| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is argH [H]
Identifier: 218710802
GI number: 218710802
Start: 3033111
End: 3034985
Strand: Reverse
Name: argH [H]
Synonym: VS_2885
Alternate gene names: 218710802
Gene position: 3034985-3033111 (Counterclockwise)
Preceding gene: 218710803
Following gene: 218710800
Centisome position: 91.99
GC content: 46.99
Gene sequence:
>1875_bases ATGGCATTATGGGGCGGTAGATTTACCCAAGCAGCAGACACCCGGTTTAAAGATTTTAACGATTCTCTTCGTTTTGATTA CCGATTGGCTGAGCAAGACATTGTGGGCTCAATTGCCTGGTCTAAAGCTCTACTGTCGGTCAACGTATTAACCGAAGAAG AGCAACAGAAGCTTGAGTTAGCGTTGAATGAGCTAAAACTTGAGGTGATGGAAGATCCTGAACAGATTCTACGTTCTGAT GCAGAAGATATTCACAGCTGGGTCGAGCAACAACTTATCGGCAAAGTCGGTGACTTGGGCAAAAAACTTCACACTGGCCG TTCTCGTAATGACCAAGTGGCGACCGACCTGAAATTATGGTGTCGTCAGCAAGGTAATCAACTGCTACTGGCATTGGATC GCCTACAAAGCCAAATGGTGAACGTTGCTTCTCAGCATCAAGAAACCGTGCTTCCTGGCTACACTCACTTACAACGTGCT CAGCCGGTAACTTTTGCTCACTGGTGCTTGGCTTACGTTGAAATGCTTGAGCGTGATTATTCTCGTTTGAATGATGCGAT TAAGCGTCTAGATACATGTCCGCTGGGTTCTGGTGCCCTTGCAGGAACTGCTTACCCGATGGACCGTGAAGAGTTAGCTC ACAACTTAGGTTTCCGTCGTGCAACGCGCAACTCTCTAGATTCAGTTTCTGACCGTGATCATGTGATGGAGCTGATGTCG ATCGCTTCTATTTCAATGCTTCACCTTTCACGTCTTGCAGAAGATATGATTTTCTACAACTCAGGTGAATCGAACTTCAT CGAGTTAGCGGATACCGTGACGTCAGGTTCATCTCTGATGCCACAAAAGAAAAACCCTGATGCGCTCGAACTTATCCGTG GCAAAACTGGCCGTGTGTACGGTTCATTAGCCGCAATGATGATGACAGTGAAAGCCCTGCCTTTGGCGTACAACAAAGAT ATGCAAGAAGATAAAGAAGGTCTGTTCGACGCTTTAGACACTTGGAATGATTGTATGGAAATGGCTGCTCTTTGTTTTGA CGGCATTAAAGTGAATGGCGAACGTACACTTGAAGCAGCGAAACAAGGCTACGCGAACTCAACCGAACTGGCTGATTACC TAGTAGCGAAAGGCATTCCTTTCCGTGAAGCTCACCATATTGTTGGTGTGACGGTAGTGGCGGCGATTGCTAAAGGTTGT GCATTAGAAGAGTTAACCATCGCAGAGATGAAAGAGTTCTCTGAGGTGATTGAAGAGGATGTGTATGACATCCTGACTAT TGAATCGTGTCTTGAAAAACGTAGCGCGCTAGGCGGTGTATCACCACAGCAAGTGGCTTACGCGGTTGACCAAGCTGAGA AGCGTTTATCACAGCGTGATACTTCTATCGTTAAGGTTCGTTCTGCTCGTCTGACCGATATTGAAGCGTTGGAAGGCATG GTGGCCTACTGGGCTAATATGGGTGAAAACCTGCCTCGTTCTCGTAATGAACTGGTGCGTGATATTGGCTCGTTTGCCGT CGCAGAGCATCATGGAGAGGTGACGGGTTGTGCATCACTCTATGTGTATGACTCTGGTTTAGCGGAAATCCGTTCGTTAG GTGTTGAAGCTGGCTGGCAAGGTCAAGGGCAGGGCACCGCGATTGTGCAGCACTTGGTTGATAAAGCGCGACAAATGGCG ATCAAGAAGGTGTTTGTGCTGACTCGTACCCCAGAGTTCTTTATGAAGCATGACTTTTTACCGACATCAAAATCTCTGTT GCCTGAGAAGGTACTGAAAGATTGTGATCAGTGTCCTCGCCAACATGCATGTGATGAAGTGGCGTTGGAAGTGAACTTGG TTGAACAGATCATCGCAAAGGTAAATGTTGCATAA
Upstream 100 bases:
>100_bases TTTGAATTGCCGTAAGTTTAAACCATCAGAAAAATACTGAATTTTAATCAGAATTATCATTTGCAAAAACAGTGAGCACT GTGCAATTAGGAGATACACA
Downstream 100 bases:
>100_bases GGCATTGATTTTATGGCGCCTAAAAAAAAGATCAAAAATCTGATCTTTTTTGGGAACAAACTGAGAAAAGTCCGGTCTAT TAAAGTACCACTGCTTTTTC
Product: bifunctional argininosuccinate lyase/N-acetylglutamate synthase
Products: NA
Alternate protein names: Argininosuccinate lyase; ASAL; Arginosuccinase; Probable acetyltransferase [H]
Number of amino acids: Translated: 624; Mature: 623
Protein sequence:
>624_residues MALWGGRFTQAADTRFKDFNDSLRFDYRLAEQDIVGSIAWSKALLSVNVLTEEEQQKLELALNELKLEVMEDPEQILRSD AEDIHSWVEQQLIGKVGDLGKKLHTGRSRNDQVATDLKLWCRQQGNQLLLALDRLQSQMVNVASQHQETVLPGYTHLQRA QPVTFAHWCLAYVEMLERDYSRLNDAIKRLDTCPLGSGALAGTAYPMDREELAHNLGFRRATRNSLDSVSDRDHVMELMS IASISMLHLSRLAEDMIFYNSGESNFIELADTVTSGSSLMPQKKNPDALELIRGKTGRVYGSLAAMMMTVKALPLAYNKD MQEDKEGLFDALDTWNDCMEMAALCFDGIKVNGERTLEAAKQGYANSTELADYLVAKGIPFREAHHIVGVTVVAAIAKGC ALEELTIAEMKEFSEVIEEDVYDILTIESCLEKRSALGGVSPQQVAYAVDQAEKRLSQRDTSIVKVRSARLTDIEALEGM VAYWANMGENLPRSRNELVRDIGSFAVAEHHGEVTGCASLYVYDSGLAEIRSLGVEAGWQGQGQGTAIVQHLVDKARQMA IKKVFVLTRTPEFFMKHDFLPTSKSLLPEKVLKDCDQCPRQHACDEVALEVNLVEQIIAKVNVA
Sequences:
>Translated_624_residues MALWGGRFTQAADTRFKDFNDSLRFDYRLAEQDIVGSIAWSKALLSVNVLTEEEQQKLELALNELKLEVMEDPEQILRSD AEDIHSWVEQQLIGKVGDLGKKLHTGRSRNDQVATDLKLWCRQQGNQLLLALDRLQSQMVNVASQHQETVLPGYTHLQRA QPVTFAHWCLAYVEMLERDYSRLNDAIKRLDTCPLGSGALAGTAYPMDREELAHNLGFRRATRNSLDSVSDRDHVMELMS IASISMLHLSRLAEDMIFYNSGESNFIELADTVTSGSSLMPQKKNPDALELIRGKTGRVYGSLAAMMMTVKALPLAYNKD MQEDKEGLFDALDTWNDCMEMAALCFDGIKVNGERTLEAAKQGYANSTELADYLVAKGIPFREAHHIVGVTVVAAIAKGC ALEELTIAEMKEFSEVIEEDVYDILTIESCLEKRSALGGVSPQQVAYAVDQAEKRLSQRDTSIVKVRSARLTDIEALEGM VAYWANMGENLPRSRNELVRDIGSFAVAEHHGEVTGCASLYVYDSGLAEIRSLGVEAGWQGQGQGTAIVQHLVDKARQMA IKKVFVLTRTPEFFMKHDFLPTSKSLLPEKVLKDCDQCPRQHACDEVALEVNLVEQIIAKVNVA >Mature_623_residues ALWGGRFTQAADTRFKDFNDSLRFDYRLAEQDIVGSIAWSKALLSVNVLTEEEQQKLELALNELKLEVMEDPEQILRSDA EDIHSWVEQQLIGKVGDLGKKLHTGRSRNDQVATDLKLWCRQQGNQLLLALDRLQSQMVNVASQHQETVLPGYTHLQRAQ PVTFAHWCLAYVEMLERDYSRLNDAIKRLDTCPLGSGALAGTAYPMDREELAHNLGFRRATRNSLDSVSDRDHVMELMSI ASISMLHLSRLAEDMIFYNSGESNFIELADTVTSGSSLMPQKKNPDALELIRGKTGRVYGSLAAMMMTVKALPLAYNKDM QEDKEGLFDALDTWNDCMEMAALCFDGIKVNGERTLEAAKQGYANSTELADYLVAKGIPFREAHHIVGVTVVAAIAKGCA LEELTIAEMKEFSEVIEEDVYDILTIESCLEKRSALGGVSPQQVAYAVDQAEKRLSQRDTSIVKVRSARLTDIEALEGMV AYWANMGENLPRSRNELVRDIGSFAVAEHHGEVTGCASLYVYDSGLAEIRSLGVEAGWQGQGQGTAIVQHLVDKARQMAI KKVFVLTRTPEFFMKHDFLPTSKSLLPEKVLKDCDQCPRQHACDEVALEVNLVEQIIAKVNVA
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Homo sapiens, GI31541964, Length=454, Percent_Identity=42.9515418502203, Blast_Score=360, Evalue=2e-99, Organism=Homo sapiens, GI68303542, Length=454, Percent_Identity=42.9515418502203, Blast_Score=360, Evalue=2e-99, Organism=Homo sapiens, GI68303549, Length=454, Percent_Identity=40.7488986784141, Blast_Score=328, Evalue=1e-89, Organism=Homo sapiens, GI68303547, Length=449, Percent_Identity=40.7572383073497, Blast_Score=325, Evalue=1e-88, Organism=Escherichia coli, GI1790398, Length=456, Percent_Identity=73.2456140350877, Blast_Score=690, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6321806, Length=459, Percent_Identity=43.1372549019608, Blast_Score=371, Evalue=1e-103, Organism=Drosophila melanogaster, GI221473854, Length=443, Percent_Identity=41.3092550790068, Blast_Score=345, Evalue=7e-95, Organism=Drosophila melanogaster, GI78706858, Length=443, Percent_Identity=41.3092550790068, Blast_Score=345, Evalue=7e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR009049 - InterPro: IPR011244 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF00206 Lyase_1 [H]
EC number: =4.3.2.1 [H]
Molecular weight: Translated: 69553; Mature: 69422
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALWGGRFTQAADTRFKDFNDSLRFDYRLAEQDIVGSIAWSKALLSVNVLTEEEQQKLEL CCCCCCCCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH ALNELKLEVMEDPEQILRSDAEDIHSWVEQQLIGKVGDLGKKLHTGRSRNDQVATDLKLW HHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH CRQQGNQLLLALDRLQSQMVNVASQHQETVLPGYTHLQRAQPVTFAHWCLAYVEMLERDY HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH SRLNDAIKRLDTCPLGSGALAGTAYPMDREELAHNLGFRRATRNSLDSVSDRDHVMELMS HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHH IASISMLHLSRLAEDMIFYNSGESNFIELADTVTSGSSLMPQKKNPDALELIRGKTGRVY HHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCHHH GSLAAMMMTVKALPLAYNKDMQEDKEGLFDALDTWNDCMEMAALCFDGIKVNGERTLEAA HHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHH KQGYANSTELADYLVAKGIPFREAHHIVGVTVVAAIAKGCALEELTIAEMKEFSEVIEED HCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH VYDILTIESCLEKRSALGGVSPQQVAYAVDQAEKRLSQRDTSIVKVRSARLTDIEALEGM HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHH VAYWANMGENLPRSRNELVRDIGSFAVAEHHGEVTGCASLYVYDSGLAEIRSLGVEAGWQ HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCHHHHHHCCCCCCCC GQGQGTAIVQHLVDKARQMAIKKVFVLTRTPEFFMKHDFLPTSKSLLPEKVLKDCDQCPR CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHCHHHHHHHHHHCHH QHACDEVALEVNLVEQIIAKVNVA HHCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALWGGRFTQAADTRFKDFNDSLRFDYRLAEQDIVGSIAWSKALLSVNVLTEEEQQKLEL CCCCCCCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH ALNELKLEVMEDPEQILRSDAEDIHSWVEQQLIGKVGDLGKKLHTGRSRNDQVATDLKLW HHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH CRQQGNQLLLALDRLQSQMVNVASQHQETVLPGYTHLQRAQPVTFAHWCLAYVEMLERDY HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH SRLNDAIKRLDTCPLGSGALAGTAYPMDREELAHNLGFRRATRNSLDSVSDRDHVMELMS HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHH IASISMLHLSRLAEDMIFYNSGESNFIELADTVTSGSSLMPQKKNPDALELIRGKTGRVY HHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCHHH GSLAAMMMTVKALPLAYNKDMQEDKEGLFDALDTWNDCMEMAALCFDGIKVNGERTLEAA HHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHH KQGYANSTELADYLVAKGIPFREAHHIVGVTVVAAIAKGCALEELTIAEMKEFSEVIEED HCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH VYDILTIESCLEKRSALGGVSPQQVAYAVDQAEKRLSQRDTSIVKVRSARLTDIEALEGM HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHH VAYWANMGENLPRSRNELVRDIGSFAVAEHHGEVTGCASLYVYDSGLAEIRSLGVEAGWQ HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCHHHHHHCCCCCCCC GQGQGTAIVQHLVDKARQMAIKKVFVLTRTPEFFMKHDFLPTSKSLLPEKVLKDCDQCPR CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHCHHHHHHHHHHCHH QHACDEVALEVNLVEQIIAKVNVA HHCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]