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The map label for this gene is ytfB [H]

Identifier: 218710718

GI number: 218710718

Start: 2964288

End: 2964968

Strand: Reverse

Name: ytfB [H]

Synonym: VS_2801

Alternate gene names: 218710718

Gene position: 2964968-2964288 (Counterclockwise)

Preceding gene: 218710719

Following gene: 218710706

Centisome position: 89.87

GC content: 41.56

Gene sequence:

>681_bases
ATGTCAATTTTCTTGCTTTGCTCTCTGTTGTCGCGGAAAGATCTATACTGTTGGTACTTTGGTTTTTATACTGTAGTTAT
TCAATGTATAGGACGCAGTGGCATGAATCGTCGTCAAAAGAAAAAACAGAAAGTAGACCACTTAGCAGAGTTCAAGGACC
GACTGAATCAGGTCAAAGAGAAACTAAGCTCGATCGATCTAAAGAAAATGAAAACCTCATCAGTGCAAACTTGGGGATCA
TTGCCGAAATTACACCAGAAATTATTGATGGTGATTTCGCCGATCATATTAATCTTATTGTTTGCACCGCTACCAGAGCC
TAAAGTAGACAATGCACCAGCAACATCTCGTGTTGAGCTTGAGATAAATACTGTTGGCTTAAGCGAGCAGAAAAATGCTA
AAAGTAATTCTTCTGAGCCAACCAGTTGGCAAGAGTATCTTGTTAAGCAAGGAGATACGTTAGCTCAAGTGTTCCGAAAT
AATGATCTACCGCTGTCTGATCTTAACGCTTTGGTTCGTATTGAAGGTGCAGACAAGCCGCTTAGCCAGATTCGTAAAGG
CCAGCTGGTTCGATTCAAACTAGCCGAGACTGGGCAACTAGACATTCTTCAGCTTGAGAAAGGCAATACTTCGGTGATGT
TTTTCCGGTTATCAGATGGTGGCTTTGGTCGCAGTAAATAG

Upstream 100 bases:

>100_bases
CTTTTTGTCAGTACGAAAAGGGTAAGAATACCAGTATTAGCAGCCTGAATAAACGGCTAGCCTCTGATCACTTACGCTTT
ACCGTGTCCAAATCACAGCT

Downstream 100 bases:

>100_bases
ATGAATAGTGAACCTGAGTTAAAGCACTTCACCAGACACATATAAACGATAGAAAAGAGCTAAGCATTAGCTCTTTTTTT
TGGTCGCTTGAAAGGGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSIFLLCSLLSRKDLYCWYFGFYTVVIQCIGRSGMNRRQKKKQKVDHLAEFKDRLNQVKEKLSSIDLKKMKTSSVQTWGS
LPKLHQKLLMVISPIILILLFAPLPEPKVDNAPATSRVELEINTVGLSEQKNAKSNSSEPTSWQEYLVKQGDTLAQVFRN
NDLPLSDLNALVRIEGADKPLSQIRKGQLVRFKLAETGQLDILQLEKGNTSVMFFRLSDGGFGRSK

Sequences:

>Translated_226_residues
MSIFLLCSLLSRKDLYCWYFGFYTVVIQCIGRSGMNRRQKKKQKVDHLAEFKDRLNQVKEKLSSIDLKKMKTSSVQTWGS
LPKLHQKLLMVISPIILILLFAPLPEPKVDNAPATSRVELEINTVGLSEQKNAKSNSSEPTSWQEYLVKQGDTLAQVFRN
NDLPLSDLNALVRIEGADKPLSQIRKGQLVRFKLAETGQLDILQLEKGNTSVMFFRLSDGGFGRSK
>Mature_225_residues
SIFLLCSLLSRKDLYCWYFGFYTVVIQCIGRSGMNRRQKKKQKVDHLAEFKDRLNQVKEKLSSIDLKKMKTSSVQTWGSL
PKLHQKLLMVISPIILILLFAPLPEPKVDNAPATSRVELEINTVGLSEQKNAKSNSSEPTSWQEYLVKQGDTLAQVFRNN
DLPLSDLNALVRIEGADKPLSQIRKGQLVRFKLAETGQLDILQLEKGNTSVMFFRLSDGGFGRSK

Specific function: Unknown

COG id: COG3061

COG function: function code M; Cell envelope opacity-associated protein A

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082389, Length=85, Percent_Identity=40, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013731
- InterPro:   IPR007340 [H]

Pfam domain/function: PF04225 OapA; PF08525 OapA_N [H]

EC number: NA

Molecular weight: Translated: 25617; Mature: 25486

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFLLCSLLSRKDLYCWYFGFYTVVIQCIGRSGMNRRQKKKQKVDHLAEFKDRLNQVKE
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KLSSIDLKKMKTSSVQTWGSLPKLHQKLLMVISPIILILLFAPLPEPKVDNAPATSRVEL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
EINTVGLSEQKNAKSNSSEPTSWQEYLVKQGDTLAQVFRNNDLPLSDLNALVRIEGADKP
EEEEECCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCHHHCCEEEEECCCCCH
LSQIRKGQLVRFKLAETGQLDILQLEKGNTSVMFFRLSDGGFGRSK
HHHHHCCCEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure 
SIFLLCSLLSRKDLYCWYFGFYTVVIQCIGRSGMNRRQKKKQKVDHLAEFKDRLNQVKE
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KLSSIDLKKMKTSSVQTWGSLPKLHQKLLMVISPIILILLFAPLPEPKVDNAPATSRVEL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
EINTVGLSEQKNAKSNSSEPTSWQEYLVKQGDTLAQVFRNNDLPLSDLNALVRIEGADKP
EEEEECCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCHHHCCEEEEECCCCCH
LSQIRKGQLVRFKLAETGQLDILQLEKGNTSVMFFRLSDGGFGRSK
HHHHHCCCEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]