| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is cpxA [H]
Identifier: 218710834
GI number: 218710834
Start: 3068191
End: 3069570
Strand: Direct
Name: cpxA [H]
Synonym: VS_2917
Alternate gene names: 218710834
Gene position: 3068191-3069570 (Clockwise)
Preceding gene: 218710833
Following gene: 218710835
Centisome position: 93.0
GC content: 47.32
Gene sequence:
>1380_bases ATGCGTATCCCTAAAATCACCAGCTTATATGGACGTATCTTTGCTATCTTTTGGTTCACCATGTTACTGGTGCTTTTGTC GGTACTGTCACTTCCCCATTTAGACCCGCGAGTGGCGCGCGATGTGCCTGCCGATCATCTCGATAAACTCGAACGTATCG CTAAATTCACAGAAAAGCGCTACGCCAAAGAATCTAACCTGGGAAAAATAGTGTTCCAACTTGAGGCACCGCGTAGCCGC AAGGATTCTCGTGCTCGTATTTACCTAACCGACCTTGAAGGCGCGGTCCTTACATCGAAAAGACACTCAAATTACAAACT TAAAGCGATTCGTAATTTTGTTACCTCGATAGATAACCCTGAATTACCCAAGCAAAAGTTATACGGACATTACATGGTAG CAGGGCCAGTCCCTATCACACTCGCTGGAGAAGAATTACTGATGTATGCCGGAGTAAAATGGAACCAACCTCCTCCATTT TTGCTGCGCTTATTTGATAGACCTTTACAGTTATTGCTTGCGGTAATGCTAGCAAGTACCCCACTGCTATTATGGTTAGC TTGGGCATTGAGCCAACCTGCTCGTAGGCTTGAACGCGCAGCACAACGTGTGGCGAAAGGTCAGTTTGAGGTCGATCCCA CACTCGAAAAAGGCACCTCAGAATTCAGACAAGCGGGTGAGAGCTTTAACCAGATGGTCGAAGCGGTTAATCAGATGATT TCGGGGCAACAACGCCTACTTTCAGATATCTCACACGAGCTACGATCGCCATTGACCCGCCTTCGCATGGCCAATGCTCT TGCGATTCGTAAACAGGGTGAGAGCCAAGAGTTAGAACGTATTGATATGGAAGCTCAGCGATTAGAGCAAATGATCAGTG AGCTACTGACGCTATCACGCATGCAGGTCGACAGCCATATTACTCGTGAGGTTCAGCCTATTTCGAGCTTATGGGAAGAG ATTTTAAAAGATGCAGAATTTGAAGCTGAACAGATGGGTAAATTACTGACGTTTTCGGAGATCCCAGACCGTTCTATTTC GGGTAATCCTAAGCTGCTGATGAGTGCCTTGGACAATATTACGCGTAATGCCATCTATTACGGGAAAGACCAAGTCGATG TGCAATTCGATGTTGTCCAAGATCGGCTGACGATTTGCGTCAATGACAACGGTGATGGTGTACCTGATGATGAGCTGGAT TCAATCTTTAGGCCTTTCTACCGCGTTTCAACCGCTCGTGATCGTAACTCCGGCGGCACAGGGCTTGGCCTAACCATTAC AGAGAGTGCGATTCGTCAACACAGCGGAACCATCACTGCAAGCCGTAGCCAGCTCGGTGGATTACAACTCAAAATCACCC TGCCTATCCTGCCAGTGTAA
Upstream 100 bases:
>100_bases ACATATCCAACCTGCGTAAAAAAATTCCAGAACGCAGTGACGGTAAATCTCGCATCAAAACCTTACGAGGCCGTGGTTAC TTATTGGTAGAGGAAGATTA
Downstream 100 bases:
>100_bases TACCCCTACAAAGATCACAGTTGATAATGATTTCCATTATCATTATGGTAAGTCCTCTAATTAAGGAGGATTTACCATGT CACACTCTTTTCCTGCTCTA
Product: two-component sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MRIPKITSLYGRIFAIFWFTMLLVLLSVLSLPHLDPRVARDVPADHLDKLERIAKFTEKRYAKESNLGKIVFQLEAPRSR KDSRARIYLTDLEGAVLTSKRHSNYKLKAIRNFVTSIDNPELPKQKLYGHYMVAGPVPITLAGEELLMYAGVKWNQPPPF LLRLFDRPLQLLLAVMLASTPLLLWLAWALSQPARRLERAAQRVAKGQFEVDPTLEKGTSEFRQAGESFNQMVEAVNQMI SGQQRLLSDISHELRSPLTRLRMANALAIRKQGESQELERIDMEAQRLEQMISELLTLSRMQVDSHITREVQPISSLWEE ILKDAEFEAEQMGKLLTFSEIPDRSISGNPKLLMSALDNITRNAIYYGKDQVDVQFDVVQDRLTICVNDNGDGVPDDELD SIFRPFYRVSTARDRNSGGTGLGLTITESAIRQHSGTITASRSQLGGLQLKITLPILPV
Sequences:
>Translated_459_residues MRIPKITSLYGRIFAIFWFTMLLVLLSVLSLPHLDPRVARDVPADHLDKLERIAKFTEKRYAKESNLGKIVFQLEAPRSR KDSRARIYLTDLEGAVLTSKRHSNYKLKAIRNFVTSIDNPELPKQKLYGHYMVAGPVPITLAGEELLMYAGVKWNQPPPF LLRLFDRPLQLLLAVMLASTPLLLWLAWALSQPARRLERAAQRVAKGQFEVDPTLEKGTSEFRQAGESFNQMVEAVNQMI SGQQRLLSDISHELRSPLTRLRMANALAIRKQGESQELERIDMEAQRLEQMISELLTLSRMQVDSHITREVQPISSLWEE ILKDAEFEAEQMGKLLTFSEIPDRSISGNPKLLMSALDNITRNAIYYGKDQVDVQFDVVQDRLTICVNDNGDGVPDDELD SIFRPFYRVSTARDRNSGGTGLGLTITESAIRQHSGTITASRSQLGGLQLKITLPILPV >Mature_459_residues MRIPKITSLYGRIFAIFWFTMLLVLLSVLSLPHLDPRVARDVPADHLDKLERIAKFTEKRYAKESNLGKIVFQLEAPRSR KDSRARIYLTDLEGAVLTSKRHSNYKLKAIRNFVTSIDNPELPKQKLYGHYMVAGPVPITLAGEELLMYAGVKWNQPPPF LLRLFDRPLQLLLAVMLASTPLLLWLAWALSQPARRLERAAQRVAKGQFEVDPTLEKGTSEFRQAGESFNQMVEAVNQMI SGQQRLLSDISHELRSPLTRLRMANALAIRKQGESQELERIDMEAQRLEQMISELLTLSRMQVDSHITREVQPISSLWEE ILKDAEFEAEQMGKLLTFSEIPDRSISGNPKLLMSALDNITRNAIYYGKDQVDVQFDVVQDRLTICVNDNGDGVPDDELD SIFRPFYRVSTARDRNSGGTGLGLTITESAIRQHSGTITASRSQLGGLQLKITLPILPV
Specific function: This protein is involved in several diverse cellular processes, such as the functioning of acetohydroxyacid synthetase I, in the biosynthesis of isoleucine and valine, the TraJ protein activation activity for tra gene expression in F plasmid, and the synt
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790346, Length=465, Percent_Identity=45.5913978494624, Blast_Score=308, Evalue=3e-85, Organism=Escherichia coli, GI1787894, Length=312, Percent_Identity=32.0512820512821, Blast_Score=145, Evalue=7e-36, Organism=Escherichia coli, GI1789808, Length=290, Percent_Identity=30.6896551724138, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1786783, Length=273, Percent_Identity=29.3040293040293, Blast_Score=105, Evalue=5e-24, Organism=Escherichia coli, GI1788393, Length=278, Percent_Identity=29.136690647482, Blast_Score=102, Evalue=7e-23, Organism=Escherichia coli, GI87082128, Length=292, Percent_Identity=27.0547945205479, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1786600, Length=230, Percent_Identity=26.9565217391304, Blast_Score=99, Evalue=7e-22, Organism=Escherichia coli, GI1790861, Length=388, Percent_Identity=25, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI145693157, Length=254, Percent_Identity=28.3464566929134, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1787374, Length=287, Percent_Identity=24.0418118466899, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1790436, Length=221, Percent_Identity=28.9592760180996, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1789403, Length=241, Percent_Identity=29.045643153527, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1789149, Length=262, Percent_Identity=25.1908396946565, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI48994928, Length=229, Percent_Identity=27.5109170305677, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1786912, Length=220, Percent_Identity=27.7272727272727, Blast_Score=65, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 51948; Mature: 51948
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIPKITSLYGRIFAIFWFTMLLVLLSVLSLPHLDPRVARDVPADHLDKLERIAKFTEKR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH YAKESNLGKIVFQLEAPRSRKDSRARIYLTDLEGAVLTSKRHSNYKLKAIRNFVTSIDNP HHHHCCCCEEEEEEECCCCCCCCCCEEEEEECCCHHEECCCCCCHHHHHHHHHHHCCCCC ELPKQKLYGHYMVAGPVPITLAGEELLMYAGVKWNQPPPFLLRLFDRPLQLLLAVMLAST CCCHHHHCCCEEEECCEEEEECCCHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH PLLLWLAWALSQPARRLERAAQRVAKGQFEVDPTLEKGTSEFRQAGESFNQMVEAVNQMI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SGQQRLLSDISHELRSPLTRLRMANALAIRKQGESQELERIDMEAQRLEQMISELLTLSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MQVDSHITREVQPISSLWEEILKDAEFEAEQMGKLLTFSEIPDRSISGNPKLLMSALDNI HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHH TRNAIYYGKDQVDVQFDVVQDRLTICVNDNGDGVPDDELDSIFRPFYRVSTARDRNSGGT HHCCEEECCCCCCEEHEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC GLGLTITESAIRQHSGTITASRSQLGGLQLKITLPILPV CEEEEEEHHHHHHCCCCEEECHHHHCCEEEEEEECCCCC >Mature Secondary Structure MRIPKITSLYGRIFAIFWFTMLLVLLSVLSLPHLDPRVARDVPADHLDKLERIAKFTEKR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH YAKESNLGKIVFQLEAPRSRKDSRARIYLTDLEGAVLTSKRHSNYKLKAIRNFVTSIDNP HHHHCCCCEEEEEEECCCCCCCCCCEEEEEECCCHHEECCCCCCHHHHHHHHHHHCCCCC ELPKQKLYGHYMVAGPVPITLAGEELLMYAGVKWNQPPPFLLRLFDRPLQLLLAVMLAST CCCHHHHCCCEEEECCEEEEECCCHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH PLLLWLAWALSQPARRLERAAQRVAKGQFEVDPTLEKGTSEFRQAGESFNQMVEAVNQMI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SGQQRLLSDISHELRSPLTRLRMANALAIRKQGESQELERIDMEAQRLEQMISELLTLSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MQVDSHITREVQPISSLWEEILKDAEFEAEQMGKLLTFSEIPDRSISGNPKLLMSALDNI HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHH TRNAIYYGKDQVDVQFDVVQDRLTICVNDNGDGVPDDELDSIFRPFYRVSTARDRNSGGT HHCCEEECCCCCCEEHEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC GLGLTITESAIRQHSGTITASRSQLGGLQLKITLPILPV CEEEEEEHHHHHHCCCCEEECHHHHCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]