| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710697
Identifier: 218710697
GI number: 218710697
Start: 2943757
End: 2944047
Strand: Direct
Name: 218710697
Synonym: VS_2780
Alternate gene names: NA
Gene position: 2943757-2944047 (Clockwise)
Preceding gene: 218710696
Following gene: 218710698
Centisome position: 89.22
GC content: 42.61
Gene sequence:
>291_bases ATGTGGAAAAACACACCTAATAATGTGAAACGTAAAACAGGCTTCTTGCTTGGGCTGATGCTCATGTTGAGCGTGTTAGC AGCGACACATATTGTGGATATCGACCCACATCATCACTCTTCACATCATTGTGAGCTGTTTTCGATAAATCAGTTCATAA CGGCGCATTCACTTCCACAGATCCCAGAGTTCCATTCGGAATTTACTGTCGCTATCACAGAGTCAGTCGTTTCGTTACAG CGCCTGTATTTCGCTTATTTAGCACGTTCACCTCCTGTAAAGATTTCTTAA
Upstream 100 bases:
>100_bases GAGCCTTTAATAAGATATTCGCGTCTTTTTCGAGACCTGACCAAAGGATATTGTTATATTATAACAGTATCCTTTTTTAA TTCTGTGGTTAATCATCCTG
Downstream 100 bases:
>100_bases TTACCACTACTTTTTAATTAACCTTTATTCAGGAAAAAAACATGAAACCTACTATTCTAGCCGTTGTTATCGGTATGACT GTCTCTACTAATGTTCTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MWKNTPNNVKRKTGFLLGLMLMLSVLAATHIVDIDPHHHSSHHCELFSINQFITAHSLPQIPEFHSEFTVAITESVVSLQ RLYFAYLARSPPVKIS
Sequences:
>Translated_96_residues MWKNTPNNVKRKTGFLLGLMLMLSVLAATHIVDIDPHHHSSHHCELFSINQFITAHSLPQIPEFHSEFTVAITESVVSLQ RLYFAYLARSPPVKIS >Mature_96_residues MWKNTPNNVKRKTGFLLGLMLMLSVLAATHIVDIDPHHHSSHHCELFSINQFITAHSLPQIPEFHSEFTVAITESVVSLQ RLYFAYLARSPPVKIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10908; Mature: 10908
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWKNTPNNVKRKTGFLLGLMLMLSVLAATHIVDIDPHHHSSHHCELFSINQFITAHSLPQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHCCCCC IPEFHSEFTVAITESVVSLQRLYFAYLARSPPVKIS CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MWKNTPNNVKRKTGFLLGLMLMLSVLAATHIVDIDPHHHSSHHCELFSINQFITAHSLPQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHCCCCC IPEFHSEFTVAITESVVSLQRLYFAYLARSPPVKIS CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA