| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710768
Identifier: 218710768
GI number: 218710768
Start: 2996445
End: 2996915
Strand: Direct
Name: 218710768
Synonym: VS_2851
Alternate gene names: NA
Gene position: 2996445-2996915 (Clockwise)
Preceding gene: 218710767
Following gene: 218710769
Centisome position: 90.82
GC content: 46.71
Gene sequence:
>471_bases ATGAGCCCAGAGCACGCACCAATATCACTAACACTGGAACGACTATGGCAATTTAGCCTTCAATATTACAGTGTGCGCGG TGTTAAGGATGCGTGCTTAGCTTTGCAAAACCAATTCCATGGCAACGTCAATCTACTGCTGCTTCTCAAATGGCTTGATG AGCAGCAACTCTCTTTCGCTGAGGAGGAGTGGCACAAGGTGCAACAATGCTTAAGTCGCTCTGAAACCTTGCTTCATAGT TATCGAGAGCTGCGTAAACACCTCAAAGCACACGTTGTTGATTCACTCTACCGTGAAGCCTTACAATTTGAGCTGCAGCT TGAAAAGCAACAACAGTCCGACCTCGTCGACTGCATTAAGTCTCTTCAACTTACAGCGAACCAACAATCACCGCTCGCTT TACAGTACTGTCGTTTATTAGGGGCGGAAAATCTCTACGACGCTTTTTCTGAACCAGCACCACAGCCCTAA
Upstream 100 bases:
>100_bases CTCTACAAGCGAGCAGTAAGTCACAGCTAGAAGAAGTTGAAATGGATTGGATGTCCACTCAAGAAGAGCTTGAGCAGATG GAACTGGATATGGATAGCTT
Downstream 100 bases:
>100_bases CGCATTTCCTTTTCCTTTTATTCAATCAAGCTCCAAGCTTAACTGCGCTCGCTCGCTACCATGATCGCATGCTGACTAAA ACACATTTGGGGGAGTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSPEHAPISLTLERLWQFSLQYYSVRGVKDACLALQNQFHGNVNLLLLLKWLDEQQLSFAEEEWHKVQQCLSRSETLLHS YRELRKHLKAHVVDSLYREALQFELQLEKQQQSDLVDCIKSLQLTANQQSPLALQYCRLLGAENLYDAFSEPAPQP
Sequences:
>Translated_156_residues MSPEHAPISLTLERLWQFSLQYYSVRGVKDACLALQNQFHGNVNLLLLLKWLDEQQLSFAEEEWHKVQQCLSRSETLLHS YRELRKHLKAHVVDSLYREALQFELQLEKQQQSDLVDCIKSLQLTANQQSPLALQYCRLLGAENLYDAFSEPAPQP >Mature_155_residues SPEHAPISLTLERLWQFSLQYYSVRGVKDACLALQNQFHGNVNLLLLLKWLDEQQLSFAEEEWHKVQQCLSRSETLLHSY RELRKHLKAHVVDSLYREALQFELQLEKQQQSDLVDCIKSLQLTANQQSPLALQYCRLLGAENLYDAFSEPAPQP
Specific function: Unknown
COG id: COG5589
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18181; Mature: 18050
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPEHAPISLTLERLWQFSLQYYSVRGVKDACLALQNQFHGNVNLLLLLKWLDEQQLSFA CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHH EEEWHKVQQCLSRSETLLHSYRELRKHLKAHVVDSLYREALQFELQLEKQQQSDLVDCIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLQLTANQQSPLALQYCRLLGAENLYDAFSEPAPQP HHHHHCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCC >Mature Secondary Structure SPEHAPISLTLERLWQFSLQYYSVRGVKDACLALQNQFHGNVNLLLLLKWLDEQQLSFA CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHH EEEWHKVQQCLSRSETLLHSYRELRKHLKAHVVDSLYREALQFELQLEKQQQSDLVDCIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLQLTANQQSPLALQYCRLLGAENLYDAFSEPAPQP HHHHHCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA