| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is pfkA [H]
Identifier: 218710830
GI number: 218710830
Start: 3064462
End: 3065430
Strand: Reverse
Name: pfkA [H]
Synonym: VS_2913
Alternate gene names: 218710830
Gene position: 3065430-3064462 (Counterclockwise)
Preceding gene: 218710831
Following gene: 218710827
Centisome position: 92.91
GC content: 47.27
Gene sequence:
>969_bases GTGAGCATGATTAAGAAGATCGGTGTTTTGACCAGTGGTGGTGACGCTCCAGGCATGAACGCAGCAGTTCGCGGTGTAGT TCGTACTGCGCTATCAGTTGGCATTGAAGTTTACGGCATTTACGACGGCTACCAAGGCCTTGTGGAAGACCGTATCGAAA AGCTTGACCGTTCAAGCGTATCTGACGTGATCAACCGTGGTGGTACTTTCTTAGGTTCTGCACGTTTCCCTGAGTTCAAA GACGTTGCTGTTCGTGAGAAAGGCATCGAGAACCTTAAGAAGCACGGTATCGAAGCACTTGTTGTTATCGGTGGTGACGG TTCTTACATGGGTGCTAAGAAACTGACTGAGATGGGTTACCCATGTATCGGTCTTCCTGGCACAATCGACAATGATATCG CGGGTACTGATTACACTATCGGTTACCTAACTGCGCTTAACACTGTTATCGATTCAATCGACCGTCTACGTGATACGTCT TCTTCTCACCAACGTATTTCTATTGTTGAAATCATGGGCCGTCACTGTGGTGACCTTACGCTTATGTCAGCAATCGCGGG TGGTTGTGAGTACATCATTACACCTGAGACTGGCCTAGATAAAGATCAGCTAATCAGCAATATTCAAGATGGTATTGCGA AAGGCAAGAAGCACGCAATTATCGCTCTAACTGAGCTAATGATGGACGCGAACGAATTGGCTAAAGAGATTGAAACGGCA ACAGGTCGTGAGACTCGCGCAACCGTTCTTGGTCACATTCAACGTGGTGGTCGTCCTACTGCATTTGACCGTGTTTTAGC TTCTCGTATGGGCAACTACGCCGTTCACCTTCTTCAAGAAGGTCAAGGTGGTCGTTGTGTTGGTATCGAGAAAGAAGCTC TTGTTCACCACGATATCATCGACTGTATCGAGAACATGCAGAACCCAGACCGTTCTGAGTTGTTCCGCGTTGCAGAAGAG TTATTCTAA
Upstream 100 bases:
>100_bases TTGAGGAAATGTAACATAACGTACAAATATAGATTTAAAATCTTGTTGATATACAATCAGCAAGAACAAGAATTGAATAA TAGATTCCCAAAAATCGAGG
Downstream 100 bases:
>100_bases GCCAAGCTTAGCGTTCGCTTAAAAAATATTAAAAACCGCTGATTGTTCAGCGGTTTTTTTGTGCCTGTCGTTTGAGTTTT CACAAACGGCAGGCACAAAA
Product: 6-phosphofructokinase
Products: NA
Alternate protein names: Phosphofructokinase; Phosphohexokinase [H]
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSMIKKIGVLTSGGDAPGMNAAVRGVVRTALSVGIEVYGIYDGYQGLVEDRIEKLDRSSVSDVINRGGTFLGSARFPEFK DVAVREKGIENLKKHGIEALVVIGGDGSYMGAKKLTEMGYPCIGLPGTIDNDIAGTDYTIGYLTALNTVIDSIDRLRDTS SSHQRISIVEIMGRHCGDLTLMSAIAGGCEYIITPETGLDKDQLISNIQDGIAKGKKHAIIALTELMMDANELAKEIETA TGRETRATVLGHIQRGGRPTAFDRVLASRMGNYAVHLLQEGQGGRCVGIEKEALVHHDIIDCIENMQNPDRSELFRVAEE LF
Sequences:
>Translated_322_residues MSMIKKIGVLTSGGDAPGMNAAVRGVVRTALSVGIEVYGIYDGYQGLVEDRIEKLDRSSVSDVINRGGTFLGSARFPEFK DVAVREKGIENLKKHGIEALVVIGGDGSYMGAKKLTEMGYPCIGLPGTIDNDIAGTDYTIGYLTALNTVIDSIDRLRDTS SSHQRISIVEIMGRHCGDLTLMSAIAGGCEYIITPETGLDKDQLISNIQDGIAKGKKHAIIALTELMMDANELAKEIETA TGRETRATVLGHIQRGGRPTAFDRVLASRMGNYAVHLLQEGQGGRCVGIEKEALVHHDIIDCIENMQNPDRSELFRVAEE LF >Mature_321_residues SMIKKIGVLTSGGDAPGMNAAVRGVVRTALSVGIEVYGIYDGYQGLVEDRIEKLDRSSVSDVINRGGTFLGSARFPEFKD VAVREKGIENLKKHGIEALVVIGGDGSYMGAKKLTEMGYPCIGLPGTIDNDIAGTDYTIGYLTALNTVIDSIDRLRDTSS SHQRISIVEIMGRHCGDLTLMSAIAGGCEYIITPETGLDKDQLISNIQDGIAKGKKHAIIALTELMMDANELAKEIETAT GRETRATVLGHIQRGGRPTAFDRVLASRMGNYAVHLLQEGQGGRCVGIEKEALVHHDIIDCIENMQNPDRSELFRVAEEL F
Specific function: Key control step of glycolysis. [C]
COG id: COG0205
COG function: function code G; 6-phosphofructokinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphofructokinase family [H]
Homologues:
Organism=Homo sapiens, GI11321601, Length=346, Percent_Identity=40.1734104046243, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI48762920, Length=313, Percent_Identity=42.1725239616613, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI266453768, Length=312, Percent_Identity=41.025641025641, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI266453748, Length=312, Percent_Identity=41.025641025641, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI4505749, Length=312, Percent_Identity=41.025641025641, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI266453619, Length=312, Percent_Identity=41.025641025641, Blast_Score=213, Evalue=2e-55, Organism=Escherichia coli, GI1790350, Length=320, Percent_Identity=71.5625, Blast_Score=479, Evalue=1e-137, Organism=Caenorhabditis elegans, GI25147584, Length=341, Percent_Identity=37.8299120234604, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI17558788, Length=309, Percent_Identity=38.5113268608414, Blast_Score=189, Evalue=1e-48, Organism=Caenorhabditis elegans, GI72003601, Length=290, Percent_Identity=32.7586206896552, Blast_Score=143, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6321679, Length=313, Percent_Identity=39.9361022364217, Blast_Score=202, Evalue=6e-53, Organism=Saccharomyces cerevisiae, GI6323861, Length=315, Percent_Identity=35.8730158730159, Blast_Score=177, Evalue=2e-45, Organism=Drosophila melanogaster, GI28573326, Length=341, Percent_Identity=39.0029325513196, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI24652337, Length=341, Percent_Identity=39.2961876832845, Blast_Score=218, Evalue=5e-57, Organism=Drosophila melanogaster, GI17647809, Length=341, Percent_Identity=39.2961876832845, Blast_Score=218, Evalue=5e-57,
Paralogues:
None
Copy number: 3981 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 950 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012003 - InterPro: IPR012828 - InterPro: IPR022953 - InterPro: IPR015912 - InterPro: IPR000023 [H]
Pfam domain/function: PF00365 PFK [H]
EC number: =2.7.1.11 [H]
Molecular weight: Translated: 34797; Mature: 34666
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00433 PHOSPHOFRUCTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMIKKIGVLTSGGDAPGMNAAVRGVVRTALSVGIEVYGIYDGYQGLVEDRIEKLDRSSV CCHHHHHCCEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHH SDVINRGGTFLGSARFPEFKDVAVREKGIENLKKHGIEALVVIGGDGSYMGAKKLTEMGY HHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCC PCIGLPGTIDNDIAGTDYTIGYLTALNTVIDSIDRLRDTSSSHQRISIVEIMGRHCGDLT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHH LMSAIAGGCEYIITPETGLDKDQLISNIQDGIAKGKKHAIIALTELMMDANELAKEIETA HHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH TGRETRATVLGHIQRGGRPTAFDRVLASRMGNYAVHLLQEGQGGRCVGIEKEALVHHDII CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHEEEEEECCCCCEEECCCHHHHHHHHHH DCIENMQNPDRSELFRVAEELF HHHHHCCCCCHHHHHHHHHHHC >Mature Secondary Structure SMIKKIGVLTSGGDAPGMNAAVRGVVRTALSVGIEVYGIYDGYQGLVEDRIEKLDRSSV CHHHHHCCEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHH SDVINRGGTFLGSARFPEFKDVAVREKGIENLKKHGIEALVVIGGDGSYMGAKKLTEMGY HHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCC PCIGLPGTIDNDIAGTDYTIGYLTALNTVIDSIDRLRDTSSSHQRISIVEIMGRHCGDLT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHH LMSAIAGGCEYIITPETGLDKDQLISNIQDGIAKGKKHAIIALTELMMDANELAKEIETA HHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH TGRETRATVLGHIQRGGRPTAFDRVLASRMGNYAVHLLQEGQGGRCVGIEKEALVHHDII CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHEEEEEECCCCCEEECCCHHHHHHHHHH DCIENMQNPDRSELFRVAEELF HHHHHCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]