Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218710715

Identifier: 218710715

GI number: 218710715

Start: 2962304

End: 2962870

Strand: Direct

Name: 218710715

Synonym: VS_2798

Alternate gene names: NA

Gene position: 2962304-2962870 (Clockwise)

Preceding gene: 218710714

Following gene: 218710716

Centisome position: 89.79

GC content: 43.21

Gene sequence:

>567_bases
ATGCACACCTCTTTTATCGAACAACTACAAAGCTTTGACTTCTCTGAGAGTCAGATTGAATCTCTATTAGCTGTCGCGAA
GCCGCTTGAACTGCCAACCCGACACATCCTGATCAATCAAGGTGAGATGGCGAATTCAATCTACTTTGTACTTGAAGGCT
TATGCCACGCTTGTTATCTCACTAATGACGGTAAGCAATACAGCAAAGAGTTCTACTGGGAACAAGACTGGATCATCGGC
TTTGAGAGTTTGATAAAGAACCAAGCGTCCCCTTACCTACTAGAAACGCTCACACCCATCACAATGTTAGAACTGCCAAT
GAATGCGGTTATCGAGTGGCGTGCATCAAATAACCCTCTGTATTTAAAGCTGTTAGAAACTCAGCTGATGCACAAGGAAA
ACAAAGAACGCTTTATGTTGCTTTATACCCCAGAGCAACGCTATCAACTTTTCTGCGAACATTACCCCGACCTTGAACAG
CGCTTGAACGACAATCAAATTGCGGCTTACCTAGGTATAACCGCGATCAGCCTGAGCAGAATTAAAGGTCGAATTAACAA
TAGTTAA

Upstream 100 bases:

>100_bases
ATTATCTAGAACAGCACAGTCGACGCTGATTTAGCCTGCTCTGTACCTCTCCCCAAATAAGTGCGATGATCTCGGTACTT
ATTTGGGTTAGGTTATTTTC

Downstream 100 bases:

>100_bases
TGCCAACAATCATCGCACATAGTACATTCAGAGCATCGATAATCTCTGGATGTAAACATGATCACTTGGCACTCAATTCC
CTTCTCTGAACTTTCAACAC

Product: cAMP-binding protein

Products: NA

Alternate protein names: Crp Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Catabolite Gene Activator Protein; Crp/Fnr Family Transcriptional Regulator

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MHTSFIEQLQSFDFSESQIESLLAVAKPLELPTRHILINQGEMANSIYFVLEGLCHACYLTNDGKQYSKEFYWEQDWIIG
FESLIKNQASPYLLETLTPITMLELPMNAVIEWRASNNPLYLKLLETQLMHKENKERFMLLYTPEQRYQLFCEHYPDLEQ
RLNDNQIAAYLGITAISLSRIKGRINNS

Sequences:

>Translated_188_residues
MHTSFIEQLQSFDFSESQIESLLAVAKPLELPTRHILINQGEMANSIYFVLEGLCHACYLTNDGKQYSKEFYWEQDWIIG
FESLIKNQASPYLLETLTPITMLELPMNAVIEWRASNNPLYLKLLETQLMHKENKERFMLLYTPEQRYQLFCEHYPDLEQ
RLNDNQIAAYLGITAISLSRIKGRINNS
>Mature_188_residues
MHTSFIEQLQSFDFSESQIESLLAVAKPLELPTRHILINQGEMANSIYFVLEGLCHACYLTNDGKQYSKEFYWEQDWIIG
FESLIKNQASPYLLETLTPITMLELPMNAVIEWRASNNPLYLKLLETQLMHKENKERFMLLYTPEQRYQLFCEHYPDLEQ
RLNDNQIAAYLGITAISLSRIKGRINNS

Specific function: Unknown

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22016; Mature: 22016

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS00888 CNMP_BINDING_1 ; PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTSFIEQLQSFDFSESQIESLLAVAKPLELPTRHILINQGEMANSIYFVLEGLCHACYL
CCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHEE
TNDGKQYSKEFYWEQDWIIGFESLIKNQASPYLLETLTPITMLELPMNAVIEWRASNNPL
CCCCHHHHHHHCCCCCHHCCHHHHHCCCCCCHHHHHCCCHHHHHCCCCCEEEEECCCCCE
YLKLLETQLMHKENKERFMLLYTPEQRYQLFCEHYPDLEQRLNDNQIAAYLGITAISLSR
EEEEHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHH
IKGRINNS
HHHCCCCC
>Mature Secondary Structure
MHTSFIEQLQSFDFSESQIESLLAVAKPLELPTRHILINQGEMANSIYFVLEGLCHACYL
CCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHEE
TNDGKQYSKEFYWEQDWIIGFESLIKNQASPYLLETLTPITMLELPMNAVIEWRASNNPL
CCCCHHHHHHHCCCCCHHCCHHHHHCCCCCCHHHHHCCCHHHHHCCCCCEEEEECCCCCE
YLKLLETQLMHKENKERFMLLYTPEQRYQLFCEHYPDLEQRLNDNQIAAYLGITAISLSR
EEEEHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHH
IKGRINNS
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA