| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is menA [H]
Identifier: 218710820
GI number: 218710820
Start: 3057862
End: 3058779
Strand: Direct
Name: menA [H]
Synonym: VS_2903
Alternate gene names: 218710820
Gene position: 3057862-3058779 (Clockwise)
Preceding gene: 218710819
Following gene: 218710821
Centisome position: 92.68
GC content: 46.62
Gene sequence:
>918_bases ATGAAACAATCTCTACTGATTTGGCTTGATGCCGCACGCCCAAAAACTCTGCCTCTCGCACTTGTCTCTATTCTTACAGG AAGTAGTTTAGCGTTCGCTGGTGGTCATTTTTCTTTATCAATAGCCCTGCTGGCATTTTTAACCGCCACTCTATTACAGA TTCTGTCGAACTTAGCCAATGACTATGGCGACGCGGTAAAAGGCACAGACAACGAAAACCGTCTAGGGCCAACACGTGCA ATGCAATCTGGCGCGGTGACCGCGAAAACCATGAAGCAAGCGATCATCCTCAACATCGTATTTACCATGCTCGCTGGGCT GATTCTTATCTTTCATGCCTTAACCTCGATTGAGAGTATCTTATCTTTCATTGCGTTAGGCGTATTAGCCATTGTTGCAG CCATCGCTTACACCGTCGGCAATAAACCTTATGGTTATATTGGCCTTGGCGACTTATCGGTATTTATCTTCTTCGGTTTG TTAGGCGTTTCAGGGACTTATTTCTTACACACTGGCCATGTTGAACCAAGCCTATTCCTTCCGGCATTGGGCTGCGGCTT GATGGCGGTTGCGGTACTCAATATCAACAACATGCGGGATATTGAAAACGACAGCGAATGTGGCAAACGCACCATGGCGG TTCGCCTAGGGCAGCGCAAAGCCAAACACTATCATTTTGCACTGCTTGGGCTCGCCCTTGCCTCTTTCGCTATCTACCTA CTGATTCAAGAAAAACCGGTCTGGATCAGCCTGCCGTTTTTACTAAGCATTATTATTGTTTATAAGCACGGTAAGGCCGT TTGGGAAACCGAAAAGCCAGCGCAGATTGCACCAATGATGCCCGTGATAGTGAAATGTTCACTGGTCACTAACCTATTGT TTGCAGGGGTTGTCGTAGCTCAAACTCTATTGAGTTAA
Upstream 100 bases:
>100_bases ATTCAAGGCCCACTTTCGAGTGGGCTTTTTATTACCCGAAAAATGGGCGTATACTCAAATCACAGTATGAAACGAAGACT TACAAAGAATTAGACCTACG
Downstream 100 bases:
>100_bases ATGAGACTAATCATTGCAAAGGGATCAAGCACCGATATACTCAAAGTAAGCTCATTGTTCAAAAGGTATACTAATGGAAT ACAACACTTCAGCACTGTGC
Product: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Products: NA
Alternate protein names: DHNA-octaprenyltransferase [H]
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MKQSLLIWLDAARPKTLPLALVSILTGSSLAFAGGHFSLSIALLAFLTATLLQILSNLANDYGDAVKGTDNENRLGPTRA MQSGAVTAKTMKQAIILNIVFTMLAGLILIFHALTSIESILSFIALGVLAIVAAIAYTVGNKPYGYIGLGDLSVFIFFGL LGVSGTYFLHTGHVEPSLFLPALGCGLMAVAVLNINNMRDIENDSECGKRTMAVRLGQRKAKHYHFALLGLALASFAIYL LIQEKPVWISLPFLLSIIIVYKHGKAVWETEKPAQIAPMMPVIVKCSLVTNLLFAGVVVAQTLLS
Sequences:
>Translated_305_residues MKQSLLIWLDAARPKTLPLALVSILTGSSLAFAGGHFSLSIALLAFLTATLLQILSNLANDYGDAVKGTDNENRLGPTRA MQSGAVTAKTMKQAIILNIVFTMLAGLILIFHALTSIESILSFIALGVLAIVAAIAYTVGNKPYGYIGLGDLSVFIFFGL LGVSGTYFLHTGHVEPSLFLPALGCGLMAVAVLNINNMRDIENDSECGKRTMAVRLGQRKAKHYHFALLGLALASFAIYL LIQEKPVWISLPFLLSIIIVYKHGKAVWETEKPAQIAPMMPVIVKCSLVTNLLFAGVVVAQTLLS >Mature_305_residues MKQSLLIWLDAARPKTLPLALVSILTGSSLAFAGGHFSLSIALLAFLTATLLQILSNLANDYGDAVKGTDNENRLGPTRA MQSGAVTAKTMKQAIILNIVFTMLAGLILIFHALTSIESILSFIALGVLAIVAAIAYTVGNKPYGYIGLGDLSVFIFFGL LGVSGTYFLHTGHVEPSLFLPALGCGLMAVAVLNINNMRDIENDSECGKRTMAVRLGQRKAKHYHFALLGLALASFAIYL LIQEKPVWISLPFLLSIIIVYKHGKAVWETEKPAQIAPMMPVIVKCSLVTNLLFAGVVVAQTLLS
Specific function: Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to dimethylmenaquinone (DMK). Attaches octaprenylpyrophosphate, a membrane-bound 40-carbon side chain to DHNA. The conversion of DHNA to DMK proceeds in three stages:the removal of the carboxyl group of DHNA
COG id: COG1575
COG function: function code H; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the menA family [H]
Homologues:
Organism=Escherichia coli, GI1790365, Length=295, Percent_Identity=49.8305084745763, Blast_Score=286, Evalue=9e-79, Organism=Drosophila melanogaster, GI17737429, Length=297, Percent_Identity=27.6094276094276, Blast_Score=79, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004657 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: =2.5.1.74 [H]
Molecular weight: Translated: 32713; Mature: 32713
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSLLIWLDAARPKTLPLALVSILTGSSLAFAGGHFSLSIALLAFLTATLLQILSNLAN CCCCEEEEEECCCCCHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHH DYGDAVKGTDNENRLGPTRAMQSGAVTAKTMKQAIILNIVFTMLAGLILIFHALTSIESI HHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSFIALGVLAIVAAIAYTVGNKPYGYIGLGDLSVFIFFGLLGVSGTYFLHTGHVEPSLFL HHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH PALGCGLMAVAVLNINNMRDIENDSECGKRTMAVRLGQRKAKHYHFALLGLALASFAIYL HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIQEKPVWISLPFLLSIIIVYKHGKAVWETEKPAQIAPMMPVIVKCSLVTNLLFAGVVVA HEECCCCEEEHHHHHHHHHHHHCCCEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHH QTLLS HHHCC >Mature Secondary Structure MKQSLLIWLDAARPKTLPLALVSILTGSSLAFAGGHFSLSIALLAFLTATLLQILSNLAN CCCCEEEEEECCCCCHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHH DYGDAVKGTDNENRLGPTRAMQSGAVTAKTMKQAIILNIVFTMLAGLILIFHALTSIESI HHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSFIALGVLAIVAAIAYTVGNKPYGYIGLGDLSVFIFFGLLGVSGTYFLHTGHVEPSLFL HHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH PALGCGLMAVAVLNINNMRDIENDSECGKRTMAVRLGQRKAKHYHFALLGLALASFAIYL HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIQEKPVWISLPFLLSIIIVYKHGKAVWETEKPAQIAPMMPVIVKCSLVTNLLFAGVVVA HEECCCCEEEHHHHHHHHHHHHCCCEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHH QTLLS HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9573170; 8346018; 9278503 [H]