_Score=189, Evalue=2e-49, Organism=Escherichia coli, GI1786516, Length=314, Percent_Identity=38.8535031847134, Blast_Score=174, Evalue=9e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR003964 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.2.2 [H]
Molecular weight: Translated: 32682; Mature: 32551
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKQTVVVALGGNALLRRGEPLEADVQRRNIETAVKTISEIAKVYNVVLVHGNGPQVGLL CCCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEE ALQGLEYKKVNPYPLDVLGSETQGMIGYMLMQEFKNYLPDRNISCMLTQMTVDPNDPAFA EECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCC DPTKPIGPIYEEAEARELAEKFHWIVKPDGQHFRRVVPSPRPTGIVEHEAITQLIDAGHL CCCCCCCCHHHHHHHHHHHHHCCEEECCCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCE VICTGGGGIPVKKENGKLVGVEAVIDKDMSAAFLAKQLDADALLILTDADAVYLDWGKPT EEEECCCCCCEECCCCCEEEEHHHHCCCHHHHHHHHHCCCCEEEEEECCCEEEEECCCCH QHALRSTTPSELAKFTFDAGSMGPKIEASCEFIQQGGKVVGIGALEDGLQILQGQAGTNI HHHHHCCCHHHHHHEEECCCCCCCCCHHHHHHHHCCCCEEEECCHHHHHHHHCCCCCCCC TKG CCC >Mature Secondary Structure TKQTVVVALGGNALLRRGEPLEADVQRRNIETAVKTISEIAKVYNVVLVHGNGPQVGLL CCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEE ALQGLEYKKVNPYPLDVLGSETQGMIGYMLMQEFKNYLPDRNISCMLTQMTVDPNDPAFA EECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCC DPTKPIGPIYEEAEARELAEKFHWIVKPDGQHFRRVVPSPRPTGIVEHEAITQLIDAGHL CCCCCCCCHHHHHHHHHHHHHCCEEECCCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCE VICTGGGGIPVKKENGKLVGVEAVIDKDMSAAFLAKQLDADALLILTDADAVYLDWGKPT EEEECCCCCCEECCCCCEEEEHHHHCCCHHHHHHHHHCCCCEEEEEECCCEEEEECCCCH QHALRSTTPSELAKFTFDAGSMGPKIEASCEFIQQGGKVVGIGALEDGLQILQGQAGTNI HHHHHCCCHHHHHHEEECCCCCCCCCHHHHHHHHCCCCEEEECCHHHHHHHHCCCCCCCC TKG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2537202; 10984043 [H]